RNA–Protein interactions for RNA: YEL031W

SPF1, Transcript of P-type ATPase, ion transporter of the ER membrane, yeastyeast

Gene SPF1, Length 3,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPF1YEL031W YML003WP0CF16 290 aa2.24□□□□□ -2.05
SPF1YEL031W TY1A-AP0CX57 440 aa2.24□□□□□ -2.05
SPF1YEL031W TY1A-PR1P0CX58 440 aa2.24□□□□□ -2.05
SPF1YEL031W TY1A-ORP0CX59 440 aa2.24□□□□□ -2.05
SPF1YEL031W TY1A-PR2P0CX60 440 aa2.24□□□□□ -2.05
SPF1YEL031W TY1A-DR5P0CX65 440 aa2.24□□□□□ -2.05
SPF1YEL031W TY1A-ER2P0CX66 440 aa2.24□□□□□ -2.05
SPF1YEL031W TY1A-GR3P0CX67 440 aa2.24□□□□□ -2.05
SPF1YEL031W TY1A-LR1P0CX68 440 aa2.24□□□□□ -2.05
SPF1YEL031W TY1A-MR2P0CX69 440 aa2.24□□□□□ -2.05
SPF1YEL031W MRP1P10662 321 aaKnown RBP2.24□□□□□ -2.05
SPF1YEL031W RSA4P25382 515 aaKnown RBP2.24□□□□□ -2.05
SPF1YEL031W PEX34P25584 144 aa2.24□□□□□ -2.05
SPF1YEL031W YIH1P25637 258 aa2.24□□□□□ -2.05
SPF1YEL031W FUN26P31381 517 aa2.24□□□□□ -2.05
SPF1YEL031W SUA5P32579 426 aa2.24□□□□□ -2.05
SPF1YEL031W CAT2P32796 670 aaKnown RBP2.24□□□□□ -2.05
SPF1YEL031W SHP1P34223 423 aa2.24□□□□□ -2.05
SPF1YEL031W ASC1P38011 319 aaKnown RBP2.24□□□□□ -2.05
SPF1YEL031W AHP1P38013 176 aaKnown RBP2.24□□□□□ -2.05
SPF1YEL031W ZTA1P38230 334 aaKnown RBP2.24□□□□□ -2.05
SPF1YEL031W CUE1P38428 203 aa2.24□□□□□ -2.05
SPF1YEL031W VAB2P40003 282 aa2.24□□□□□ -2.05
SPF1YEL031W TY1A-JR2P47099 440 aa2.24□□□□□ -2.05
SPF1YEL031W HXT16P47185 567 aa2.24□□□□□ -2.05
SPF1YEL031W NUP57P48837 541 aa2.24□□□□□ -2.05
SPF1YEL031W SEH1P53011 349 aaKnown RBP2.24□□□□□ -2.05
SPF1YEL031W YGR017WP53210 297 aa2.24□□□□□ -2.05
SPF1YEL031W PAU12P53343 120 aa2.24□□□□□ -2.05
SPF1YEL031W YNR065CP53751 1116 aa2.24□□□□□ -2.05
SPF1YEL031W TRM44Q02648 567 aaKnown RBP2.24□□□□□ -2.05
SPF1YEL031W MSC1Q03104 513 aa2.24□□□□□ -2.05
SPF1YEL031W TY1A-DR1Q03856 440 aa2.24□□□□□ -2.05
SPF1YEL031W TY1A-ML1Q04706 440 aaKnown RBP2.24□□□□□ -2.05
SPF1YEL031W YMR315WQ04869 349 aaKnown RBP2.24□□□□□ -2.05
SPF1YEL031W BER1Q06688 274 aaKnown RBP2.24□□□□□ -2.05
SPF1YEL031W DDC1Q08949 612 aa2.24□□□□□ -2.05
SPF1YEL031W LEA1Q08963 238 aaPredicted RBP2.24□□□□□ -2.05
SPF1YEL031W SLF1Q12034 447 aaKnown RBP2.24□□□□□ -2.05
SPF1YEL031W TY1A-BRQ12217 440 aa2.24□□□□□ -2.05
SPF1YEL031W PAA1Q12447 191 aaKnown RBP2.24□□□□□ -2.05
SPF1YEL031W TY1A-NL2Q12470 440 aa2.24□□□□□ -2.05
SPF1YEL031W FRE6Q12473 712 aa2.24□□□□□ -2.05
SPF1YEL031W AIM45Q12480 344 aaKnown RBP2.24□□□□□ -2.05
SPF1YEL031W TY1A-GR2Q12485 440 aa2.24□□□□□ -2.05
SPF1YEL031W CKA1P15790 372 aa2.24□□□□□ -2.05
SPF1YEL031W PET9P18239 318 aaKnown RBP2.24□□□□□ -2.05
SPF1YEL031W EHD3P28817 500 aa2.24□□□□□ -2.05
SPF1YEL031W NAB2P32505 525 aaKnown RBP RIP-Chip data2.24□□□□□ -2.05not detected
SPF1YEL031W SDH3P33421 198 aa2.24□□□□□ -2.05
SPF1YEL031W MTH1P35198 433 aa2.24□□□□□ -2.05
SPF1YEL031W YNK1P36010 153 aaKnown RBP2.24□□□□□ -2.05
SPF1YEL031W YKL077WP36081 392 aa2.24□□□□□ -2.05
SPF1YEL031W HTD2P38790 280 aaKnown RBP2.24□□□□□ -2.05
SPF1YEL031W EDC3P39998 551 aaKnown RBP2.24□□□□□ -2.05
SPF1YEL031W SPC25P40014 221 aa2.24□□□□□ -2.05
SPF1YEL031W YIL166CP40445 542 aa2.24□□□□□ -2.05
SPF1YEL031W RPL10P41805 221 aaKnown RBP2.24□□□□□ -2.05
SPF1YEL031W IME4P41833 600 aa2.24□□□□□ -2.05
SPF1YEL031W MEP2P41948 499 aa2.24□□□□□ -2.05
SPF1YEL031W GSM1P42950 618 aa2.24□□□□□ -2.05
SPF1YEL031W TAD2P47058 250 aa2.24□□□□□ -2.05
SPF1YEL031W FAA4P47912 694 aaKnown RBP2.24□□□□□ -2.05
SPF1YEL031W FOL2P51601 243 aaKnown RBP2.24□□□□□ -2.05
SPF1YEL031W FLC3P53121 802 aa2.24□□□□□ -2.05
SPF1YEL031W APJ1P53940 528 aa2.24□□□□□ -2.05
SPF1YEL031W ARG5,6Q01217 863 aa2.24□□□□□ -2.05
SPF1YEL031W GIP3Q03016 1276 aa2.24□□□□□ -2.05
SPF1YEL031W GOT1Q03554 138 aa2.24□□□□□ -2.05
SPF1YEL031W PLB2Q03674 706 aa2.24□□□□□ -2.05
SPF1YEL031W THI74Q04083 370 aa2.24□□□□□ -2.05
SPF1YEL031W TY1A-MR1Q04215 440 aa2.24□□□□□ -2.05
SPF1YEL031W BOP2Q06150 570 aa2.24□□□□□ -2.05
SPF1YEL031W YOR385WQ08909 290 aa2.24□□□□□ -2.05
SPF1YEL031W YDL176WQ12027 708 aa2.24□□□□□ -2.05
SPF1YEL031W TY1A-BLQ12266 440 aa2.24□□□□□ -2.05
SPF1YEL031W BMT6Q12291 365 aa2.24□□□□□ -2.05
SPF1YEL031W MHT1Q12525 324 aa2.24□□□□□ -2.05
SPF1YEL031W YKL018C-AQ3E7A7 99 aa2.24□□□□□ -2.05
SPF1YEL031W PRC1P00729 532 aa2.23□□□□□ -2.05
SPF1YEL031W HTB1P02293 131 aaKnown RBP2.23□□□□□ -2.05
SPF1YEL031W HTB2P02294 131 aa2.23□□□□□ -2.05
SPF1YEL031W HIS5P07172 385 aa2.23□□□□□ -2.05
SPF1YEL031W HAP3P13434 144 aa2.23□□□□□ -2.05
SPF1YEL031W PDX1P16451 410 aa2.23□□□□□ -2.05
SPF1YEL031W DAL81P21657 970 aa2.23□□□□□ -2.05
SPF1YEL031W AFT1P22149 690 aa2.23□□□□□ -2.05
SPF1YEL031W NAR1P23503 491 aaKnown RBP2.23□□□□□ -2.05
SPF1YEL031W YCR101CP25607 182 aa2.23□□□□□ -2.05
SPF1YEL031W GAC1P28006 793 aa2.23□□□□□ -2.05
SPF1YEL031W MRP20P32387 263 aa2.23□□□□□ -2.05
SPF1YEL031W PAU2P32612 120 aa2.23□□□□□ -2.05
SPF1YEL031W BNA4P38169 460 aa2.23□□□□□ -2.05
SPF1YEL031W SHE1P38200 338 aa2.23□□□□□ -2.05
SPF1YEL031W YHR033WP38690 423 aa2.23□□□□□ -2.05
SPF1YEL031W PEX28P38848 579 aa2.23□□□□□ -2.05
SPF1YEL031W CFD1P40558 293 aa2.23□□□□□ -2.05
SPF1YEL031W SNM1P40993 198 aa2.23□□□□□ -2.05
SPF1YEL031W MPA43P53583 542 aaPredicted RBP2.23□□□□□ -2.05
SPF1YEL031W FRE4P53746 719 aa2.23□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 71.2 ms