RNA–Protein interactions for RNA: YJL041W

NSP1, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NSP1, Length 2,472 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NSP1YJL041W PER33Q12144 273 aa3.29□□□□□ -1.88
NSP1YJL041W YRA1Q12159 226 aaKnown RBP3.29□□□□□ -1.88
NSP1YJL041W TRM13Q12383 476 aa3.29□□□□□ -1.88
NSP1YJL041W YDL199CQ12407 687 aa3.29□□□□□ -1.88
NSP1YJL041W YOL159C-AQ3E769 90 aa3.29□□□□□ -1.88
NSP1YJL041W ERG11P10614 530 aa3.29□□□□□ -1.88
NSP1YJL041W BAR1P12630 587 aa3.29□□□□□ -1.88
NSP1YJL041W UNG1P12887 359 aa3.29□□□□□ -1.88
NSP1YJL041W CPR1P14832 162 aaKnown RBP3.29□□□□□ -1.88
NSP1YJL041W URK1P27515 501 aa3.29□□□□□ -1.88
NSP1YJL041W EHD3P28817 500 aa3.29□□□□□ -1.88
NSP1YJL041W MSK1P32048 576 aa3.29□□□□□ -1.88
NSP1YJL041W LCP5P40079 357 aaPredicted RBP3.29□□□□□ -1.88
NSP1YJL041W ELO3P40319 345 aa3.29□□□□□ -1.88
NSP1YJL041W RFC2P40348 353 aa3.29□□□□□ -1.88
NSP1YJL041W MET28P40573 187 aa3.29□□□□□ -1.88
NSP1YJL041W COS10P52924 374 aa3.29□□□□□ -1.88
NSP1YJL041W STR3P53101 465 aaKnown RBP3.29□□□□□ -1.88
NSP1YJL041W YGR117CP53270 476 aa3.29□□□□□ -1.88
NSP1YJL041W VBA4Q04602 768 aaKnown RBP3.29□□□□□ -1.88
NSP1YJL041W YLR297WQ05899 129 aa3.29□□□□□ -1.88
NSP1YJL041W PEX30Q06169 523 aa3.29□□□□□ -1.88
NSP1YJL041W MRI1Q06489 411 aaKnown RBP3.29□□□□□ -1.88
NSP1YJL041W ASA1Q06822 443 aa3.29□□□□□ -1.88
NSP1YJL041W GAS5Q08193 484 aa3.29□□□□□ -1.88
NSP1YJL041W YPL264CQ08980 353 aa3.29□□□□□ -1.88
NSP1YJL041W NBL1Q3E7Y6 73 aa3.29□□□□□ -1.88
NSP1YJL041W TY1B-NL2Q99337 1749 aaKnown RBP3.28□□□□□ -1.88
NSP1YJL041W YLR462WO13556 202 aa3.28□□□□□ -1.88
NSP1YJL041W YOR304C-AO14468 76 aa3.28□□□□□ -1.88
NSP1YJL041W PRC1P00729 532 aa3.28□□□□□ -1.88
NSP1YJL041W TPK1P06244 397 aa3.28□□□□□ -1.88
NSP1YJL041W SGA1P08019 549 aa3.28□□□□□ -1.88
NSP1YJL041W RPS28BP0C0X0 67 aaKnown RBP3.28□□□□□ -1.88
NSP1YJL041W NHP6BP11633 99 aaKnown RBP3.28□□□□□ -1.88
NSP1YJL041W SAM35P14693 329 aa3.28□□□□□ -1.88
NSP1YJL041W RPB5P20434 215 aa3.28□□□□□ -1.88
NSP1YJL041W MIR1P23641 311 aaKnown RBP3.28□□□□□ -1.88
NSP1YJL041W VBA3P25594 458 aa3.28□□□□□ -1.88
NSP1YJL041W TIP20P33891 701 aa3.28□□□□□ -1.88
NSP1YJL041W SSS1P35179 80 aa3.28□□□□□ -1.88
NSP1YJL041W YPT53P36019 220 aa3.28□□□□□ -1.88
NSP1YJL041W CMC1P36064 111 aa3.28□□□□□ -1.88
NSP1YJL041W QDR3P38227 689 aa3.28□□□□□ -1.88
NSP1YJL041W ERG7P38604 731 aa3.28□□□□□ -1.88
NSP1YJL041W YHL049CP38722 271 aa3.28□□□□□ -1.88
NSP1YJL041W GIC1P38785 314 aa3.28□□□□□ -1.88
NSP1YJL041W YEL075CP39972 122 aa3.28□□□□□ -1.88
NSP1YJL041W YER189WP40104 122 aa3.28□□□□□ -1.88
NSP1YJL041W PRE6P40303 254 aaKnown RBP3.28□□□□□ -1.88
NSP1YJL041W YFL064CP43540 174 aa3.28□□□□□ -1.88
NSP1YJL041W MOB2P43563 287 aa3.28□□□□□ -1.88
NSP1YJL041W SIP4P46954 829 aa3.28□□□□□ -1.88
NSP1YJL041W ASN2P49090 572 aaKnown RBP3.28□□□□□ -1.88
NSP1YJL041W NRK1P53915 240 aa3.28□□□□□ -1.88
NSP1YJL041W SKI8Q02793 397 aaPredicted RBP3.28□□□□□ -1.88
NSP1YJL041W YPL071CQ02864 156 aa3.28□□□□□ -1.88
NSP1YJL041W CGI121Q03705 181 aaKnown RBP3.28□□□□□ -1.88
NSP1YJL041W EKI1Q03764 534 aa3.28□□□□□ -1.88
NSP1YJL041W PAL1Q05518 499 aaKnown RBP3.28□□□□□ -1.88
NSP1YJL041W IRC10Q08118 586 aa3.28□□□□□ -1.88
NSP1YJL041W RRT8Q08219 342 aa3.28□□□□□ -1.88
NSP1YJL041W PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.28□□□□□ -1.88not detected
NSP1YJL041W SUL2Q12325 893 aa3.28□□□□□ -1.88
NSP1YJL041W RPS28AQ3E7X9 67 aaPredicted RBP3.28□□□□□ -1.88
NSP1YJL041W COX5BP00425 151 aa3.28□□□□□ -1.88
NSP1YJL041W DDI2P0CH63 225 aa3.28□□□□□ -1.88
NSP1YJL041W DDI3P0CH64 225 aa3.28□□□□□ -1.88
NSP1YJL041W HSF1P10961 833 aa3.28□□□□□ -1.88
NSP1YJL041W HAP3P13434 144 aa3.28□□□□□ -1.88
NSP1YJL041W SPO7P18410 259 aa3.28□□□□□ -1.88
NSP1YJL041W DAL2P25335 343 aa3.28□□□□□ -1.88
NSP1YJL041W RER1P25560 188 aa3.28□□□□□ -1.88
NSP1YJL041W CTS1P29029 562 aa3.28□□□□□ -1.88
NSP1YJL041W MRPL6P32904 214 aa3.28□□□□□ -1.88
NSP1YJL041W SOF1P33750 489 aaKnown RBP3.28□□□□□ -1.88
NSP1YJL041W YKL151CP36059 337 aa3.28□□□□□ -1.88
NSP1YJL041W GEX2P36173 615 aa3.28□□□□□ -1.88
NSP1YJL041W TSL1P38427 1098 aaKnown RBP3.28□□□□□ -1.88
NSP1YJL041W PRS3P38689 320 aaKnown RBP3.28□□□□□ -1.88
NSP1YJL041W SRP14P38985 146 aa3.28□□□□□ -1.88
NSP1YJL041W END3P39013 349 aa3.28□□□□□ -1.88
NSP1YJL041W PAC2P39937 518 aa3.28□□□□□ -1.88
NSP1YJL041W TIF34P40217 347 aaKnown RBP3.28□□□□□ -1.88
NSP1YJL041W PTR3P43606 678 aa3.28□□□□□ -1.88
NSP1YJL041W PHB2P50085 310 aa3.28□□□□□ -1.88
NSP1YJL041W PIB2P53191 635 aa3.28□□□□□ -1.88
NSP1YJL041W BOR1P53838 576 aa3.28□□□□□ -1.88
NSP1YJL041W REG1Q00816 1014 aa3.28□□□□□ -1.88
NSP1YJL041W YMR099CQ03161 297 aaKnown RBP3.28□□□□□ -1.88
NSP1YJL041W YML018CQ03730 393 aa3.28□□□□□ -1.88
NSP1YJL041W ROY1Q04847 553 aa3.28□□□□□ -1.88
NSP1YJL041W MFB1Q04922 465 aa3.28□□□□□ -1.88
NSP1YJL041W RNH202Q05635 350 aa3.28□□□□□ -1.88
NSP1YJL041W SUE1Q06524 206 aa3.28□□□□□ -1.88
NSP1YJL041W POM33Q12164 279 aa3.28□□□□□ -1.88
NSP1YJL041W SVS1Q12254 260 aa3.28□□□□□ -1.88
NSP1YJL041W TPO4Q12256 659 aa3.28□□□□□ -1.88
NSP1YJL041W RRI1Q12468 440 aa3.28□□□□□ -1.88
NSP1YJL041W PAR32Q12515 295 aaKnown RBP3.28□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms