RNA–Protein interactions for RNA: YDR351W

SBE2, Transcript of Protein required for bud growth, yeast

Gene SBE2, Length 2,595 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SBE2	YDR351W	LSM12	P38828	187 aa	Known RBP	4.11	□□□□□ -1.75
SBE2	YDR351W	FMP52	P40008	231 aa		4.11	□□□□□ -1.75
SBE2	YDR351W	GAT1	P43574	510 aa		4.11	□□□□□ -1.75
SBE2	YDR351W	TIS11	P47977	285 aa		4.11	□□□□□ -1.75
SBE2	YDR351W	PEX31	P53203	462 aa		4.11	□□□□□ -1.75
SBE2	YDR351W	YGR079W	P53249	370 aa		4.11	□□□□□ -1.75
SBE2	YDR351W	SAE3	P89114	91 aa		4.11	□□□□□ -1.75
SBE2	YDR351W	SDH1	Q00711	640 aa		4.11	□□□□□ -1.75
SBE2	YDR351W	NUP53	Q03790	475 aa		4.11	□□□□□ -1.75
SBE2	YDR351W	NOC4	Q06512	552 aa	Predicted RBP	4.11	□□□□□ -1.75
SBE2	YDR351W	YLR046C	Q12253	270 aa		4.11	□□□□□ -1.75
SBE2	YDR351W	TPO4	Q12256	659 aa		4.11	□□□□□ -1.75
SBE2	YDR351W	FOL3	Q12676	427 aa	Predicted RBP	4.11	□□□□□ -1.75
SBE2	YDR351W	TRM732	Q03496	1420 aa		4.11	□□□□□ -1.75
SBE2	YDR351W	RPL12A	P0CX53	165 aa	Known RBP	4.11	□□□□□ -1.75
SBE2	YDR351W	RPL12B	P0CX54	165 aa		4.11	□□□□□ -1.75
SBE2	YDR351W	SDH2	P21801	266 aa		4.11	□□□□□ -1.75
SBE2	YDR351W	RPS1B	P23248	255 aa	Known RBP	4.11	□□□□□ -1.75
SBE2	YDR351W	SUA7	P29055	345 aa	Predicted RBP	4.11	□□□□□ -1.75
SBE2	YDR351W	PCF11	P39081	626 aa	Predicted RBP	4.11	□□□□□ -1.75
SBE2	YDR351W	MBB1	P39534	108 aa		4.11	□□□□□ -1.75
SBE2	YDR351W	AIM2	P39721	246 aa		4.11	□□□□□ -1.75
SBE2	YDR351W	UFD1	P53044	361 aa		4.11	□□□□□ -1.75
SBE2	YDR351W	TIM8	P57744	87 aa		4.11	□□□□□ -1.75
SBE2	YDR351W	RHO3	Q00245	231 aa	Known RBP	4.11	□□□□□ -1.75
SBE2	YDR351W	YPL068C	Q02749	293 aa		4.11	□□□□□ -1.75
SBE2	YDR351W	YDR132C	Q03900	495 aa		4.11	□□□□□ -1.75
SBE2	YDR351W	DOT1	Q04089	582 aa	Known RBP	4.11	□□□□□ -1.75
SBE2	YDR351W	SMP3	Q04174	516 aa		4.11	□□□□□ -1.75
SBE2	YDR351W	FRE7	Q12333	620 aa		4.11	□□□□□ -1.75
SBE2	YDR351W	TRM13	Q12383	476 aa		4.11	□□□□□ -1.75
SBE2	YDR351W	GAR1	P28007	205 aa	Known RBP	4.1	□□□□□ -1.75
SBE2	YDR351W	PPZ2	P33329	710 aa		4.1	□□□□□ -1.75
SBE2	YDR351W	SOR1	P35497	357 aa	Known RBP	4.1	□□□□□ -1.75
SBE2	YDR351W	AIM24	P47127	394 aa		4.1	□□□□□ -1.75
SBE2	YDR351W	MSY1	P48527	492 aa		4.1	□□□□□ -1.75
SBE2	YDR351W	GTR2	P53290	341 aa		4.1	□□□□□ -1.75
SBE2	YDR351W	COS1	P53822	381 aa		4.1	□□□□□ -1.75
SBE2	YDR351W	IMP4	P53941	290 aa	Known RBP	4.1	□□□□□ -1.75
SBE2	YDR351W	DID2	P69771	204 aa		4.1	□□□□□ -1.75
SBE2	YDR351W	VBA1	Q04301	562 aa		4.1	□□□□□ -1.75
SBE2	YDR351W	YDR109C	Q04585	715 aa		4.1	□□□□□ -1.75
SBE2	YDR351W	GAS2	Q06135	555 aa		4.1	□□□□□ -1.75
SBE2	YDR351W	MRI1	Q06489	411 aa	Known RBP	4.1	□□□□□ -1.75
SBE2	YDR351W	MHR1	Q06630	226 aa		4.1	□□□□□ -1.75
SBE2	YDR351W	SOR2	Q07786	357 aa		4.1	□□□□□ -1.75
SBE2	YDR351W	YOR283W	Q12040	230 aa	Known RBP	4.1	□□□□□ -1.75
SBE2	YDR351W	NCA2	Q12374	616 aa		4.1	□□□□□ -1.75
SBE2	YDR351W	GPA2	P10823	449 aa		4.1	□□□□□ -1.75
SBE2	YDR351W	YPK1	P12688	680 aa	Known RBP	4.1	□□□□□ -1.75
SBE2	YDR351W	SLY1	P22213	666 aa		4.1	□□□□□ -1.75
SBE2	YDR351W	RNA14	P25298	677 aa	Known RBP	4.1	□□□□□ -1.75
SBE2	YDR351W	MGT1	P26188	188 aa		4.1	□□□□□ -1.75
SBE2	YDR351W	NTF2	P33331	125 aa	Known RBP	4.1	□□□□□ -1.75
SBE2	YDR351W	TSA1	P34760	196 aa	Known RBP	4.1	□□□□□ -1.75
SBE2	YDR351W	ARP1	P38696	384 aa		4.1	□□□□□ -1.75
SBE2	YDR351W	YHR112C	P38716	378 aa		4.1	□□□□□ -1.75
SBE2	YDR351W	RRP4	P38792	359 aa	Known RBP	4.1	□□□□□ -1.75
SBE2	YDR351W	IPI1	P38803	334 aa	Predicted RBP	4.1	□□□□□ -1.75
SBE2	YDR351W	PGD1	P40356	397 aa		4.1	□□□□□ -1.75
SBE2	YDR351W	CTK3	P46963	296 aa	Predicted RBP	4.1	□□□□□ -1.75
SBE2	YDR351W	IRC18	P47056	224 aa		4.1	□□□□□ -1.75
SBE2	YDR351W	RBL2	P48606	106 aa	Known RBP	4.1	□□□□□ -1.75
SBE2	YDR351W	ALG13	P53178	202 aa		4.1	□□□□□ -1.75
SBE2	YDR351W	YGR017W	P53210	297 aa		4.1	□□□□□ -1.75
SBE2	YDR351W	MPA43	P53583	542 aa	Predicted RBP	4.1	□□□□□ -1.75
SBE2	YDR351W	ASI2	P53895	289 aa		4.1	□□□□□ -1.75
SBE2	YDR351W	CDC14	Q00684	551 aa		4.1	□□□□□ -1.75
SBE2	YDR351W	YDR476C	Q03362	224 aa		4.1	□□□□□ -1.75
SBE2	YDR351W	PKR1	Q03880	122 aa	Known RBP	4.1	□□□□□ -1.75
SBE2	YDR351W	YML096W	Q04489	525 aa		4.1	□□□□□ -1.75
SBE2	YDR351W	GRX8	Q05926	109 aa		4.1	□□□□□ -1.75
SBE2	YDR351W	YOR214C	Q12282	236 aa		4.1	□□□□□ -1.75
SBE2	YDR351W	MRX4	Q12467	430 aa		4.1	□□□□□ -1.75
SBE2	YDR351W	ECM3	Q99252	613 aa		4.1	□□□□□ -1.75
SBE2	YDR351W	RPP1A	P05318	106 aa	Predicted RBP	4.09	□□□□□ -1.75
SBE2	YDR351W	CDC7	P06243	507 aa		4.09	□□□□□ -1.75
SBE2	YDR351W	CTA1	P15202	515 aa		4.09	□□□□□ -1.75
SBE2	YDR351W	MRPS5	P33759	307 aa		4.09	□□□□□ -1.75
SBE2	YDR351W	APL3	P38065	1025 aa		4.09	□□□□□ -1.75
SBE2	YDR351W	RBG1	P39729	369 aa		4.09	□□□□□ -1.75
SBE2	YDR351W	SMB1	P40018	196 aa	Known RBP	4.09	□□□□□ -1.75
SBE2	YDR351W	RPL10	P41805	221 aa	Known RBP	4.09	□□□□□ -1.75
SBE2	YDR351W	TAD2	P47058	250 aa		4.09	□□□□□ -1.75
SBE2	YDR351W	YJL016W	P47072	561 aa		4.09	□□□□□ -1.75
SBE2	YDR351W	NBP1	P52919	319 aa	Predicted RBP	4.09	□□□□□ -1.75
SBE2	YDR351W	UBC7	Q02159	165 aa		4.09	□□□□□ -1.75
SBE2	YDR351W	CTK1	Q03957	528 aa	Known RBP	4.09	□□□□□ -1.75
SBE2	YDR351W	SNT309	Q06091	175 aa	Predicted RBP	4.09	□□□□□ -1.75
SBE2	YDR351W	ENB1	Q08299	606 aa		4.09	□□□□□ -1.75
SBE2	YDR351W	APC9	Q12107	265 aa		4.09	□□□□□ -1.75
SBE2	YDR351W	TPI1	P00942	248 aa	Known RBP	4.09	□□□□□ -1.75
SBE2	YDR351W	RPL28	P02406	149 aa	Known RBP	4.09	□□□□□ -1.75
SBE2	YDR351W	COR1	P07256	457 aa		4.09	□□□□□ -1.75
SBE2	YDR351W	EXO70	P19658	623 aa		4.09	□□□□□ -1.75
SBE2	YDR351W	SEC22	P22214	214 aa		4.09	□□□□□ -1.75
SBE2	YDR351W	PMT2	P31382	759 aa		4.09	□□□□□ -1.75
SBE2	YDR351W	GDA1	P32621	518 aa		4.09	□□□□□ -1.75
SBE2	YDR351W	JEN1	P36035	616 aa		4.09	□□□□□ -1.75
SBE2	YDR351W	SRL3	P36167	246 aa		4.09	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms