RNA–Protein interactions for RNA: YPL085W

SEC16, Transcript of COPII vesicle coat protein required for ER transport vesicle budding, yeastyeast

Gene SEC16, Length 6,588 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC16YPL085W RFA2P26754 273 aaKnown RBP2.07□□□□□ -2.08
SEC16YPL085W EHD3P28817 500 aa2.07□□□□□ -2.08
SEC16YPL085W YBR139WP38109 508 aa2.07□□□□□ -2.08
SEC16YPL085W LNP1P38878 278 aa2.07□□□□□ -2.08
SEC16YPL085W NIF3P53081 288 aa2.07□□□□□ -2.08
SEC16YPL085W ISU1Q03020 165 aa2.07□□□□□ -2.08
SEC16YPL085W YPL162CQ12042 273 aa2.07□□□□□ -2.08
SEC16YPL085W TSC13Q99190 310 aa2.07□□□□□ -2.08
SEC16YPL085W MRP1P10662 321 aaKnown RBP2.07□□□□□ -2.08
SEC16YPL085W ATG15P25641 520 aa2.07□□□□□ -2.08
SEC16YPL085W FUN19P28003 413 aaPredicted RBP2.07□□□□□ -2.08
SEC16YPL085W SOR1P35497 357 aaKnown RBP2.07□□□□□ -2.08
SEC16YPL085W RCN1P36054 211 aa2.07□□□□□ -2.08
SEC16YPL085W YHR127WP38833 243 aaKnown RBP2.07□□□□□ -2.08
SEC16YPL085W PZF1P39933 429 aa2.07□□□□□ -2.08
SEC16YPL085W TED1P40533 473 aa2.07□□□□□ -2.08
SEC16YPL085W GAT1P43574 510 aa2.07□□□□□ -2.08
SEC16YPL085W RRT5P43607 289 aa2.07□□□□□ -2.08
SEC16YPL085W XPT1P47165 209 aa2.07□□□□□ -2.08
SEC16YPL085W AMA1P50082 593 aa2.07□□□□□ -2.08
SEC16YPL085W YGL204CP53089 101 aa2.07□□□□□ -2.08
SEC16YPL085W HHO1P53551 258 aa2.07□□□□□ -2.08
SEC16YPL085W YNL033WP53964 284 aa2.07□□□□□ -2.08
SEC16YPL085W YNL019CP53975 284 aa2.07□□□□□ -2.08
SEC16YPL085W RSM24Q03976 319 aa2.07□□□□□ -2.08
SEC16YPL085W YDR286CQ05530 114 aa2.07□□□□□ -2.08
SEC16YPL085W SOR2Q07786 357 aa2.07□□□□□ -2.08
SEC16YPL085W YDL109CQ12103 647 aa2.07□□□□□ -2.08
SEC16YPL085W LCB4Q12246 624 aa2.07□□□□□ -2.08
SEC16YPL085W DGK1Q12382 290 aa2.07□□□□□ -2.08
SEC16YPL085W FRE6Q12473 712 aa2.07□□□□□ -2.08
SEC16YPL085W SEC53P07283 254 aaKnown RBP2.07□□□□□ -2.08
SEC16YPL085W ACB1P31787 87 aa2.07□□□□□ -2.08
SEC16YPL085W YMC1P32331 307 aa2.07□□□□□ -2.08
SEC16YPL085W PRS2P38620 318 aaKnown RBP2.07□□□□□ -2.08
SEC16YPL085W SOP4P39543 234 aaPredicted RBP2.07□□□□□ -2.08
SEC16YPL085W PEP8P40335 379 aa2.07□□□□□ -2.08
SEC16YPL085W ASG7P46993 209 aa2.07□□□□□ -2.08
SEC16YPL085W YJL043WP47053 257 aa2.07□□□□□ -2.08
SEC16YPL085W TAH11P47112 604 aa2.07□□□□□ -2.08
SEC16YPL085W SAY1P53324 424 aa2.07□□□□□ -2.08
SEC16YPL085W BSC5P53755 489 aa2.07□□□□□ -2.08
SEC16YPL085W NSG2P53898 299 aa2.07□□□□□ -2.08
SEC16YPL085W APJ1P53940 528 aa2.07□□□□□ -2.08
SEC16YPL085W COQ10Q08058 207 aa2.07□□□□□ -2.08
SEC16YPL085W DAP1Q12091 152 aa2.07□□□□□ -2.08
SEC16YPL085W YOL114CQ12322 202 aa2.07□□□□□ -2.08
SEC16YPL085W ORT1Q12375 292 aa2.07□□□□□ -2.08
SEC16YPL085W TFB5Q3E7C1 72 aaPredicted RBP2.07□□□□□ -2.08
SEC16YPL085W RPL15AP05748 204 aaKnown RBP2.07□□□□□ -2.08
SEC16YPL085W ACO1P19414 778 aaKnown RBP RIP-Chip data2.07□□□□□ -2.08not detected
SEC16YPL085W ERG1P32476 496 aaKnown RBP2.07□□□□□ -2.08
SEC16YPL085W MDL1P33310 695 aa2.07□□□□□ -2.08
SEC16YPL085W SWD2P36104 329 aaPredicted RBP2.07□□□□□ -2.08
SEC16YPL085W RRP4P38792 359 aaKnown RBP2.07□□□□□ -2.08
SEC16YPL085W ERP5P38819 212 aa2.07□□□□□ -2.08
SEC16YPL085W PAN6P40459 309 aa2.07□□□□□ -2.08
SEC16YPL085W SHR5P41912 237 aa2.07□□□□□ -2.08
SEC16YPL085W FMP32P43557 207 aa2.07□□□□□ -2.08
SEC16YPL085W UFD1P53044 361 aa2.07□□□□□ -2.08
SEC16YPL085W YGR127WP53275 312 aa2.07□□□□□ -2.08
SEC16YPL085W TPO2P53283 614 aa2.07□□□□□ -2.08
SEC16YPL085W RPL15BP54780 204 aaPredicted RBP2.07□□□□□ -2.08
SEC16YPL085W YET3Q07451 203 aa2.07□□□□□ -2.08
SEC16YPL085W YPQ1Q12010 308 aa2.07□□□□□ -2.08
SEC16YPL085W SUS1Q6WNK7 96 aa2.07□□□□□ -2.08
SEC16YPL085W DET1Q99288 334 aaKnown RBP2.07□□□□□ -2.08
SEC16YPL085W YHR214C-DP0CX93 97 aa2.06□□□□□ -2.08
SEC16YPL085W HEM13P11353 328 aaKnown RBP2.06□□□□□ -2.08
SEC16YPL085W PRR1P28708 518 aa2.06□□□□□ -2.08
SEC16YPL085W TPO5P36029 618 aa2.06□□□□□ -2.08
SEC16YPL085W UTP30P36144 274 aaKnown RBP2.06□□□□□ -2.08
SEC16YPL085W MTL1P53214 551 aa2.06□□□□□ -2.08
SEC16YPL085W SCW4P53334 386 aaKnown RBP2.06□□□□□ -2.08
SEC16YPL085W MRPL50P53724 139 aa2.06□□□□□ -2.08
SEC16YPL085W ARX1Q03862 593 aaKnown RBP2.06□□□□□ -2.08
SEC16YPL085W UPS1Q05776 175 aa2.06□□□□□ -2.08
SEC16YPL085W IRC19Q07843 230 aa2.06□□□□□ -2.08
SEC16YPL085W SAM4Q08985 325 aaKnown RBP2.06□□□□□ -2.08
SEC16YPL085W RPS8AP0CX39 200 aaKnown RBP2.06□□□□□ -2.08
SEC16YPL085W RPS8BP0CX40 200 aaKnown RBP2.06□□□□□ -2.08
SEC16YPL085W PET122P10355 254 aa2.06□□□□□ -2.08
SEC16YPL085W TRR1P29509 319 aaKnown RBP2.06□□□□□ -2.08
SEC16YPL085W PDC2P32896 925 aa2.06□□□□□ -2.08
SEC16YPL085W RRP3P38712 501 aaKnown RBP2.06□□□□□ -2.08
SEC16YPL085W PUG1P40100 303 aa2.06□□□□□ -2.08
SEC16YPL085W PFS2P42841 465 aaKnown RBP2.06□□□□□ -2.08
SEC16YPL085W SLS1P42900 643 aa2.06□□□□□ -2.08
SEC16YPL085W SAM37P50110 327 aa2.06□□□□□ -2.08
SEC16YPL085W RMR1P53060 241 aa2.06□□□□□ -2.08
SEC16YPL085W SWS2P53937 143 aa2.06□□□□□ -2.08
SEC16YPL085W ARA2Q04212 335 aa2.06□□□□□ -2.08
SEC16YPL085W MRX9Q07349 420 aaKnown RBP2.06□□□□□ -2.08
SEC16YPL085W SDO1Q07953 250 aaKnown RBP2.06□□□□□ -2.08
SEC16YPL085W MCA1Q08601 432 aa2.06□□□□□ -2.08
SEC16YPL085W RLM1Q12224 676 aa2.06□□□□□ -2.08
SEC16YPL085W RMD5Q12508 421 aa2.06□□□□□ -2.08
SEC16YPL085W RPL7AP05737 244 aaKnown RBP2.06□□□□□ -2.08
SEC16YPL085W PHO2P07269 559 aa2.06□□□□□ -2.08
SEC16YPL085W ADK2P26364 225 aa2.06□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 56.6 ms