RNA–Protein interactions for RNA: YOR003W

YSP3, Transcript of Putative precursor to the subtilisin-like protease III, yeast

Gene YSP3, Length 1,437 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YSP3	YOR003W	ATG13	Q06628	738 aa		13.89	□□□□□ -0.19
YSP3	YOR003W	INP54	Q08227	384 aa	Known RBP	13.89	□□□□□ -0.19
YSP3	YOR003W	SPT7	P35177	1332 aa		13.88	□□□□□ -0.19
YSP3	YOR003W	HSP104	P31539	908 aa	Known RBP	13.88	□□□□□ -0.19
YSP3	YOR003W	PRY3	P47033	881 aa		13.86	□□□□□ -0.19
YSP3	YOR003W	OSM1	P21375	501 aa	Known RBP	13.85	□□□□□ -0.19
YSP3	YOR003W	AKL1	P38080	1108 aa	Known RBP	13.85	□□□□□ -0.19
YSP3	YOR003W	CTH1	P47976	325 aa		13.83	□□□□□ -0.2
YSP3	YOR003W	RRP46	P53256	223 aa	Predicted RBP	13.83	□□□□□ -0.2
YSP3	YOR003W	ALD2	P47771	506 aa		13.81	□□□□□ -0.2
YSP3	YOR003W	NUP145	P49687	1317 aa		13.81	□□□□□ -0.2
YSP3	YOR003W	SSA2	P10592	639 aa	Known RBP	13.81	□□□□□ -0.2
YSP3	YOR003W	UGA2	P38067	497 aa		13.81	□□□□□ -0.2
YSP3	YOR003W	TSR3	Q12094	313 aa	Known RBP	13.81	□□□□□ -0.2
YSP3	YOR003W	GTT3	P39996	337 aa		13.78	□□□□□ -0.2
YSP3	YOR003W	YBP2	P53169	641 aa		13.77	□□□□□ -0.21
YSP3	YOR003W	MSB4	Q12317	492 aa		13.77	□□□□□ -0.21
YSP3	YOR003W	CTF4	Q01454	927 aa		13.76	□□□□□ -0.21
YSP3	YOR003W	AOS1	Q06624	347 aa		13.76	□□□□□ -0.21
YSP3	YOR003W	NTH2	P35172	780 aa		13.74	□□□□□ -0.21
YSP3	YOR003W	RTR1	P40084	226 aa	Predicted RBP	13.74	□□□□□ -0.21
YSP3	YOR003W	GRX1	P25373	110 aa	Known RBP	13.73	□□□□□ -0.21
YSP3	YOR003W	TUM1	Q08686	304 aa	Known RBP	13.73	□□□□□ -0.21
YSP3	YOR003W	GRE2	Q12068	342 aa	Known RBP	13.73	□□□□□ -0.21
YSP3	YOR003W	BDF1	P35817	686 aa		13.7	□□□□□ -0.22
YSP3	YOR003W	PRD1	P25375	712 aa		13.68	□□□□□ -0.22
YSP3	YOR003W	KCC4	P25389	1037 aa		13.68	□□□□□ -0.22
YSP3	YOR003W	ALE1	Q08548	619 aa		13.68	□□□□□ -0.22
YSP3	YOR003W	BUG1	Q12191	341 aa		13.68	□□□□□ -0.22
YSP3	YOR003W	RAD4	P14736	754 aa		13.67	□□□□□ -0.22
YSP3	YOR003W	MPP10	P47083	593 aa	Known RBP	13.66	□□□□□ -0.22
YSP3	YOR003W	ALD3	P54114	506 aa		13.66	□□□□□ -0.22
YSP3	YOR003W	RMT2	Q03305	412 aa		13.64	□□□□□ -0.23
YSP3	YOR003W	YNL050C	P53952	270 aa		13.64	□□□□□ -0.23
YSP3	YOR003W	THI22	Q06490	572 aa		13.63	□□□□□ -0.23
YSP3	YOR003W	IOC4	Q04213	475 aa		13.62	□□□□□ -0.23
YSP3	YOR003W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	13.61	□□□□□ -0.23	not detected
YSP3	YOR003W	YDL144C	Q07589	356 aa		13.61	□□□□□ -0.23
YSP3	YOR003W	NOP53	Q12080	455 aa	Known RBP	13.6	□□□□□ -0.23
YSP3	YOR003W	YBR287W	P38355	427 aa		13.59	□□□□□ -0.23
YSP3	YOR003W	UGA3	P26370	528 aa		13.58	□□□□□ -0.24
YSP3	YOR003W	ZDS1	P50111	915 aa	Known RBP	13.58	□□□□□ -0.24
YSP3	YOR003W	UTP22	P53254	1237 aa	Predicted RBP	13.58	□□□□□ -0.24
YSP3	YOR003W	HPC2	Q01448	625 aa		13.58	□□□□□ -0.24
YSP3	YOR003W	RTT109	Q07794	436 aa		13.58	□□□□□ -0.24
YSP3	YOR003W	NYV1	Q12255	253 aa		13.58	□□□□□ -0.24
YSP3	YOR003W	TOS1	P38288	455 aa		13.57	□□□□□ -0.24
YSP3	YOR003W	TEA1	P47988	759 aa		13.57	□□□□□ -0.24
YSP3	YOR003W	NSE3	Q05541	303 aa		13.57	□□□□□ -0.24
YSP3	YOR003W	RIX7	Q07844	837 aa	Known RBP	13.56	□□□□□ -0.24
YSP3	YOR003W	RRT14	P40470	206 aa		13.56	□□□□□ -0.24
YSP3	YOR003W	CTI6	Q08923	506 aa		13.56	□□□□□ -0.24
YSP3	YOR003W	TPD3	P31383	635 aa		13.55	□□□□□ -0.24
YSP3	YOR003W	COQ4	O13525	335 aa		13.54	□□□□□ -0.24
YSP3	YOR003W	SER1	P33330	395 aa	Known RBP	13.54	□□□□□ -0.24
YSP3	YOR003W	SAP155	P43612	1002 aa		13.54	□□□□□ -0.24
YSP3	YOR003W	BMS1	Q08965	1183 aa	Known RBP	13.54	□□□□□ -0.24
YSP3	YOR003W	EAF6	P47128	113 aa		13.53	□□□□□ -0.24
YSP3	YOR003W	SPT21	P35209	758 aa		13.52	□□□□□ -0.25
YSP3	YOR003W	MAM1	P40065	302 aa		13.52	□□□□□ -0.25
YSP3	YOR003W	YGL082W	P53155	381 aa		13.52	□□□□□ -0.25
YSP3	YOR003W	UTP10	P42945	1769 aa	Known RBP	13.52	□□□□□ -0.25
YSP3	YOR003W	HEF3	P53978	1044 aa	Known RBP	13.51	□□□□□ -0.25
YSP3	YOR003W	ZDS2	P54786	942 aa		13.51	□□□□□ -0.25
YSP3	YOR003W	PHM7	Q12252	991 aa		13.51	□□□□□ -0.25
YSP3	YOR003W	YFR016C	P43597	1233 aa	Known RBP	13.5	□□□□□ -0.25
YSP3	YOR003W	APL2	P36000	726 aa	Predicted RBP	13.49	□□□□□ -0.25
YSP3	YOR003W	GYP7	P48365	746 aa		13.49	□□□□□ -0.25
YSP3	YOR003W	MDG1	P53885	366 aa		13.49	□□□□□ -0.25
YSP3	YOR003W	SSP2	Q08646	371 aa		13.49	□□□□□ -0.25
YSP3	YOR003W	MSN5	P52918	1224 aa		13.48	□□□□□ -0.25
YSP3	YOR003W	VPS64	Q03944	604 aa		13.48	□□□□□ -0.25
YSP3	YOR003W	SUI2	P20459	304 aa	Known RBP	13.47	□□□□□ -0.25
YSP3	YOR003W	LYS2	P07702	1392 aa		13.46	□□□□□ -0.26
YSP3	YOR003W	DCD1	P06773	312 aa		13.46	□□□□□ -0.26
YSP3	YOR003W	ARG8	P18544	423 aa		13.46	□□□□□ -0.26
YSP3	YOR003W	LPD1	P09624	499 aa	Known RBP	13.45	□□□□□ -0.26
YSP3	YOR003W	SSA1	P10591	642 aa	Known RBP	13.43	□□□□□ -0.26
YSP3	YOR003W	YOL057W	Q08225	711 aa		13.43	□□□□□ -0.26
YSP3	YOR003W	YPR204W	Q08995	1032 aa		13.43	□□□□□ -0.26
YSP3	YOR003W	SRT1	Q03175	343 aa		13.42	□□□□□ -0.26
YSP3	YOR003W	RPP0	P05317	312 aa	Known RBP	13.41	□□□□□ -0.26
YSP3	YOR003W	RIM101	P33400	625 aa		13.41	□□□□□ -0.26
YSP3	YOR003W	VPS27	P40343	622 aa	Known RBP	13.4	□□□□□ -0.26
YSP3	YOR003W	CWH41	P53008	833 aa		13.4	□□□□□ -0.26
YSP3	YOR003W	RAT1	Q02792	1006 aa	Known RBP	13.39	□□□□□ -0.27
YSP3	YOR003W	CTT1	P06115	562 aa		13.38	□□□□□ -0.27
YSP3	YOR003W	ERT1	P38140	529 aa		13.37	□□□□□ -0.27
YSP3	YOR003W	KIN4	Q01919	800 aa		13.37	□□□□□ -0.27
YSP3	YOR003W	CAF20	P12962	161 aa	Known RBP	13.36	□□□□□ -0.27
YSP3	YOR003W	YKL222C	P35995	705 aa		13.36	□□□□□ -0.27
YSP3	YOR003W	CDC45	Q08032	650 aa		13.36	□□□□□ -0.27
YSP3	YOR003W	PMD1	P32634	1753 aa		13.36	□□□□□ -0.27
YSP3	YOR003W	YER156C	P40093	338 aa	Known RBP	13.35	□□□□□ -0.27
YSP3	YOR003W	BDF2	Q07442	638 aa		13.35	□□□□□ -0.27
YSP3	YOR003W	RVB2	Q12464	471 aa	Known RBP	13.35	□□□□□ -0.27
YSP3	YOR003W	SMY1	P32364	656 aa	Known RBP	13.34	□□□□□ -0.27
YSP3	YOR003W	PFF1	P38244	976 aa		13.34	□□□□□ -0.27
YSP3	YOR003W	YGR122W	P53272	402 aa		13.34	□□□□□ -0.27
YSP3	YOR003W	PKH1	Q03407	766 aa		13.34	□□□□□ -0.27

Retrieved 100 of 5,963 RNA–protein pairs in 42.2 ms