RNA–Protein interactions for RNA: YKL130C

SHE2, Transcript of RNA-binding protein that binds specific mRNAs and interacts with She3p, yeastyeast

Gene SHE2, Length 741 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE2YKL130C MEI5P32489 222 aa1.95□□□□□ -2.1
SHE2YKL130C HIS2P38635 335 aa1.95□□□□□ -2.1
SHE2YKL130C YHR035WP38769 630 aa1.95□□□□□ -2.1
SHE2YKL130C LSM12P38828 187 aaKnown RBP1.95□□□□□ -2.1
SHE2YKL130C RCY1P39531 840 aa1.95□□□□□ -2.1
SHE2YKL130C DSE1P40077 573 aa1.95□□□□□ -2.1
SHE2YKL130C YNL208WP40159 199 aaKnown RBP1.95□□□□□ -2.1
SHE2YKL130C YCH1P42937 148 aa1.95□□□□□ -2.1
SHE2YKL130C YFR057WP43625 151 aa1.95□□□□□ -2.1
SHE2YKL130C CIN2P46670 268 aa1.95□□□□□ -2.1
SHE2YKL130C CTK3P46963 296 aaPredicted RBP1.95□□□□□ -2.1
SHE2YKL130C MRX5P47007 382 aa1.95□□□□□ -2.1
SHE2YKL130C NUP84P52891 726 aa1.95□□□□□ -2.1
SHE2YKL130C LSG1P53145 640 aaKnown RBP1.95□□□□□ -2.1
SHE2YKL130C ELP3Q02908 557 aaKnown RBP1.95□□□□□ -2.1
SHE2YKL130C IRC4Q03036 179 aa1.95□□□□□ -2.1
SHE2YKL130C YMR027WQ04371 470 aa1.95□□□□□ -2.1
SHE2YKL130C HRI1Q05905 244 aaKnown RBP1.95□□□□□ -2.1
SHE2YKL130C RIF2Q06208 395 aa1.95□□□□□ -2.1
SHE2YKL130C BER1Q06688 274 aaKnown RBP1.95□□□□□ -2.1
SHE2YKL130C CMS1Q07897 291 aaKnown RBP1.95□□□□□ -2.1
SHE2YKL130C RRT8Q08219 342 aa1.95□□□□□ -2.1
SHE2YKL130C TMS1Q12116 473 aa1.95□□□□□ -2.1
SHE2YKL130C ERV2Q12284 196 aa1.95□□□□□ -2.1
SHE2YKL130C YDL199CQ12407 687 aa1.95□□□□□ -2.1
SHE2YKL130C STU1P38198 1513 aa1.95□□□□□ -2.1
SHE2YKL130C MYO4P32492 1471 aa1.94□□□□□ -2.1
SHE2YKL130C TRM3Q07527 1436 aa1.94□□□□□ -2.1
SHE2YKL130C TDH1P00360 332 aaKnown RBP1.94□□□□□ -2.1
SHE2YKL130C RPL23AP0CX41 137 aaKnown RBP1.94□□□□□ -2.1
SHE2YKL130C RPL23BP0CX42 137 aaKnown RBP1.94□□□□□ -2.1
SHE2YKL130C CTA1P15202 515 aa1.94□□□□□ -2.1
SHE2YKL130C SPR1P32603 445 aa1.94□□□□□ -2.1
SHE2YKL130C COT1P32798 439 aa1.94□□□□□ -2.1
SHE2YKL130C ZRT1P32804 376 aa1.94□□□□□ -2.1
SHE2YKL130C TPO5P36029 618 aa1.94□□□□□ -2.1
SHE2YKL130C SWD2P36104 329 aaPredicted RBP1.94□□□□□ -2.1
SHE2YKL130C YAP3P38749 330 aa1.94□□□□□ -2.1
SHE2YKL130C CTM1P38818 585 aa1.94□□□□□ -2.1
SHE2YKL130C TDA11P38854 504 aa1.94□□□□□ -2.1
SHE2YKL130C REE1P40893 198 aa1.94□□□□□ -2.1
SHE2YKL130C LIA1P47120 325 aaKnown RBP1.94□□□□□ -2.1
SHE2YKL130C YJR085CP47131 105 aaKnown RBP1.94□□□□□ -2.1
SHE2YKL130C SEH1P53011 349 aaKnown RBP1.94□□□□□ -2.1
SHE2YKL130C YGR266WP53326 701 aa1.94□□□□□ -2.1
SHE2YKL130C BIO4P53630 237 aa1.94□□□□□ -2.1
SHE2YKL130C YPL080CQ02826 108 aa1.94□□□□□ -2.1
SHE2YKL130C TRM82Q03774 444 aa1.94□□□□□ -2.1
SHE2YKL130C GAS2Q06135 555 aa1.94□□□□□ -2.1
SHE2YKL130C PBP4Q07362 185 aaKnown RBP1.94□□□□□ -2.1
SHE2YKL130C YLL007CQ07799 665 aa1.94□□□□□ -2.1
SHE2YKL130C IRC25Q07951 179 aa1.94□□□□□ -2.1
SHE2YKL130C DDC1Q08949 612 aa1.94□□□□□ -2.1
SHE2YKL130C YPQ1Q12010 308 aa1.94□□□□□ -2.1
SHE2YKL130C MED4Q12343 284 aa1.94□□□□□ -2.1
SHE2YKL130C IZH4Q99393 312 aa1.94□□□□□ -2.1
SHE2YKL130C NUP170P38181 1502 aa1.93□□□□□ -2.1
SHE2YKL130C RPS8AP0CX39 200 aaKnown RBP1.93□□□□□ -2.1
SHE2YKL130C RPS8BP0CX40 200 aaKnown RBP1.93□□□□□ -2.1
SHE2YKL130C UNG1P12887 359 aa1.93□□□□□ -2.1
SHE2YKL130C RSR1P13856 272 aa1.93□□□□□ -2.1
SHE2YKL130C FRS2P15625 503 aaKnown RBP1.93□□□□□ -2.1
SHE2YKL130C PET123P17558 318 aa1.93□□□□□ -2.1
SHE2YKL130C CHA1P25379 360 aaKnown RBP1.93□□□□□ -2.1
SHE2YKL130C LDS1P31379 325 aa1.93□□□□□ -2.1
SHE2YKL130C IME2P32581 645 aa1.93□□□□□ -2.1
SHE2YKL130C SKG6P32900 734 aaPredicted RBP1.93□□□□□ -2.1
SHE2YKL130C CSE2P33308 149 aa1.93□□□□□ -2.1
SHE2YKL130C COY1P34237 679 aa1.93□□□□□ -2.1
SHE2YKL130C SMF2P38778 549 aa1.93□□□□□ -2.1
SHE2YKL130C PAN6P40459 309 aa1.93□□□□□ -2.1
SHE2YKL130C AGP3P43548 558 aa1.93□□□□□ -2.1
SHE2YKL130C BIR1P47134 954 aa1.93□□□□□ -2.1
SHE2YKL130C SHY1P53266 389 aa1.93□□□□□ -2.1
SHE2YKL130C CRH1P53301 507 aa1.93□□□□□ -2.1
SHE2YKL130C SPP2Q02521 185 aa1.93□□□□□ -2.1
SHE2YKL130C YPL077CQ02831 240 aa1.93□□□□□ -2.1
SHE2YKL130C RNH1Q04740 348 aa1.93□□□□□ -2.1
SHE2YKL130C FSH2Q05015 223 aa1.93□□□□□ -2.1
SHE2YKL130C GMC2Q06201 188 aa1.93□□□□□ -2.1
SHE2YKL130C GPN3Q06543 272 aa1.93□□□□□ -2.1
SHE2YKL130C DTD1Q07648 150 aaKnown RBP1.93□□□□□ -2.1
SHE2YKL130C APC9Q12107 265 aa1.93□□□□□ -2.1
SHE2YKL130C FRE8Q12209 686 aa1.93□□□□□ -2.1
SHE2YKL130C ERP3Q12403 225 aa1.93□□□□□ -2.1
SHE2YKL130C PRP46Q12417 451 aaPredicted RBP1.93□□□□□ -2.1
SHE2YKL130C IZH2Q12442 317 aa1.93□□□□□ -2.1
SHE2YKL130C NAG1Q8TGN9 163 aa1.93□□□□□ -2.1
SHE2YKL130C POL1P13382 1468 aa1.93□□□□□ -2.1
SHE2YKL130C YOR1P53049 1477 aa1.93□□□□□ -2.1
SHE2YKL130C SNT2P53127 1403 aa1.92□□□□□ -2.1
SHE2YKL130C ATP6P00854 259 aa1.92□□□□□ -2.1
SHE2YKL130C REP1P03871 373 aa1.92□□□□□ -2.1
SHE2YKL130C YSR3P23501 404 aa1.92□□□□□ -2.1
SHE2YKL130C MIR1P23641 311 aaKnown RBP1.92□□□□□ -2.1
SHE2YKL130C RVS161P25343 265 aaKnown RBP1.92□□□□□ -2.1
SHE2YKL130C GIT1P25346 518 aa1.92□□□□□ -2.1
SHE2YKL130C URA10P30402 227 aa1.92□□□□□ -2.1
SHE2YKL130C RPT5P33297 434 aaKnown RBP1.92□□□□□ -2.1
SHE2YKL130C KTI12P34253 313 aaKnown RBP1.92□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms