RNA–Protein interactions for RNA: YDL150W

RPC53, Transcript of RNA polymerase III subunit C53, yeast

Gene RPC53, Length 1,269 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPC53	YDL150W	LSM3	P57743	89 aa	Known RBP	4.12	□□□□□ -1.75
RPC53	YDL150W	SKO1	Q02100	647 aa		4.12	□□□□□ -1.75
RPC53	YDL150W	YPL113C	Q02961	396 aa		4.12	□□□□□ -1.75
RPC53	YDL150W	CCE1	Q03702	353 aa		4.12	□□□□□ -1.75
RPC53	YDL150W	TRM12	Q04235	462 aa		4.12	□□□□□ -1.75
RPC53	YDL150W	ROY1	Q04847	553 aa		4.12	□□□□□ -1.75
RPC53	YDL150W	ERP1	Q05359	219 aa	Known RBP	4.12	□□□□□ -1.75
RPC53	YDL150W	COS7	Q07788	383 aa		4.12	□□□□□ -1.75
RPC53	YDL150W	YPL278C	Q08990	100 aa		4.12	□□□□□ -1.75
RPC53	YDL150W	YOR012W	Q12351	137 aa		4.12	□□□□□ -1.75
RPC53	YDL150W	RKM5	Q12367	367 aa		4.12	□□□□□ -1.75
RPC53	YDL150W	NAG1	Q8TGN9	163 aa		4.12	□□□□□ -1.75
RPC53	YDL150W	MRS3	P10566	314 aa		4.11	□□□□□ -1.75
RPC53	YDL150W	DAL82	P21705	255 aa		4.11	□□□□□ -1.75
RPC53	YDL150W	CLB1	P24868	471 aa		4.11	□□□□□ -1.75
RPC53	YDL150W	CRM1	P30822	1084 aa	Known RBP	4.11	□□□□□ -1.75
RPC53	YDL150W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
RPC53	YDL150W	COA1	P40452	197 aa		4.11	□□□□□ -1.75
RPC53	YDL150W	TIS11	P47977	285 aa		4.11	□□□□□ -1.75
RPC53	YDL150W	MRM2	P53123	320 aa		4.11	□□□□□ -1.75
RPC53	YDL150W	DSL1	P53847	754 aa		4.11	□□□□□ -1.75
RPC53	YDL150W	YML096W	Q04489	525 aa		4.11	□□□□□ -1.75
RPC53	YDL150W	RIF2	Q06208	395 aa		4.11	□□□□□ -1.75
RPC53	YDL150W	NOT5	Q12514	560 aa	Predicted RBP	4.11	□□□□□ -1.75
RPC53	YDL150W	ISN1	Q99312	450 aa		4.11	□□□□□ -1.75
RPC53	YDL150W	BRR2	P32639	2163 aa	Known RBP	4.1	□□□□□ -1.75
RPC53	YDL150W	CDC21	P06785	304 aa		4.1	□□□□□ -1.75
RPC53	YDL150W	YAR066W	P0CX18	203 aa		4.1	□□□□□ -1.75
RPC53	YDL150W	YHR214W	P0CX19	203 aa		4.1	□□□□□ -1.75
RPC53	YDL150W	ATR1	P13090	542 aa		4.1	□□□□□ -1.75
RPC53	YDL150W	DEP1	P31385	405 aa		4.1	□□□□□ -1.75
RPC53	YDL150W	PRP21	P32524	280 aa	Predicted RBP	4.1	□□□□□ -1.75
RPC53	YDL150W	VMA8	P32610	256 aa	Known RBP	4.1	□□□□□ -1.75
RPC53	YDL150W	TOA1	P32773	286 aa		4.1	□□□□□ -1.75
RPC53	YDL150W	YPT52	P36018	234 aa	Known RBP	4.1	□□□□□ -1.75
RPC53	YDL150W	MDM31	P38880	579 aa		4.1	□□□□□ -1.75
RPC53	YDL150W	YHB1	P39676	399 aa	Known RBP	4.1	□□□□□ -1.75
RPC53	YDL150W	SHO1	P40073	367 aa		4.1	□□□□□ -1.75
RPC53	YDL150W	MEP1	P40260	492 aa		4.1	□□□□□ -1.75
RPC53	YDL150W	CAK1	P43568	368 aa	Predicted RBP	4.1	□□□□□ -1.75
RPC53	YDL150W	GWT1	P47026	490 aa		4.1	□□□□□ -1.75
RPC53	YDL150W	BIR1	P47134	954 aa		4.1	□□□□□ -1.75
RPC53	YDL150W	SHY1	P53266	389 aa		4.1	□□□□□ -1.75
RPC53	YDL150W	ZRG17	P53735	605 aa		4.1	□□□□□ -1.75
RPC53	YDL150W	HSP31	Q04432	237 aa		4.1	□□□□□ -1.75
RPC53	YDL150W	MED2	Q12124	431 aa		4.1	□□□□□ -1.75
RPC53	YDL150W	RSR1	P13856	272 aa		4.09	□□□□□ -1.75
RPC53	YDL150W	PRP16	P15938	1071 aa	Predicted RBP	4.09	□□□□□ -1.75
RPC53	YDL150W	PHO84	P25297	587 aa	Known RBP	4.09	□□□□□ -1.75
RPC53	YDL150W	NIP1	P32497	812 aa	Known RBP	4.09	□□□□□ -1.75
RPC53	YDL150W	SPR1	P32603	445 aa		4.09	□□□□□ -1.75
RPC53	YDL150W	SDH3	P33421	198 aa		4.09	□□□□□ -1.75
RPC53	YDL150W	RFC3	P38629	340 aa		4.09	□□□□□ -1.75
RPC53	YDL150W	YHR045W	P38775	560 aa		4.09	□□□□□ -1.75
RPC53	YDL150W	PTI1	P39927	425 aa	Predicted RBP	4.09	□□□□□ -1.75
RPC53	YDL150W	YEL073C	P39974	107 aa		4.09	□□□□□ -1.75
RPC53	YDL150W	CIS3	P47001	227 aa		4.09	□□□□□ -1.75
RPC53	YDL150W	GTR2	P53290	341 aa		4.09	□□□□□ -1.75
RPC53	YDL150W	NOP19	P53317	196 aa	Predicted RBP	4.09	□□□□□ -1.75
RPC53	YDL150W	CUS2	P53830	285 aa	Predicted RBP	4.09	□□□□□ -1.75
RPC53	YDL150W	SLM2	P53955	656 aa		4.09	□□□□□ -1.75
RPC53	YDL150W	HOT1	Q03213	719 aa		4.09	□□□□□ -1.75
RPC53	YDL150W	BCH1	Q05029	724 aa		4.09	□□□□□ -1.75
RPC53	YDL150W	YOL019W	Q08157	551 aa		4.09	□□□□□ -1.75
RPC53	YDL150W	VPS68	Q12016	184 aa		4.09	□□□□□ -1.75
RPC53	YDL150W	SRO7	Q12038	1033 aa		4.09	□□□□□ -1.75
RPC53	YDL150W	VAM3	Q12241	283 aa		4.09	□□□□□ -1.75
RPC53	YDL150W	YDR061W	Q12298	539 aa		4.09	□□□□□ -1.75
RPC53	YDL150W	PST1	Q12355	444 aa		4.09	□□□□□ -1.75
RPC53	YDL150W	SET6	Q12529	373 aa		4.09	□□□□□ -1.75
RPC53	YDL150W	SRN2	Q99176	213 aa		4.09	□□□□□ -1.75
RPC53	YDL150W	RPL15A	P05748	204 aa	Known RBP	4.08	□□□□□ -1.76
RPC53	YDL150W	CYR1	P08678	2026 aa	Known RBP	4.08	□□□□□ -1.76
RPC53	YDL150W	COS2	P0CX12	379 aa		4.08	□□□□□ -1.76
RPC53	YDL150W	COS3	P0CX13	379 aa		4.08	□□□□□ -1.76
RPC53	YDL150W	RPL20A	P0CX23	172 aa	Known RBP	4.08	□□□□□ -1.76
RPC53	YDL150W	RPL20B	P0CX24	172 aa	Predicted RBP	4.08	□□□□□ -1.76
RPC53	YDL150W	CPR2	P23285	205 aa		4.08	□□□□□ -1.76
RPC53	YDL150W	YSR3	P23501	404 aa		4.08	□□□□□ -1.76
RPC53	YDL150W	CPR3	P25719	182 aa		4.08	□□□□□ -1.76
RPC53	YDL150W	BUB2	P26448	306 aa	Predicted RBP	4.08	□□□□□ -1.76
RPC53	YDL150W	CIN8	P27895	1000 aa		4.08	□□□□□ -1.76
RPC53	YDL150W	CWP1	P28319	239 aa		4.08	□□□□□ -1.76
RPC53	YDL150W	COX13	P32799	129 aa		4.08	□□□□□ -1.76
RPC53	YDL150W	PTC1	P35182	281 aa		4.08	□□□□□ -1.76
RPC53	YDL150W	UTP20	P35194	2493 aa	Known RBP	4.08	□□□□□ -1.76
RPC53	YDL150W	FRE2	P36033	711 aa		4.08	□□□□□ -1.76
RPC53	YDL150W	YHR127W	P38833	243 aa	Known RBP	4.08	□□□□□ -1.76
RPC53	YDL150W	KRE9	P39005	276 aa		4.08	□□□□□ -1.76
RPC53	YDL150W	NPT1	P39683	429 aa	Known RBP	4.08	□□□□□ -1.76
RPC53	YDL150W	FRT2	P39734	528 aa		4.08	□□□□□ -1.76
RPC53	YDL150W	GIM4	P40005	111 aa	Known RBP	4.08	□□□□□ -1.76
RPC53	YDL150W	YER034W	P40022	185 aa	Known RBP	4.08	□□□□□ -1.76
RPC53	YDL150W	COS4	P43542	379 aa		4.08	□□□□□ -1.76
RPC53	YDL150W	TMA22	P47089	198 aa	Predicted RBP	4.08	□□□□□ -1.76
RPC53	YDL150W	YNL260C	P53846	198 aa		4.08	□□□□□ -1.76
RPC53	YDL150W	YNL010W	P53981	241 aa	Known RBP	4.08	□□□□□ -1.76
RPC53	YDL150W	REX2	P54964	269 aa	Known RBP	4.08	□□□□□ -1.76
RPC53	YDL150W	CIK1	Q01649	594 aa		4.08	□□□□□ -1.76
RPC53	YDL150W	YMR102C	Q03177	834 aa		4.08	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 26.8 ms