RNA–Protein interactions for RNA: YPL020C

ULP1, Transcript of Protease that specifically cleaves Smt3p protein conjugates, yeast

Gene ULP1, Length 1,866 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ULP1	YPL020C	PPX1	P38698	397 aa		5.06	□□□□□ -1.6
ULP1	YPL020C	NAF1	P53919	492 aa	Known RBP	5.06	□□□□□ -1.6
ULP1	YPL020C	YAF9	P53930	226 aa		5.06	□□□□□ -1.6
ULP1	YPL020C	TRL1	P09880	827 aa	Known RBP	5.05	□□□□□ -1.6
ULP1	YPL020C	GAL2	P13181	574 aa		5.05	□□□□□ -1.6
ULP1	YPL020C	TPS3	P38426	1054 aa	Known RBP	5.05	□□□□□ -1.6
ULP1	YPL020C	GRS1	P38088	690 aa	Known RBP	5.05	□□□□□ -1.6
ULP1	YPL020C	NMD2	P38798	1089 aa	Known RBP	5.05	□□□□□ -1.6
ULP1	YPL020C	MDJ2	P42834	146 aa		5.05	□□□□□ -1.6
ULP1	YPL020C	DPL1	Q05567	589 aa		5.05	□□□□□ -1.6
ULP1	YPL020C	TFB4	Q12004	338 aa		5.05	□□□□□ -1.6
ULP1	YPL020C	MCM16	Q12262	181 aa		5.05	□□□□□ -1.6
ULP1	YPL020C	WHI5	Q12416	295 aa		5.05	□□□□□ -1.6
ULP1	YPL020C	SLY41	P22215	453 aa		5.04	□□□□□ -1.6
ULP1	YPL020C	CST6	P40535	587 aa		5.04	□□□□□ -1.6
ULP1	YPL020C	GYP1	Q08484	637 aa		5.04	□□□□□ -1.6
ULP1	YPL020C	THI12	P42883	340 aa		5.03	□□□□□ -1.6
ULP1	YPL020C	THI5	P43534	340 aa		5.03	□□□□□ -1.6
ULP1	YPL020C	THI11	P47183	340 aa		5.03	□□□□□ -1.6
ULP1	YPL020C	OYE2	Q03558	400 aa	Known RBP	5.03	□□□□□ -1.6
ULP1	YPL020C	CWC15	Q03772	175 aa	Known RBP	5.03	□□□□□ -1.6
ULP1	YPL020C	THI13	Q07748	340 aa		5.03	□□□□□ -1.6
ULP1	YPL020C	YPR015C	Q12531	247 aa		5.03	□□□□□ -1.6
ULP1	YPL020C	SEC8	P32855	1065 aa		5.03	□□□□□ -1.6
ULP1	YPL020C	STB3	Q12427	513 aa		5.03	□□□□□ -1.6
ULP1	YPL020C	SLI15	P38283	698 aa		5.02	□□□□□ -1.61
ULP1	YPL020C	JIP5	Q06214	492 aa	Predicted RBP	5.02	□□□□□ -1.61
ULP1	YPL020C	ATG1	P53104	897 aa		5.01	□□□□□ -1.61
ULP1	YPL020C	TRM1	P15565	570 aa	Known RBP	5	□□□□□ -1.61
ULP1	YPL020C	PEX21	P50091	288 aa		5	□□□□□ -1.61
ULP1	YPL020C	PUF6	Q04373	656 aa	Known RBP	5	□□□□□ -1.61
ULP1	YPL020C	ENV9	Q08651	330 aa		5	□□□□□ -1.61
ULP1	YPL020C	YOL098C	Q12496	1037 aa		5	□□□□□ -1.61
ULP1	YPL020C	RTF1	P53064	558 aa		5	□□□□□ -1.61
ULP1	YPL020C	YNL115C	P53925	644 aa		5	□□□□□ -1.61
ULP1	YPL020C	MAG2	Q06436	670 aa	Known RBP	5	□□□□□ -1.61
ULP1	YPL020C	RAM1	P22007	431 aa		4.99	□□□□□ -1.61
ULP1	YPL020C	ISF1	P32488	338 aa		4.99	□□□□□ -1.61
ULP1	YPL020C	MGE1	P38523	228 aa		4.99	□□□□□ -1.61
ULP1	YPL020C	BOL3	P39724	118 aa		4.99	□□□□□ -1.61
ULP1	YPL020C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	4.99	□□□□□ -1.61	not detected
ULP1	YPL020C	YJR107W	P47145	328 aa		4.99	□□□□□ -1.61
ULP1	YPL020C	RNH70	P53331	553 aa		4.99	□□□□□ -1.61
ULP1	YPL020C	CDC73	Q06697	393 aa		4.99	□□□□□ -1.61
ULP1	YPL020C	TUM1	Q08686	304 aa	Known RBP	4.99	□□□□□ -1.61
ULP1	YPL020C	ISU2	Q12056	156 aa		4.99	□□□□□ -1.61
ULP1	YPL020C	ATG36	P46983	293 aa		4.98	□□□□□ -1.61
ULP1	YPL020C	PNP1	Q05788	311 aa		4.98	□□□□□ -1.61
ULP1	YPL020C	PHO87	P25360	923 aa		4.98	□□□□□ -1.61
ULP1	YPL020C	MET1	P36150	593 aa		4.98	□□□□□ -1.61
ULP1	YPL020C	EMP47	P43555	445 aa		4.98	□□□□□ -1.61
ULP1	YPL020C	PUS6	P53294	404 aa		4.97	□□□□□ -1.61
ULP1	YPL020C	NUT2	Q06213	157 aa		4.97	□□□□□ -1.61
ULP1	YPL020C	HAP4	P14064	554 aa		4.96	□□□□□ -1.61
ULP1	YPL020C	NUG1	P40010	520 aa	Known RBP	4.96	□□□□□ -1.61
ULP1	YPL020C	RTS3	P53289	263 aa		4.96	□□□□□ -1.61
ULP1	YPL020C	FRT1	Q99332	602 aa		4.96	□□□□□ -1.61
ULP1	YPL020C	FUR4	P05316	633 aa	Known RBP	4.96	□□□□□ -1.62
ULP1	YPL020C	GLO3	P38682	493 aa	Known RBP	4.96	□□□□□ -1.62
ULP1	YPL020C	SRS2	P12954	1174 aa		4.95	□□□□□ -1.62
ULP1	YPL020C	MET4	P32389	672 aa		4.95	□□□□□ -1.62
ULP1	YPL020C	ATG3	P40344	310 aa		4.95	□□□□□ -1.62
ULP1	YPL020C	QDR1	P40475	563 aa		4.95	□□□□□ -1.62
ULP1	YPL020C	YJR008W	P47085	338 aa		4.95	□□□□□ -1.62
ULP1	YPL020C	ACF4	P47129	309 aa		4.95	□□□□□ -1.62
ULP1	YPL020C	ROM1	P53046	1155 aa		4.95	□□□□□ -1.62
ULP1	YPL020C	TBF1	Q02457	562 aa		4.95	□□□□□ -1.62
ULP1	YPL020C	SAS4	Q04003	481 aa		4.95	□□□□□ -1.62
ULP1	YPL020C	PPG1	P32838	368 aa		4.94	□□□□□ -1.62
ULP1	YPL020C	VAC8	P39968	578 aa		4.94	□□□□□ -1.62
ULP1	YPL020C	ACS2	P52910	683 aa	Known RBP	4.94	□□□□□ -1.62
ULP1	YPL020C	PUN1	Q06991	263 aa		4.94	□□□□□ -1.62
ULP1	YPL020C	SDH2	P21801	266 aa		4.94	□□□□□ -1.62
ULP1	YPL020C	RRP14	P36080	434 aa	Known RBP	4.94	□□□□□ -1.62
ULP1	YPL020C	FPR3	P38911	411 aa	Known RBP	4.94	□□□□□ -1.62
ULP1	YPL020C	ALD3	P54114	506 aa		4.94	□□□□□ -1.62
ULP1	YPL020C	MNL2	Q12205	849 aa		4.94	□□□□□ -1.62
ULP1	YPL020C	SRP40	P32583	406 aa	Predicted RBP	4.93	□□□□□ -1.62
ULP1	YPL020C	FYV10	P40492	516 aa		4.93	□□□□□ -1.62
ULP1	YPL020C	FRA1	Q07825	749 aa		4.93	□□□□□ -1.62
ULP1	YPL020C	GAS4	Q08271	471 aa		4.93	□□□□□ -1.62
ULP1	YPL020C	YRR1	Q12172	810 aa		4.93	□□□□□ -1.62
ULP1	YPL020C	ALD6	P54115	500 aa	Known RBP	4.92	□□□□□ -1.62
ULP1	YPL020C	KEX2	P13134	814 aa		4.92	□□□□□ -1.62
ULP1	YPL020C	TEC1	P18412	486 aa		4.92	□□□□□ -1.62
ULP1	YPL020C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.92	□□□□□ -1.62	not detected
ULP1	YPL020C	IOC3	P43596	787 aa		4.92	□□□□□ -1.62
ULP1	YPL020C	OSW7	P43611	510 aa		4.92	□□□□□ -1.62
ULP1	YPL020C	STE20	Q03497	939 aa	Known RBP	4.92	□□□□□ -1.62
ULP1	YPL020C	UTP13	Q05946	817 aa	Known RBP	4.92	□□□□□ -1.62
ULP1	YPL020C	CIT2	P08679	460 aa		4.91	□□□□□ -1.62
ULP1	YPL020C	GUT2	P32191	649 aa		4.91	□□□□□ -1.62
ULP1	YPL020C	YKL091C	P33324	310 aa	Known RBP	4.91	□□□□□ -1.62
ULP1	YPL020C	GAR1	P28007	205 aa	Known RBP	4.9	□□□□□ -1.62
ULP1	YPL020C	SOH1	P38633	127 aa		4.9	□□□□□ -1.62
ULP1	YPL020C	MAD1	P40957	749 aa		4.9	□□□□□ -1.62
ULP1	YPL020C	APL6	P46682	809 aa		4.9	□□□□□ -1.62
ULP1	YPL020C	ALG12	P53730	551 aa		4.9	□□□□□ -1.62
ULP1	YPL020C	VPS16	Q03308	798 aa		4.9	□□□□□ -1.62
ULP1	YPL020C	UBX5	Q06682	500 aa		4.9	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 11.4 ms