RNA–Protein interactions for RNA: YOR340C

RPA43, Transcript of RNA polymerase I subunit A43, yeastyeast

Gene RPA43, Length 981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA43YOR340C YDL176WQ12027 708 aa6.09□□□□□ -1.43
RPA43YOR340C ARG8P18544 423 aa6.08□□□□□ -1.44
RPA43YOR340C BUB1P41695 1021 aaKnown RBP RIP-Chip data6.08□□□□□ -1.44not detected
RPA43YOR340C HXT10P43581 546 aa6.08□□□□□ -1.44
RPA43YOR340C HST3P53687 447 aa6.08□□□□□ -1.44
RPA43YOR340C TBF1Q02457 562 aa6.08□□□□□ -1.44
RPA43YOR340C YDL206WQ12424 762 aa6.08□□□□□ -1.44
RPA43YOR340C RPA14P50106 137 aa6.07□□□□□ -1.44
RPA43YOR340C RAD59Q12223 238 aa6.07□□□□□ -1.44
RPA43YOR340C RSC30P38781 883 aa6.06□□□□□ -1.44
RPA43YOR340C RRD1P40454 393 aaKnown RBP6.05□□□□□ -1.44
RPA43YOR340C YPR097WQ06839 1073 aa6.05□□□□□ -1.44
RPA43YOR340C ALR1Q08269 859 aa6.05□□□□□ -1.44
RPA43YOR340C PKC1P24583 1151 aa6.04□□□□□ -1.44
RPA43YOR340C HIR3P47171 1648 aa6.03□□□□□ -1.44
RPA43YOR340C YBL036CP38197 257 aa6.03□□□□□ -1.44
RPA43YOR340C YJR115WP47152 169 aa6.03□□□□□ -1.44
RPA43YOR340C MSB3P48566 633 aaPredicted RBP6.03□□□□□ -1.44
RPA43YOR340C SPA2P23201 1466 aaKnown RBP6.02□□□□□ -1.45
RPA43YOR340C SYH1Q02875 849 aaKnown RBP6□□□□□ -1.45
RPA43YOR340C CSE4P36012 229 aa5.98□□□□□ -1.45
RPA43YOR340C YJL007CP47080 104 aa5.98□□□□□ -1.45
RPA43YOR340C MAK16P10962 306 aaPredicted RBP5.96□□□□□ -1.46
RPA43YOR340C KIP2P28743 706 aa5.96□□□□□ -1.46
RPA43YOR340C IXR1P33417 597 aa5.96□□□□□ -1.46
RPA43YOR340C BIO2P32451 375 aa5.95□□□□□ -1.46
RPA43YOR340C ACO2P39533 789 aa5.95□□□□□ -1.46
RPA43YOR340C VAC17P25591 423 aa5.94□□□□□ -1.46
RPA43YOR340C MRT4P33201 236 aaKnown RBP5.94□□□□□ -1.46
RPA43YOR340C BIM1P40013 344 aa5.94□□□□□ -1.46
RPA43YOR340C RTT106P40161 455 aa5.94□□□□□ -1.46
RPA43YOR340C RPL34BP40525 121 aaKnown RBP5.94□□□□□ -1.46
RPA43YOR340C ITT1Q04638 464 aa5.94□□□□□ -1.46
RPA43YOR340C SPT5P27692 1063 aaKnown RBP5.93□□□□□ -1.46
RPA43YOR340C UGA3P26370 528 aa5.92□□□□□ -1.46
RPA43YOR340C FIG4P42837 879 aa5.92□□□□□ -1.46
RPA43YOR340C PTK2P47116 818 aaKnown RBP5.92□□□□□ -1.46
RPA43YOR340C RLF2Q12495 606 aa5.92□□□□□ -1.46
RPA43YOR340C XRN1P22147 1528 aaKnown RBP5.92□□□□□ -1.46
RPA43YOR340C ECM5Q03214 1411 aa5.91□□□□□ -1.46
RPA43YOR340C ATG32P40458 529 aa5.91□□□□□ -1.46
RPA43YOR340C YNL108CP53929 270 aa5.91□□□□□ -1.46
RPA43YOR340C THO2P53552 1597 aaKnown RBP5.91□□□□□ -1.46
RPA43YOR340C SSN2P38931 1420 aa5.91□□□□□ -1.46
RPA43YOR340C NAF1P53919 492 aaKnown RBP5.9□□□□□ -1.46
RPA43YOR340C OPT2Q06593 877 aa5.9□□□□□ -1.46
RPA43YOR340C GLY1P37303 387 aaKnown RBP5.89□□□□□ -1.47
RPA43YOR340C YLR346CQ06139 101 aa5.89□□□□□ -1.47
RPA43YOR340C TIF1P10081 395 aaKnown RBP5.88□□□□□ -1.47
RPA43YOR340C TEC1P18412 486 aa5.88□□□□□ -1.47
RPA43YOR340C YDJ1P25491 409 aaKnown RBP5.88□□□□□ -1.47
RPA43YOR340C NUP85P46673 744 aa5.88□□□□□ -1.47
RPA43YOR340C CAF120P53836 1060 aa5.88□□□□□ -1.47
RPA43YOR340C BUD4P47136 1447 aa5.88□□□□□ -1.47
RPA43YOR340C APP1P53933 587 aa5.87□□□□□ -1.47
RPA43YOR340C SRF1Q12516 437 aa5.87□□□□□ -1.47
RPA43YOR340C RTG2P32608 588 aaKnown RBP5.86□□□□□ -1.47
RPA43YOR340C YPR084WQ06821 456 aa5.86□□□□□ -1.47
RPA43YOR340C MCM16Q12262 181 aa5.86□□□□□ -1.47
RPA43YOR340C ENO2P00925 437 aaKnown RBP5.85□□□□□ -1.47
RPA43YOR340C SUP45P12385 437 aaKnown RBP5.85□□□□□ -1.47
RPA43YOR340C YPP1P46951 817 aa5.85□□□□□ -1.47
RPA43YOR340C YPR204WQ08995 1032 aa5.85□□□□□ -1.47
RPA43YOR340C MDS3P53094 1487 aa5.84□□□□□ -1.47
RPA43YOR340C GUT2P32191 649 aa5.84□□□□□ -1.47
RPA43YOR340C EMW1P42842 904 aaKnown RBP5.84□□□□□ -1.47
RPA43YOR340C PEP1P32319 1579 aa5.84□□□□□ -1.48
RPA43YOR340C STE20Q03497 939 aaKnown RBP5.83□□□□□ -1.48
RPA43YOR340C ATG2P53855 1592 aa5.83□□□□□ -1.48
RPA43YOR340C REV3P14284 1504 aa5.83□□□□□ -1.48
RPA43YOR340C TRK2P28584 889 aa5.82□□□□□ -1.48
RPA43YOR340C ISF1P32488 338 aa5.82□□□□□ -1.48
RPA43YOR340C YBL086CP38177 466 aa5.82□□□□□ -1.48
RPA43YOR340C EMP47P43555 445 aa5.82□□□□□ -1.48
RPA43YOR340C SCW11P53189 542 aa5.82□□□□□ -1.48
RPA43YOR340C TY1A-BLQ12266 440 aa5.82□□□□□ -1.48
RPA43YOR340C MIP1P15801 1254 aa5.81□□□□□ -1.48
RPA43YOR340C YIR007WP40566 764 aa5.81□□□□□ -1.48
RPA43YOR340C RIM21P48565 533 aa5.81□□□□□ -1.48
RPA43YOR340C YGR035CP53222 116 aa5.81□□□□□ -1.48
RPA43YOR340C ENO1P00924 437 aaKnown RBP5.8□□□□□ -1.48
RPA43YOR340C FRA1Q07825 749 aa5.8□□□□□ -1.48
RPA43YOR340C AAD14P42884 376 aa5.79□□□□□ -1.48
RPA43YOR340C MRX12P47084 519 aa5.79□□□□□ -1.48
RPA43YOR340C ARG82P07250 355 aa5.78□□□□□ -1.48
RPA43YOR340C ATG3P40344 310 aa5.78□□□□□ -1.48
RPA43YOR340C HPF1Q05164 967 aa5.78□□□□□ -1.48
RPA43YOR340C MKS1P34072 584 aa5.77□□□□□ -1.49
RPA43YOR340C LSC2P53312 427 aa5.77□□□□□ -1.49
RPA43YOR340C DFG5Q05031 458 aa5.77□□□□□ -1.49
RPA43YOR340C MRX10Q05648 414 aa5.77□□□□□ -1.49
RPA43YOR340C SIN3P22579 1536 aa5.76□□□□□ -1.49
RPA43YOR340C UBP2Q01476 1272 aa5.76□□□□□ -1.49
RPA43YOR340C SIS2P36024 562 aa5.75□□□□□ -1.49
RPA43YOR340C TAF2P23255 1407 aa5.74□□□□□ -1.49
RPA43YOR340C CPS1P27614 576 aa5.74□□□□□ -1.49
RPA43YOR340C TTI1P36097 1038 aa5.74□□□□□ -1.49
RPA43YOR340C YJR098CP47139 656 aa5.74□□□□□ -1.49
RPA43YOR340C ATG20Q07528 640 aa5.74□□□□□ -1.49
RPA43YOR340C SSK2P53599 1579 aa5.73□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms