RNA–Protein interactions for RNA: YIL137C

TMA108, Transcript of Ribosome-associated protein that is involved in ribosome biogenesis, yeast

Gene TMA108, Length 2,841 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TMA108	YIL137C	UBC11	P52492	156 aa		3.16	□□□□□ -1.9
TMA108	YIL137C	PEX31	P53203	462 aa		3.16	□□□□□ -1.9
TMA108	YIL137C	CTK1	Q03957	528 aa	Known RBP	3.16	□□□□□ -1.9
TMA108	YIL137C	CDA2	Q06703	312 aa		3.16	□□□□□ -1.9
TMA108	YIL137C	TAF10	Q12030	206 aa		3.16	□□□□□ -1.9
TMA108	YIL137C	WTM1	Q12363	437 aa	Known RBP	3.16	□□□□□ -1.9
TMA108	YIL137C	RAD50	P12753	1312 aa		3.16	□□□□□ -1.9
TMA108	YIL137C	VPH2	P32341	215 aa		3.15	□□□□□ -1.9
TMA108	YIL137C	MDH3	P32419	343 aa	Known RBP RIP-Chip data	3.15	□□□□□ -1.9	not detected
TMA108	YIL137C	PPZ2	P33329	710 aa		3.15	□□□□□ -1.9
TMA108	YIL137C	VAB2	P40003	282 aa		3.15	□□□□□ -1.9
TMA108	YIL137C	YAT2	P40017	923 aa		3.15	□□□□□ -1.9
TMA108	YIL137C	YPT11	P48559	417 aa		3.15	□□□□□ -1.9
TMA108	YIL137C	ZRG17	P53735	605 aa		3.15	□□□□□ -1.9
TMA108	YIL137C	RSM23	Q01163	450 aa		3.15	□□□□□ -1.9
TMA108	YIL137C	GIP3	Q03016	1276 aa		3.15	□□□□□ -1.9
TMA108	YIL137C	YMR315W	Q04869	349 aa	Known RBP	3.15	□□□□□ -1.9
TMA108	YIL137C	RIF2	Q06208	395 aa		3.15	□□□□□ -1.9
TMA108	YIL137C	SHS1	Q07657	551 aa		3.15	□□□□□ -1.9
TMA108	YIL137C	NSL1	Q12143	216 aa		3.15	□□□□□ -1.9
TMA108	YIL137C	SFM1	Q12314	213 aa		3.15	□□□□□ -1.9
TMA108	YIL137C	CPT1	P17898	393 aa		3.15	□□□□□ -1.91
TMA108	YIL137C	KIN3	P22209	435 aa		3.15	□□□□□ -1.91
TMA108	YIL137C	CHA1	P25379	360 aa	Known RBP	3.15	□□□□□ -1.91
TMA108	YIL137C	CYS4	P32582	507 aa	Known RBP	3.15	□□□□□ -1.91
TMA108	YIL137C	SHP1	P34223	423 aa		3.15	□□□□□ -1.91
TMA108	YIL137C	LYS12	P40495	371 aa	Known RBP	3.15	□□□□□ -1.91
TMA108	YIL137C	SEH1	P53011	349 aa	Known RBP	3.15	□□□□□ -1.91
TMA108	YIL137C	VPS62	P53285	467 aa		3.15	□□□□□ -1.91
TMA108	YIL137C	BUD32	P53323	261 aa		3.15	□□□□□ -1.91
TMA108	YIL137C	NUP49	Q02199	472 aa		3.15	□□□□□ -1.91
TMA108	YIL137C	ARO10	Q06408	635 aa		3.15	□□□□□ -1.91
TMA108	YIL137C	YNG1	Q08465	219 aa		3.15	□□□□□ -1.91
TMA108	YIL137C	APC9	Q12107	265 aa		3.15	□□□□□ -1.91
TMA108	YIL137C	RGT2	Q12300	763 aa		3.15	□□□□□ -1.91
TMA108	YIL137C	RRI1	Q12468	440 aa		3.15	□□□□□ -1.91
TMA108	YIL137C	CSR2	Q12734	1121 aa		3.15	□□□□□ -1.91
TMA108	YIL137C	VPS1	P21576	704 aa	Known RBP	3.15	□□□□□ -1.91
TMA108	YIL137C	MAK32	P23060	363 aa		3.15	□□□□□ -1.91
TMA108	YIL137C	TKL1	P23254	680 aa	Known RBP	3.15	□□□□□ -1.91
TMA108	YIL137C	YSR3	P23501	404 aa		3.15	□□□□□ -1.91
TMA108	YIL137C	SAT4	P25333	603 aa	Known RBP	3.15	□□□□□ -1.91
TMA108	YIL137C	NVJ1	P38881	321 aa		3.15	□□□□□ -1.91
TMA108	YIL137C	DDI1	P40087	428 aa		3.15	□□□□□ -1.91
TMA108	YIL137C	SFH5	P47008	294 aa		3.15	□□□□□ -1.91
TMA108	YIL137C	YJR054W	P47114	497 aa		3.15	□□□□□ -1.91
TMA108	YIL137C	GPI1	P53306	609 aa		3.15	□□□□□ -1.91
TMA108	YIL137C	PRM15	Q03262	622 aa		3.15	□□□□□ -1.91
TMA108	YIL137C	SNU56	Q03782	492 aa	Known RBP	3.15	□□□□□ -1.91
TMA108	YIL137C	SMP3	Q04174	516 aa		3.15	□□□□□ -1.91
TMA108	YIL137C	YPD1	Q07688	167 aa		3.15	□□□□□ -1.91
TMA108	YIL137C	SLF1	Q12034	447 aa	Known RBP	3.15	□□□□□ -1.91
TMA108	YIL137C	ATG34	Q12292	412 aa		3.15	□□□□□ -1.91
TMA108	YIL137C	SWM1	Q12379	170 aa		3.15	□□□□□ -1.91
TMA108	YIL137C	DET1	Q99288	334 aa	Known RBP	3.15	□□□□□ -1.91
TMA108	YIL137C	PET20	Q99373	253 aa		3.15	□□□□□ -1.91
TMA108	YIL137C	AI3	P03877	415 aa		3.14	□□□□□ -1.91
TMA108	YIL137C	MET2	P08465	486 aa		3.14	□□□□□ -1.91
TMA108	YIL137C	YPK1	P12688	680 aa	Known RBP	3.14	□□□□□ -1.91
TMA108	YIL137C	NUP2	P32499	720 aa		3.14	□□□□□ -1.91
TMA108	YIL137C	SOF1	P33750	489 aa	Known RBP	3.14	□□□□□ -1.91
TMA108	YIL137C	SRY1	P36007	326 aa		3.14	□□□□□ -1.91
TMA108	YIL137C	YBR241C	P38142	488 aa		3.14	□□□□□ -1.91
TMA108	YIL137C	ECM13	P38195	257 aa		3.14	□□□□□ -1.91
TMA108	YIL137C	TOS8	P53147	276 aa		3.14	□□□□□ -1.91
TMA108	YIL137C	YGR168C	P53293	376 aa		3.14	□□□□□ -1.91
TMA108	YIL137C	TPS1	Q00764	495 aa	Known RBP	3.14	□□□□□ -1.91
TMA108	YIL137C	SLD5	Q03406	294 aa		3.14	□□□□□ -1.91
TMA108	YIL137C	PRM6	Q04705	352 aa		3.14	□□□□□ -1.91
TMA108	YIL137C	PEX10	Q05568	337 aa		3.14	□□□□□ -1.91
TMA108	YIL137C	BER1	Q06688	274 aa	Known RBP	3.14	□□□□□ -1.91
TMA108	YIL137C	YDL057W	Q07379	328 aa		3.14	□□□□□ -1.91
TMA108	YIL137C	THP1	Q08231	455 aa		3.14	□□□□□ -1.91
TMA108	YIL137C	FRE7	Q12333	620 aa		3.14	□□□□□ -1.91
TMA108	YIL137C	RAS1	P01119	309 aa		3.14	□□□□□ -1.91
TMA108	YIL137C	KAR4	P25583	335 aa		3.14	□□□□□ -1.91
TMA108	YIL137C	LOS1	P33418	1100 aa	Predicted RBP	3.14	□□□□□ -1.91
TMA108	YIL137C	TIP20	P33891	701 aa		3.14	□□□□□ -1.91
TMA108	YIL137C	ECM8	P38246	354 aa		3.14	□□□□□ -1.91
TMA108	YIL137C	LEU5	P38702	357 aa		3.14	□□□□□ -1.91
TMA108	YIL137C	GDS1	P41913	522 aa		3.14	□□□□□ -1.91
TMA108	YIL137C	COS4	P43542	379 aa		3.14	□□□□□ -1.91
TMA108	YIL137C	FMP32	P43557	207 aa		3.14	□□□□□ -1.91
TMA108	YIL137C	YFL015C	P43578	164 aa		3.14	□□□□□ -1.91
TMA108	YIL137C	ALB1	P47019	175 aa	Predicted RBP	3.14	□□□□□ -1.91
TMA108	YIL137C	ADO1	P47143	340 aa	Known RBP	3.14	□□□□□ -1.91
TMA108	YIL137C	MNN10	P50108	393 aa	Known RBP	3.14	□□□□□ -1.91
TMA108	YIL137C	LST7	P53237	242 aa		3.14	□□□□□ -1.91
TMA108	YIL137C	YDL218W	Q07629	317 aa		3.14	□□□□□ -1.91
TMA108	YIL137C	RSA1	Q08932	381 aa		3.14	□□□□□ -1.91
TMA108	YIL137C	YDR018C	Q12185	396 aa		3.14	□□□□□ -1.91
TMA108	YIL137C	NPC2	Q12408	173 aa		3.14	□□□□□ -1.91
TMA108	YIL137C	CYC1	P00044	109 aa	Predicted RBP	3.13	□□□□□ -1.91
TMA108	YIL137C	RPS3	P05750	240 aa	Known RBP	3.13	□□□□□ -1.91
TMA108	YIL137C	QCR2	P07257	368 aa		3.13	□□□□□ -1.91
TMA108	YIL137C	RPL31A	P0C2H8	113 aa	Known RBP	3.13	□□□□□ -1.91
TMA108	YIL137C	COS2	P0CX12	379 aa		3.13	□□□□□ -1.91
TMA108	YIL137C	COS3	P0CX13	379 aa		3.13	□□□□□ -1.91
TMA108	YIL137C	SNA3	P14359	133 aa		3.13	□□□□□ -1.91
TMA108	YIL137C	TYR1	P20049	452 aa		3.13	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms