RNA–Protein interactions for RNA: YMR050C

YMR050C, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YMR050C, Length 5,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YMR050CYMR050C PUF2Q12221 1075 aaKnown RBP RIP-Chip data2.46□□□□□ -2.02not detected
YMR050CYMR050C HBN1Q96VH4 193 aa2.46□□□□□ -2.02
YMR050CYMR050C GCR1P07261 785 aa2.45□□□□□ -2.02
YMR050CYMR050C PUT2P07275 575 aa2.45□□□□□ -2.02
YMR050CYMR050C TY2A-LR1P0C2J4 438 aa2.45□□□□□ -2.02
YMR050CYMR050C TY2A-FP0CX61 438 aa2.45□□□□□ -2.02
YMR050CYMR050C TY2A-GR2P0CX62 438 aa2.45□□□□□ -2.02
YMR050CYMR050C PET9P18239 318 aaKnown RBP2.45□□□□□ -2.02
YMR050CYMR050C AMD2P22580 549 aa2.45□□□□□ -2.02
YMR050CYMR050C TY2A-CP25383 438 aa2.45□□□□□ -2.02
YMR050CYMR050C COQ3P27680 312 aa2.45□□□□□ -2.02
YMR050CYMR050C SUR1P33300 382 aa2.45□□□□□ -2.02
YMR050CYMR050C SHM2P37291 469 aaKnown RBP2.45□□□□□ -2.02
YMR050CYMR050C YHB1P39676 399 aaKnown RBP2.45□□□□□ -2.02
YMR050CYMR050C AVT7P40501 490 aa2.45□□□□□ -2.02
YMR050CYMR050C OST3P48439 350 aa2.45□□□□□ -2.02
YMR050CYMR050C AVT4P50944 713 aa2.45□□□□□ -2.02
YMR050CYMR050C MEP3P53390 489 aa2.45□□□□□ -2.02
YMR050CYMR050C TY2A-DR2Q03483 438 aa2.45□□□□□ -2.02
YMR050CYMR050C PLM2Q04383 521 aa2.45□□□□□ -2.02
YMR050CYMR050C DYN3Q04949 312 aa2.45□□□□□ -2.02
YMR050CYMR050C SPC2Q04969 178 aa2.45□□□□□ -2.02
YMR050CYMR050C CSI2Q08054 341 aa2.45□□□□□ -2.02
YMR050CYMR050C FRE5Q08908 694 aa2.45□□□□□ -2.02
YMR050CYMR050C TY2A-BQ12260 438 aa2.45□□□□□ -2.02
YMR050CYMR050C TY2A-OR2Q12293 438 aa2.45□□□□□ -2.02
YMR050CYMR050C TY2A-DR1Q12392 438 aa2.45□□□□□ -2.02
YMR050CYMR050C TY2A-OR1Q12439 438 aa2.45□□□□□ -2.02
YMR050CYMR050C TY2A-DR3Q99303 438 aa2.45□□□□□ -2.02
YMR050CYMR050C DDP1Q99321 188 aaKnown RBP2.45□□□□□ -2.02
YMR050CYMR050C GPM1P00950 247 aaKnown RBP2.45□□□□□ -2.02
YMR050CYMR050C INH1P01097 85 aa2.45□□□□□ -2.02
YMR050CYMR050C SEN2P16658 377 aa2.45□□□□□ -2.02
YMR050CYMR050C ERG3P32353 365 aa2.45□□□□□ -2.02
YMR050CYMR050C ABZ1P37254 787 aaPredicted RBP2.45□□□□□ -2.02
YMR050CYMR050C TAT1P38085 619 aa2.45□□□□□ -2.02
YMR050CYMR050C RPP1P38786 293 aa2.45□□□□□ -2.02
YMR050CYMR050C SPL2P38839 148 aa2.45□□□□□ -2.02
YMR050CYMR050C NVJ1P38881 321 aa2.45□□□□□ -2.02
YMR050CYMR050C PZF1P39933 429 aa2.45□□□□□ -2.02
YMR050CYMR050C YEA4P40004 342 aa2.45□□□□□ -2.02
YMR050CYMR050C ALG5P40350 334 aa2.45□□□□□ -2.02
YMR050CYMR050C RRT8Q08219 342 aa2.45□□□□□ -2.02
YMR050CYMR050C FEX2Q08991 375 aa2.45□□□□□ -2.02
YMR050CYMR050C YLR046CQ12253 270 aa2.45□□□□□ -2.02
YMR050CYMR050C YDL177CQ12257 170 aa2.45□□□□□ -2.02
YMR050CYMR050C YPR1Q12458 312 aa2.45□□□□□ -2.02
YMR050CYMR050C AGC1Q12482 902 aa2.45□□□□□ -2.02
YMR050CYMR050C KTI11Q3E840 82 aa2.45□□□□□ -2.02
YMR050CYMR050C OPI3P05375 206 aa2.45□□□□□ -2.02
YMR050CYMR050C RAD52P06778 471 aaKnown RBP2.45□□□□□ -2.02
YMR050CYMR050C FPR1P20081 114 aaKnown RBP2.45□□□□□ -2.02
YMR050CYMR050C CLB6P32943 380 aa2.45□□□□□ -2.02
YMR050CYMR050C YBR285WP38354 144 aa2.45□□□□□ -2.02
YMR050CYMR050C YMR262WP38430 313 aa2.45□□□□□ -2.02
YMR050CYMR050C AST2P39945 430 aaKnown RBP2.45□□□□□ -2.02
YMR050CYMR050C HYR1P40581 163 aaKnown RBP2.45□□□□□ -2.02
YMR050CYMR050C AZF1P41696 914 aa2.45□□□□□ -2.02
YMR050CYMR050C KEG1P43614 200 aa2.45□□□□□ -2.02
YMR050CYMR050C NAS6P50086 228 aa2.45□□□□□ -2.02
YMR050CYMR050C CGR1P53188 120 aa2.45□□□□□ -2.02
YMR050CYMR050C PEF1P53238 335 aa2.45□□□□□ -2.02
YMR050CYMR050C ERG13P54839 491 aaKnown RBP2.45□□□□□ -2.02
YMR050CYMR050C PPM1Q04081 328 aa2.45□□□□□ -2.02
YMR050CYMR050C NIP7Q08962 181 aaKnown RBP2.45□□□□□ -2.02
YMR050CYMR050C Q0182Q9ZZW1 134 aa2.45□□□□□ -2.02
YMR050CYMR050C PRO3P32263 286 aaKnown RBP2.45□□□□□ -2.02
YMR050CYMR050C APE2P32454 952 aaKnown RBP2.45□□□□□ -2.02
YMR050CYMR050C YNR071CP53757 342 aa2.45□□□□□ -2.02
YMR050CYMR050C LSM7P53905 115 aaKnown RBP2.45□□□□□ -2.02
YMR050CYMR050C DPB4Q04603 196 aaKnown RBP2.45□□□□□ -2.02
YMR050CYMR050C YLR283WQ05867 314 aa2.45□□□□□ -2.02
YMR050CYMR050C PDR8Q06149 701 aa2.45□□□□□ -2.02
YMR050CYMR050C YPQ1Q12010 308 aa2.45□□□□□ -2.02
YMR050CYMR050C FRE7Q12333 620 aa2.45□□□□□ -2.02
YMR050CYMR050C PET494P07390 489 aaPredicted RBP2.44□□□□□ -2.02
YMR050CYMR050C BGL2P15703 313 aaKnown RBP2.44□□□□□ -2.02
YMR050CYMR050C CDC23P16522 626 aa2.44□□□□□ -2.02
YMR050CYMR050C MDH1P17505 334 aaKnown RBP RIP-Chip data2.44□□□□□ -2.02not detected
YMR050CYMR050C PPH21P23594 369 aa2.44□□□□□ -2.02
YMR050CYMR050C PHO3P24031 467 aa2.44□□□□□ -2.02
YMR050CYMR050C SAT4P25333 603 aaKnown RBP2.44□□□□□ -2.02
YMR050CYMR050C IDH2P28241 369 aaKnown RBP2.44□□□□□ -2.02
YMR050CYMR050C CAT2P32796 670 aaKnown RBP2.44□□□□□ -2.02
YMR050CYMR050C YBR144CP34215 104 aa2.44□□□□□ -2.02
YMR050CYMR050C YKL102CP34249 101 aa2.44□□□□□ -2.02
YMR050CYMR050C CLG1P35190 452 aa2.44□□□□□ -2.02
YMR050CYMR050C YBR139WP38109 508 aa2.44□□□□□ -2.02
YMR050CYMR050C VMA22P38784 181 aa2.44□□□□□ -2.02
YMR050CYMR050C MEP2P41948 499 aa2.44□□□□□ -2.02
YMR050CYMR050C NAT4Q04751 285 aa2.44□□□□□ -2.02
YMR050CYMR050C YLR224WQ05947 369 aa2.44□□□□□ -2.02
YMR050CYMR050C ARR1Q06596 294 aa2.44□□□□□ -2.02
YMR050CYMR050C RAF1Q06891 181 aa2.44□□□□□ -2.02
YMR050CYMR050C YOR283WQ12040 230 aaKnown RBP2.44□□□□□ -2.02
YMR050CYMR050C ATP16Q12165 160 aa2.44□□□□□ -2.02
YMR050CYMR050C RBD2Q12270 262 aa2.44□□□□□ -2.02
YMR050CYMR050C THR1P17423 357 aaKnown RBP2.44□□□□□ -2.02
YMR050CYMR050C MRP8P35719 219 aa2.44□□□□□ -2.02
YMR050CYMR050C ELF1P36053 145 aa2.44□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 55.4 ms