RNA–Protein interactions for RNA: YGR028W

MSP1, Transcript of Highly-conserved N-terminally anchored AAA-ATPase, yeastyeast

Gene MSP1, Length 1,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSP1YGR028W ERB1Q04660 807 aaKnown RBP5.74□□□□□ -1.49
MSP1YGR028W GAS2Q06135 555 aa5.74□□□□□ -1.49
MSP1YGR028W ARR1Q06596 294 aa5.74□□□□□ -1.49
MSP1YGR028W VPS36Q06696 566 aa5.74□□□□□ -1.49
MSP1YGR028W YPR202WQ08993 238 aa5.74□□□□□ -1.49
MSP1YGR028W THP2O13539 261 aaKnown RBP5.73□□□□□ -1.49
MSP1YGR028W MF(ALPHA)1P01149 165 aa5.73□□□□□ -1.49
MSP1YGR028W KSS1P14681 368 aa5.73□□□□□ -1.49
MSP1YGR028W TOA1P32773 286 aa5.73□□□□□ -1.49
MSP1YGR028W IST2P38250 946 aa5.73□□□□□ -1.49
MSP1YGR028W TSC10P38342 320 aa5.73□□□□□ -1.49
MSP1YGR028W FAD1P38913 306 aa5.73□□□□□ -1.49
MSP1YGR028W MNN9P39107 395 aaKnown RBP5.73□□□□□ -1.49
MSP1YGR028W MTW1P39731 289 aa5.73□□□□□ -1.49
MSP1YGR028W YER010CP40011 234 aa5.73□□□□□ -1.49
MSP1YGR028W LSG1P53145 640 aaKnown RBP5.73□□□□□ -1.49
MSP1YGR028W COG2P53271 262 aa5.73□□□□□ -1.49
MSP1YGR028W MTQ1P53944 314 aa5.73□□□□□ -1.49
MSP1YGR028W SUB1P54000 292 aaKnown RBP5.73□□□□□ -1.49
MSP1YGR028W MMT1Q03218 510 aa5.73□□□□□ -1.49
MSP1YGR028W RSN1Q03516 953 aa5.73□□□□□ -1.49
MSP1YGR028W SNX41Q04053 625 aa5.73□□□□□ -1.49
MSP1YGR028W DYN3Q04949 312 aa5.73□□□□□ -1.49
MSP1YGR028W NSL1Q12143 216 aa5.73□□□□□ -1.49
MSP1YGR028W ATP6P00854 259 aa5.72□□□□□ -1.49
MSP1YGR028W CLB3P24870 427 aa5.72□□□□□ -1.49
MSP1YGR028W PBN1P25580 416 aa5.72□□□□□ -1.49
MSP1YGR028W YIM1P28625 365 aa5.72□□□□□ -1.49
MSP1YGR028W TEF4P36008 412 aaKnown RBP5.72□□□□□ -1.49
MSP1YGR028W HEK2P38199 381 aaKnown RBP RIP-Chip data5.72□□□□□ -1.49not detected
MSP1YGR028W TRM5P38793 499 aa5.72□□□□□ -1.49
MSP1YGR028W BIG1P38813 335 aa5.72□□□□□ -1.49
MSP1YGR028W ECM10P39987 644 aa5.72□□□□□ -1.49
MSP1YGR028W YIL166CP40445 542 aa5.72□□□□□ -1.49
MSP1YGR028W YIL077CP40508 320 aa5.72□□□□□ -1.49
MSP1YGR028W MNN5P46982 586 aa5.72□□□□□ -1.49
MSP1YGR028W YGR066CP53242 292 aa5.72□□□□□ -1.49
MSP1YGR028W YDR249CQ03787 373 aa5.72□□□□□ -1.49
MSP1YGR028W HSP31Q04432 237 aa5.72□□□□□ -1.49
MSP1YGR028W SSQ1Q05931 657 aaPredicted RBP5.72□□□□□ -1.49
MSP1YGR028W ARV1Q06541 321 aa5.72□□□□□ -1.49
MSP1YGR028W FMP40Q08968 688 aaPredicted RBP5.72□□□□□ -1.49
MSP1YGR028W RCN2Q12044 265 aa5.72□□□□□ -1.49
MSP1YGR028W USV1Q12132 391 aa5.72□□□□□ -1.49
MSP1YGR028W SFG1Q12507 346 aa5.72□□□□□ -1.49
MSP1YGR028W SPS100P13130 326 aa5.71□□□□□ -1.5
MSP1YGR028W SAN1P22470 610 aa5.71□□□□□ -1.5
MSP1YGR028W RPS1BP23248 255 aaKnown RBP5.71□□□□□ -1.5
MSP1YGR028W CDC10P25342 322 aaKnown RBP5.71□□□□□ -1.5
MSP1YGR028W CSM1P25651 190 aa5.71□□□□□ -1.5
MSP1YGR028W LOT5P34234 306 aa5.71□□□□□ -1.5
MSP1YGR028W SHO1P40073 367 aa5.71□□□□□ -1.5
MSP1YGR028W ALG5P40350 334 aa5.71□□□□□ -1.5
MSP1YGR028W XBP1P40489 647 aa5.71□□□□□ -1.5
MSP1YGR028W DIA3P52290 468 aa5.71□□□□□ -1.5
MSP1YGR028W SYF2P53277 215 aaPredicted RBP5.71□□□□□ -1.5
MSP1YGR028W YGR151CP53287 111 aa5.71□□□□□ -1.5
MSP1YGR028W MKC7P53379 596 aa5.71□□□□□ -1.5
MSP1YGR028W YNR068CP53754 272 aa5.71□□□□□ -1.5
MSP1YGR028W RSC9Q03124 581 aa5.71□□□□□ -1.5
MSP1YGR028W EKI1Q03764 534 aa5.71□□□□□ -1.5
MSP1YGR028W KRE28Q04431 385 aa5.71□□□□□ -1.5
MSP1YGR028W BUR2Q05949 395 aa5.71□□□□□ -1.5
MSP1YGR028W RGC1Q06108 1083 aaKnown RBP5.71□□□□□ -1.5
MSP1YGR028W YDL086WQ07505 273 aa5.71□□□□□ -1.5
MSP1YGR028W YRA1Q12159 226 aaKnown RBP5.71□□□□□ -1.5
MSP1YGR028W HER1Q12276 1246 aa5.71□□□□□ -1.5
MSP1YGR028W PSY3Q12318 242 aa5.71□□□□□ -1.5
MSP1YGR028W RPN13O13563 156 aa5.7□□□□□ -1.5
MSP1YGR028W DBP3P20447 523 aaKnown RBP5.7□□□□□ -1.5
MSP1YGR028W MDH2P22133 377 aa5.7□□□□□ -1.5
MSP1YGR028W YEF1P32622 495 aa5.7□□□□□ -1.5
MSP1YGR028W TDP1P38319 544 aa5.7□□□□□ -1.5
MSP1YGR028W MRX1P40050 688 aa5.7□□□□□ -1.5
MSP1YGR028W TWF1P53250 332 aa5.7□□□□□ -1.5
MSP1YGR028W RHO5P53879 331 aaKnown RBP5.7□□□□□ -1.5
MSP1YGR028W RIM13Q03792 727 aa5.7□□□□□ -1.5
MSP1YGR028W COX20Q04935 205 aa5.7□□□□□ -1.5
MSP1YGR028W CBP6P07253 162 aaPredicted RBP5.69□□□□□ -1.5
MSP1YGR028W DEP1P31385 405 aa5.69□□□□□ -1.5
MSP1YGR028W APL3P38065 1025 aa5.69□□□□□ -1.5
MSP1YGR028W MTC4P38335 694 aaKnown RBP5.69□□□□□ -1.5
MSP1YGR028W PTH1P38876 190 aaKnown RBP5.69□□□□□ -1.5
MSP1YGR028W BUD8P41698 603 aa5.69□□□□□ -1.5
MSP1YGR028W NIT2P47016 307 aa5.69□□□□□ -1.5
MSP1YGR028W SHE4P51534 789 aa5.69□□□□□ -1.5
MSP1YGR028W HRI1Q05905 244 aaKnown RBP5.69□□□□□ -1.5
MSP1YGR028W SPO77Q06134 477 aa5.69□□□□□ -1.5
MSP1YGR028W STP4Q07351 490 aa5.69□□□□□ -1.5
MSP1YGR028W MFG1Q07684 458 aa5.69□□□□□ -1.5
MSP1YGR028W FOL3Q12676 427 aaPredicted RBP5.69□□□□□ -1.5
MSP1YGR028W PDX1P16451 410 aa5.68□□□□□ -1.5
MSP1YGR028W ERD2P18414 219 aa5.68□□□□□ -1.5
MSP1YGR028W SAC1P32368 623 aaKnown RBP5.68□□□□□ -1.5
MSP1YGR028W MIA40P36046 403 aa5.68□□□□□ -1.5
MSP1YGR028W YHR180WP38868 163 aa5.68□□□□□ -1.5
MSP1YGR028W LSM4P40070 187 aaKnown RBP5.68□□□□□ -1.5
MSP1YGR028W MET28P40573 187 aa5.68□□□□□ -1.5
MSP1YGR028W IAH1P41734 238 aa5.68□□□□□ -1.5
MSP1YGR028W TAF4P50105 388 aa5.68□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 22 ms