RNA–Protein interactions for RNA: YKL006C-A

SFT1, Transcript of Intra-Golgi v-SNARE, yeastyeast

Gene SFT1, Length 294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFT1YKL006C-A FOL3Q12676 427 aaPredicted RBP2.48□□□□□ -2.01
SFT1YKL006C-A MRPL25P23369 157 aa2.47□□□□□ -2.01
SFT1YKL006C-A VPS3P23643 1011 aa2.47□□□□□ -2.01
SFT1YKL006C-A RBK1P25332 333 aa2.47□□□□□ -2.01
SFT1YKL006C-A SKG6P32900 734 aaPredicted RBP2.47□□□□□ -2.01
SFT1YKL006C-A MMS21P38632 267 aa2.47□□□□□ -2.01
SFT1YKL006C-A TCD1P38756 429 aa2.47□□□□□ -2.01
SFT1YKL006C-A YPT35P38815 214 aaKnown RBP2.47□□□□□ -2.01
SFT1YKL006C-A FHL1P39521 936 aa2.47□□□□□ -2.01
SFT1YKL006C-A SHQ1P40486 507 aaPredicted RBP2.47□□□□□ -2.01
SFT1YKL006C-A AGP3P43548 558 aa2.47□□□□□ -2.01
SFT1YKL006C-A OTU1P43558 301 aa2.47□□□□□ -2.01
SFT1YKL006C-A CTK3P46963 296 aaPredicted RBP2.47□□□□□ -2.01
SFT1YKL006C-A MRX5P47007 382 aa2.47□□□□□ -2.01
SFT1YKL006C-A YJR030CP47101 745 aa2.47□□□□□ -2.01
SFT1YKL006C-A TRF5P48561 642 aaKnown RBP2.47□□□□□ -2.01
SFT1YKL006C-A KEL2P50090 882 aa2.47□□□□□ -2.01
SFT1YKL006C-A SEH1P53011 349 aaKnown RBP2.47□□□□□ -2.01
SFT1YKL006C-A YPS5P53057 165 aa2.47□□□□□ -2.01
SFT1YKL006C-A LSG1P53145 640 aaKnown RBP2.47□□□□□ -2.01
SFT1YKL006C-A PRM6Q04705 352 aa2.47□□□□□ -2.01
SFT1YKL006C-A BER1Q06688 274 aaKnown RBP2.47□□□□□ -2.01
SFT1YKL006C-A SLF1Q12034 447 aaKnown RBP2.47□□□□□ -2.01
SFT1YKL006C-A BTS1Q12051 335 aa2.47□□□□□ -2.01
SFT1YKL006C-A ATG31Q12421 196 aa2.47□□□□□ -2.01
SFT1YKL006C-A YCR024C-BQ3E7Z8 88 aa2.47□□□□□ -2.01
SFT1YKL006C-A ATP6P00854 259 aa2.46□□□□□ -2.02
SFT1YKL006C-A CBP6P07253 162 aaPredicted RBP2.46□□□□□ -2.02
SFT1YKL006C-A ZRC1P20107 442 aa2.46□□□□□ -2.02
SFT1YKL006C-A YSR3P23501 404 aa2.46□□□□□ -2.02
SFT1YKL006C-A RRT12P25381 491 aa2.46□□□□□ -2.02
SFT1YKL006C-A KRE6P32486 720 aa2.46□□□□□ -2.02
SFT1YKL006C-A SWD2P36104 329 aaPredicted RBP2.46□□□□□ -2.02
SFT1YKL006C-A SMF2P38778 549 aa2.46□□□□□ -2.02
SFT1YKL006C-A ALD5P40047 520 aaKnown RBP2.46□□□□□ -2.02
SFT1YKL006C-A COA1P40452 197 aa2.46□□□□□ -2.02
SFT1YKL006C-A YGL262WP53054 175 aa2.46□□□□□ -2.02
SFT1YKL006C-A FLC3P53121 802 aa2.46□□□□□ -2.02
SFT1YKL006C-A TRM112P53738 135 aaPredicted RBP2.46□□□□□ -2.02
SFT1YKL006C-A PGA2P53903 129 aa2.46□□□□□ -2.02
SFT1YKL006C-A ATG38Q05789 226 aaKnown RBP2.46□□□□□ -2.02
SFT1YKL006C-A YPR172WQ06608 200 aa2.46□□□□□ -2.02
SFT1YKL006C-A PBP4Q07362 185 aaKnown RBP2.46□□□□□ -2.02
SFT1YKL006C-A IES4Q08561 116 aa2.46□□□□□ -2.02
SFT1YKL006C-A YOR029WQ12243 111 aa2.46□□□□□ -2.02
SFT1YKL006C-A MEX67Q99257 599 aaKnown RBP2.46□□□□□ -2.02
SFT1YKL006C-A ADH1P00330 348 aaKnown RBP2.45□□□□□ -2.02
SFT1YKL006C-A RAD3P06839 778 aa2.45□□□□□ -2.02
SFT1YKL006C-A HPR1P17629 752 aaKnown RBP2.45□□□□□ -2.02
SFT1YKL006C-A YCR016WP25617 290 aaKnown RBP2.45□□□□□ -2.02
SFT1YKL006C-A RAD5P32849 1169 aaPredicted RBP2.45□□□□□ -2.02
SFT1YKL006C-A CBF5P33322 483 aaKnown RBP RIP-Chip data2.45□□□□□ -2.02not detected
SFT1YKL006C-A ANR2P36090 516 aaPredicted RBP2.45□□□□□ -2.02
SFT1YKL006C-A ECM8P38246 354 aa2.45□□□□□ -2.02
SFT1YKL006C-A BIG1P38813 335 aa2.45□□□□□ -2.02
SFT1YKL006C-A PFS1P38872 237 aa2.45□□□□□ -2.02
SFT1YKL006C-A IGD1P43598 195 aa2.45□□□□□ -2.02
SFT1YKL006C-A RAD17P48581 401 aa2.45□□□□□ -2.02
SFT1YKL006C-A TPS1Q00764 495 aaKnown RBP2.45□□□□□ -2.02
SFT1YKL006C-A SED5Q01590 340 aa2.45□□□□□ -2.02
SFT1YKL006C-A MYO5Q04439 1219 aaKnown RBP2.45□□□□□ -2.02
SFT1YKL006C-A YPR091CQ06833 770 aa2.45□□□□□ -2.02
SFT1YKL006C-A SLM3Q12093 417 aa2.45□□□□□ -2.02
SFT1YKL006C-A FCY22Q12119 530 aa2.45□□□□□ -2.02
SFT1YKL006C-A SAL1D6W196 494 aa2.44□□□□□ -2.02
SFT1YKL006C-A TDH2P00358 332 aaKnown RBP2.44□□□□□ -2.02
SFT1YKL006C-A MER1P16523 270 aa2.44□□□□□ -2.02
SFT1YKL006C-A MET16P18408 261 aaPredicted RBP2.44□□□□□ -2.02
SFT1YKL006C-A CHA1P25379 360 aaKnown RBP2.44□□□□□ -2.02
SFT1YKL006C-A RPS5P26783 225 aaKnown RBP2.44□□□□□ -2.02
SFT1YKL006C-A ZRT1P32804 376 aa2.44□□□□□ -2.02
SFT1YKL006C-A YKL071WP36086 256 aa2.44□□□□□ -2.02
SFT1YKL006C-A SIP3P38717 1229 aa2.44□□□□□ -2.02
SFT1YKL006C-A YHR035WP38769 630 aa2.44□□□□□ -2.02
SFT1YKL006C-A PTI1P39927 425 aaPredicted RBP2.44□□□□□ -2.02
SFT1YKL006C-A PMT4P46971 762 aa2.44□□□□□ -2.02
SFT1YKL006C-A YGR018CP53211 109 aa2.44□□□□□ -2.02
SFT1YKL006C-A IRC4Q03036 179 aa2.44□□□□□ -2.02
SFT1YKL006C-A YMR209CQ03648 457 aa2.44□□□□□ -2.02
SFT1YKL006C-A ADH6Q04894 360 aaKnown RBP2.44□□□□□ -2.02
SFT1YKL006C-A YLR283WQ05867 314 aa2.44□□□□□ -2.02
SFT1YKL006C-A SSQ1Q05931 657 aaPredicted RBP2.44□□□□□ -2.02
SFT1YKL006C-A MFG1Q07684 458 aa2.44□□□□□ -2.02
SFT1YKL006C-A SDO1Q07953 250 aaKnown RBP2.44□□□□□ -2.02
SFT1YKL006C-A ERP3Q12403 225 aa2.44□□□□□ -2.02
SFT1YKL006C-A PCL9Q12477 304 aa2.44□□□□□ -2.02
SFT1YKL006C-A JIP3O13555 125 aa2.43□□□□□ -2.02
SFT1YKL006C-A CDC36P06100 191 aaPredicted RBP2.43□□□□□ -2.02
SFT1YKL006C-A MATALPHA1P0CY06 175 aa2.43□□□□□ -2.02
SFT1YKL006C-A HMLALPHA1P0CY07 175 aa2.43□□□□□ -2.02
SFT1YKL006C-A VPS1P21576 704 aaKnown RBP2.43□□□□□ -2.02
SFT1YKL006C-A ITR2P30606 609 aa2.43□□□□□ -2.02
SFT1YKL006C-A ZIP1P31111 875 aa2.43□□□□□ -2.02
SFT1YKL006C-A CYM1P32898 989 aa2.43□□□□□ -2.02
SFT1YKL006C-A SPO23P33757 523 aa2.43□□□□□ -2.02
SFT1YKL006C-A RPC37P36121 282 aa2.43□□□□□ -2.02
SFT1YKL006C-A PRS4P38063 326 aaPredicted RBP2.43□□□□□ -2.02
SFT1YKL006C-A LDB7P38210 180 aa2.43□□□□□ -2.02
SFT1YKL006C-A GDS1P41913 522 aa2.43□□□□□ -2.02
SFT1YKL006C-A CGR1P53188 120 aa2.43□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms