RNA–Protein interactions for RNA: YGR171C

MSM1, Transcript of Mitochondrial methionyl-tRNA synthetase (MetRS), yeastyeast

Gene MSM1, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSM1YGR171C HAM1P47119 197 aaKnown RBP3.04□□□□□ -1.92
MSM1YGR171C PXR1P53335 271 aaPredicted RBP3.04□□□□□ -1.92
MSM1YGR171C NOP13P53883 403 aaKnown RBP RIP-Chip data3.04□□□□□ -1.92not detected
MSM1YGR171C MTQ1P53944 314 aa3.04□□□□□ -1.92
MSM1YGR171C SED5Q01590 340 aa3.04□□□□□ -1.92
MSM1YGR171C IRC4Q03036 179 aa3.04□□□□□ -1.92
MSM1YGR171C SDO1Q07953 250 aaKnown RBP3.04□□□□□ -1.92
MSM1YGR171C BRX1Q08235 291 aaKnown RBP3.04□□□□□ -1.92
MSM1YGR171C YER078W-AQ3E7A2 54 aa3.04□□□□□ -1.92
MSM1YGR171C REV1P12689 985 aa3.03□□□□□ -1.92
MSM1YGR171C CPR3P25719 182 aa3.03□□□□□ -1.92
MSM1YGR171C ERG9P29704 444 aa3.03□□□□□ -1.92
MSM1YGR171C VMA6P32366 345 aaKnown RBP3.03□□□□□ -1.92
MSM1YGR171C MKK1P32490 508 aa3.03□□□□□ -1.92
MSM1YGR171C NUP2P32499 720 aa3.03□□□□□ -1.92
MSM1YGR171C YKL162CP36052 402 aa3.03□□□□□ -1.92
MSM1YGR171C BIG1P38813 335 aa3.03□□□□□ -1.92
MSM1YGR171C PFS1P38872 237 aa3.03□□□□□ -1.92
MSM1YGR171C MTW1P39731 289 aa3.03□□□□□ -1.92
MSM1YGR171C YIA6P40556 373 aa3.03□□□□□ -1.92
MSM1YGR171C TAD2P47058 250 aa3.03□□□□□ -1.92
MSM1YGR171C LSG1P53145 640 aaKnown RBP3.03□□□□□ -1.92
MSM1YGR171C MKC7P53379 596 aa3.03□□□□□ -1.92
MSM1YGR171C CUS2P53830 285 aaPredicted RBP3.03□□□□□ -1.92
MSM1YGR171C CWC25P53854 179 aaKnown RBP3.03□□□□□ -1.92
MSM1YGR171C YPL077CQ02831 240 aa3.03□□□□□ -1.92
MSM1YGR171C YDR209CQ03480 137 aa3.03□□□□□ -1.92
MSM1YGR171C TDA1Q03533 586 aa3.03□□□□□ -1.92
MSM1YGR171C YMR010WQ03687 405 aa3.03□□□□□ -1.92
MSM1YGR171C NNT1Q05874 261 aa3.03□□□□□ -1.92
MSM1YGR171C YTH1Q06102 208 aaPredicted RBP3.03□□□□□ -1.92
MSM1YGR171C DIB1Q06819 143 aaPredicted RBP3.03□□□□□ -1.92
MSM1YGR171C YOR387CQ08910 206 aa3.03□□□□□ -1.92
MSM1YGR171C YRA1Q12159 226 aaKnown RBP3.03□□□□□ -1.92
MSM1YGR171C YGK3Q12222 375 aaPredicted RBP3.03□□□□□ -1.92
MSM1YGR171C PCL9Q12477 304 aa3.03□□□□□ -1.92
MSM1YGR171C PET494P07390 489 aaPredicted RBP3.02□□□□□ -1.93
MSM1YGR171C MATALPHA1P0CY06 175 aa3.02□□□□□ -1.93
MSM1YGR171C HMLALPHA1P0CY07 175 aa3.02□□□□□ -1.93
MSM1YGR171C KAR9P32526 644 aa3.02□□□□□ -1.93
MSM1YGR171C MAK5P38112 773 aaPredicted RBP3.02□□□□□ -1.93
MSM1YGR171C LDB7P38210 180 aa3.02□□□□□ -1.93
MSM1YGR171C YHR035WP38769 630 aa3.02□□□□□ -1.93
MSM1YGR171C COX15P40086 486 aa3.02□□□□□ -1.93
MSM1YGR171C HAC1P41546 238 aa3.02□□□□□ -1.93
MSM1YGR171C YJR030CP47101 745 aa3.02□□□□□ -1.93
MSM1YGR171C OKP1P53298 406 aa3.02□□□□□ -1.93
MSM1YGR171C BIO4P53630 237 aa3.02□□□□□ -1.93
MSM1YGR171C HCH1P53834 153 aa3.02□□□□□ -1.93
MSM1YGR171C IMP4P53941 290 aaKnown RBP3.02□□□□□ -1.93
MSM1YGR171C YPL080CQ02826 108 aa3.02□□□□□ -1.93
MSM1YGR171C ADH2P00331 348 aaKnown RBP3.02□□□□□ -1.93
MSM1YGR171C YKL063CP35725 167 aa3.02□□□□□ -1.93
MSM1YGR171C YPT35P38815 214 aaKnown RBP3.02□□□□□ -1.93
MSM1YGR171C NDT80P38830 627 aa3.02□□□□□ -1.93
MSM1YGR171C EGD2P38879 174 aaKnown RBP3.02□□□□□ -1.93
MSM1YGR171C SUR2P38992 349 aa3.02□□□□□ -1.93
MSM1YGR171C DDI1P40087 428 aa3.02□□□□□ -1.93
MSM1YGR171C COA1P40452 197 aa3.02□□□□□ -1.93
MSM1YGR171C GLG2P47011 380 aa3.02□□□□□ -1.93
MSM1YGR171C BOR1P53838 576 aa3.02□□□□□ -1.93
MSM1YGR171C RRP17Q04031 235 aaPredicted RBP3.02□□□□□ -1.93
MSM1YGR171C CSM3Q04659 317 aa3.02□□□□□ -1.93
MSM1YGR171C PBA1Q05778 276 aa3.02□□□□□ -1.93
MSM1YGR171C SPO77Q06134 477 aa3.02□□□□□ -1.93
MSM1YGR171C YPR091CQ06833 770 aa3.02□□□□□ -1.93
MSM1YGR171C ASR1Q06834 288 aa3.02□□□□□ -1.93
MSM1YGR171C FCY22Q12119 530 aa3.02□□□□□ -1.93
MSM1YGR171C MSH5Q12175 901 aa3.02□□□□□ -1.93
MSM1YGR171C RIO1Q12196 484 aaKnown RBP3.02□□□□□ -1.93
MSM1YGR171C ATP6P00854 259 aa3.01□□□□□ -1.93
MSM1YGR171C HHF1P02309 103 aaKnown RBP3.01□□□□□ -1.93
MSM1YGR171C NAM2P11325 894 aa3.01□□□□□ -1.93
MSM1YGR171C SEN2P16658 377 aa3.01□□□□□ -1.93
MSM1YGR171C CKA2P19454 339 aa3.01□□□□□ -1.93
MSM1YGR171C ATP7P30902 174 aa3.01□□□□□ -1.93
MSM1YGR171C PRP18P33411 251 aaPredicted RBP3.01□□□□□ -1.93
MSM1YGR171C YBL059WP34224 193 aa3.01□□□□□ -1.93
MSM1YGR171C SEC72P39742 193 aaKnown RBP3.01□□□□□ -1.93
MSM1YGR171C YIL001WP40560 513 aa3.01□□□□□ -1.93
MSM1YGR171C CTK3P46963 296 aaPredicted RBP3.01□□□□□ -1.93
MSM1YGR171C YGR067CP53243 804 aa3.01□□□□□ -1.93
MSM1YGR171C APC9Q12107 265 aa3.01□□□□□ -1.93
MSM1YGR171C RRP42Q12277 265 aaPredicted RBP3.01□□□□□ -1.93
MSM1YGR171C THP2O13539 261 aaKnown RBP3□□□□□ -1.93
MSM1YGR171C RHO1P06780 209 aaKnown RBP3□□□□□ -1.93
MSM1YGR171C MATALPHA2P0CY08 210 aa3□□□□□ -1.93
MSM1YGR171C HMLALPHA2P0CY09 210 aa3□□□□□ -1.93
MSM1YGR171C SPT15P13393 240 aaKnown RBP3□□□□□ -1.93
MSM1YGR171C RNA15P25299 296 aaPredicted RBP3□□□□□ -1.93
MSM1YGR171C RPL16AP26784 199 aaKnown RBP3□□□□□ -1.93
MSM1YGR171C CSE1P33307 960 aa3□□□□□ -1.93
MSM1YGR171C SPO23P33757 523 aa3□□□□□ -1.93
MSM1YGR171C AVT5P38176 459 aa3□□□□□ -1.93
MSM1YGR171C PTH1P38876 190 aaKnown RBP3□□□□□ -1.93
MSM1YGR171C DFG10P40526 253 aa3□□□□□ -1.93
MSM1YGR171C YNL320WP42840 284 aa3□□□□□ -1.93
MSM1YGR171C YCH1P42937 148 aa3□□□□□ -1.93
MSM1YGR171C HSH155P49955 971 aaKnown RBP3□□□□□ -1.93
MSM1YGR171C CPD1P53314 239 aa3□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 63.6 ms