RNA–Protein interactions for RNA: YML046W

PRP39, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP39, Length 1,890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP39YML046W DPB3P27344 201 aa0.33□□□□□ -2.36
PRP39YML046W MSP1P28737 362 aa0.33□□□□□ -2.36
PRP39YML046W YMR262WP38430 313 aa0.33□□□□□ -2.36
PRP39YML046W GEP4P38812 185 aa0.33□□□□□ -2.36
PRP39YML046W GGC1P38988 300 aa0.33□□□□□ -2.36
PRP39YML046W ARF3P40994 183 aaRIP-Chip data0.33□□□□□ -2.36not detected
PRP39YML046W SED5Q01590 340 aa0.33□□□□□ -2.36
PRP39YML046W API2Q04413 109 aa0.33□□□□□ -2.36
PRP39YML046W APC4Q04601 652 aa0.33□□□□□ -2.36
PRP39YML046W ARR1Q06596 294 aa0.33□□□□□ -2.36
PRP39YML046W YOR376WQ08900 122 aa0.33□□□□□ -2.36
PRP39YML046W BRR2P32639 2163 aaKnown RBP0.33□□□□□ -2.36
PRP39YML046W MET2P08465 486 aa0.33□□□□□ -2.36
PRP39YML046W REC107P21651 314 aa0.33□□□□□ -2.36
PRP39YML046W CLB1P24868 471 aa0.33□□□□□ -2.36
PRP39YML046W SRX1P36077 127 aa0.33□□□□□ -2.36
PRP39YML046W HSH155P49955 971 aaKnown RBP0.33□□□□□ -2.36
PRP39YML046W YGR015CP53208 328 aa0.33□□□□□ -2.36
PRP39YML046W JJJ1P53863 590 aa0.33□□□□□ -2.36
PRP39YML046W VPS72Q03388 795 aa0.33□□□□□ -2.36
PRP39YML046W GMC1Q04399 608 aa0.33□□□□□ -2.36
PRP39YML046W YPR063CQ12160 140 aa0.33□□□□□ -2.36
PRP39YML046W ANP1P32629 500 aa0.32□□□□□ -2.36
PRP39YML046W PRM1P53835 661 aa0.32□□□□□ -2.36
PRP39YML046W SLT2Q00772 484 aa0.32□□□□□ -2.36
PRP39YML046W SMD1Q02260 146 aaPredicted RBP0.32□□□□□ -2.36
PRP39YML046W UTP15Q04305 513 aaKnown RBP0.32□□□□□ -2.36
PRP39YML046W ATP16Q12165 160 aa0.32□□□□□ -2.36
PRP39YML046W RPL16AP26784 199 aaKnown RBP0.31□□□□□ -2.36
PRP39YML046W TIR2P33890 251 aa0.31□□□□□ -2.36
PRP39YML046W MCR1P36060 302 aaKnown RBP0.31□□□□□ -2.36
PRP39YML046W GPX2P38143 162 aa0.31□□□□□ -2.36
PRP39YML046W FUI1P38196 639 aa0.31□□□□□ -2.36
PRP39YML046W SMF1P38925 575 aa0.31□□□□□ -2.36
PRP39YML046W HEM14P40012 539 aa0.31□□□□□ -2.36
PRP39YML046W RTR1P40084 226 aaPredicted RBP0.31□□□□□ -2.36
PRP39YML046W ASN2P49090 572 aaKnown RBP0.31□□□□□ -2.36
PRP39YML046W CDH1P53197 566 aa0.31□□□□□ -2.36
PRP39YML046W SKO1Q02100 647 aa0.31□□□□□ -2.36
PRP39YML046W YDR541CQ03049 344 aa0.31□□□□□ -2.36
PRP39YML046W CSI1Q04368 295 aa0.31□□□□□ -2.36
PRP39YML046W SNT309Q06091 175 aaPredicted RBP0.31□□□□□ -2.36
PRP39YML046W GAS2Q06135 555 aa0.31□□□□□ -2.36
PRP39YML046W PEX30Q06169 523 aa0.31□□□□□ -2.36
PRP39YML046W YOP1Q12402 180 aa0.31□□□□□ -2.36
PRP39YML046W RIF1P29539 1916 aa0.31□□□□□ -2.36
PRP39YML046W CCW14O13547 238 aa0.31□□□□□ -2.36
PRP39YML046W ADE4P04046 510 aaKnown RBP0.31□□□□□ -2.36
PRP39YML046W ARG3P05150 338 aa0.31□□□□□ -2.36
PRP39YML046W HEM4P06174 275 aa0.31□□□□□ -2.36
PRP39YML046W SNA3P14359 133 aa0.31□□□□□ -2.36
PRP39YML046W COX10P21592 462 aa0.31□□□□□ -2.36
PRP39YML046W MAL32P38158 584 aa0.31□□□□□ -2.36
PRP39YML046W SHE1P38200 338 aa0.31□□□□□ -2.36
PRP39YML046W YHL026CP38740 315 aa0.31□□□□□ -2.36
PRP39YML046W MED6P38782 295 aa0.31□□□□□ -2.36
PRP39YML046W UTP9P38882 575 aaKnown RBP0.31□□□□□ -2.36
PRP39YML046W VID27P40157 782 aa0.31□□□□□ -2.36
PRP39YML046W ATM1P40416 690 aa0.31□□□□□ -2.36
PRP39YML046W KEG1P43614 200 aa0.31□□□□□ -2.36
PRP39YML046W MAL12P53341 584 aa0.31□□□□□ -2.36
PRP39YML046W GAS3Q03655 524 aa0.31□□□□□ -2.36
PRP39YML046W YMR130WQ04223 302 aa0.31□□□□□ -2.36
PRP39YML046W RNH1Q04740 348 aa0.31□□□□□ -2.36
PRP39YML046W VPS54Q12071 889 aa0.31□□□□□ -2.36
PRP39YML046W RPO41P13433 1351 aaKnown RBP0.3□□□□□ -2.36
PRP39YML046W ADE6P38972 1358 aaKnown RBP0.3□□□□□ -2.36
PRP39YML046W TPK3P05986 398 aa0.3□□□□□ -2.36
PRP39YML046W CDC21P06785 304 aa0.3□□□□□ -2.36
PRP39YML046W BGL2P15703 313 aaKnown RBP0.3□□□□□ -2.36
PRP39YML046W RSA4P25382 515 aaKnown RBP0.3□□□□□ -2.36
PRP39YML046W GEX1P25596 615 aa0.3□□□□□ -2.36
PRP39YML046W CIN8P27895 1000 aa0.3□□□□□ -2.36
PRP39YML046W SSE1P32589 693 aaKnown RBP0.3□□□□□ -2.36
PRP39YML046W RPS29AP41057 56 aaKnown RBP0.3□□□□□ -2.36
PRP39YML046W YJR054WP47114 497 aa0.3□□□□□ -2.36
PRP39YML046W NAS6P50086 228 aa0.3□□□□□ -2.36
PRP39YML046W KAP120Q02932 1032 aa0.3□□□□□ -2.36
PRP39YML046W UBX2Q04228 584 aa0.3□□□□□ -2.36
PRP39YML046W DCS1Q06151 350 aa0.3□□□□□ -2.36
PRP39YML046W YDR056CQ12025 205 aa0.3□□□□□ -2.36
PRP39YML046W YOR283WQ12040 230 aaKnown RBP0.3□□□□□ -2.36
PRP39YML046W YDL109CQ12103 647 aa0.3□□□□□ -2.36
PRP39YML046W RUP1Q12242 671 aa0.3□□□□□ -2.36
PRP39YML046W PRP46Q12417 451 aaPredicted RBP0.3□□□□□ -2.36
PRP39YML046W CTA1P15202 515 aa0.29□□□□□ -2.36
PRP39YML046W VMA2P16140 517 aaKnown RBP0.29□□□□□ -2.36
PRP39YML046W KRE1P17260 313 aa0.29□□□□□ -2.36
PRP39YML046W TRX2P22803 104 aaKnown RBP0.29□□□□□ -2.36
PRP39YML046W ROX1P25042 368 aa0.29□□□□□ -2.36
PRP39YML046W SLM5P25345 492 aaKnown RBP0.29□□□□□ -2.36
PRP39YML046W DOA1P36037 715 aa0.29□□□□□ -2.36
PRP39YML046W TRS20P38334 175 aa0.29□□□□□ -2.36
PRP39YML046W CIN2P46670 268 aa0.29□□□□□ -2.36
PRP39YML046W OCA2P53949 197 aa0.29□□□□□ -2.36
PRP39YML046W RPA49Q01080 415 aaPredicted RBP0.29□□□□□ -2.36
PRP39YML046W MED2Q12124 431 aa0.29□□□□□ -2.36
PRP39YML046W CLB3P24870 427 aa0.29□□□□□ -2.36
PRP39YML046W SWE1P32944 819 aa0.29□□□□□ -2.36
PRP39YML046W EBP2P36049 427 aaKnown RBP0.29□□□□□ -2.36
Retrieved 100 of 5,963 RNA–protein pairs in 22.9 ms