RNA–Protein interactions for RNA: YNL053W

MSG5, Transcript of Dual-specificity protein phosphatase, yeastyeast

Gene MSG5, Length 1,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSG5YNL053W CST9Q06032 482 aa8.67□□□□□ -1.02
MSG5YNL053W RPS24AP0CX31 135 aaKnown RBP8.66□□□□□ -1.02
MSG5YNL053W RPS24BP0CX32 135 aaKnown RBP8.66□□□□□ -1.02
MSG5YNL053W GRX4P32642 244 aa8.66□□□□□ -1.02
MSG5YNL053W FPR3P38911 411 aaKnown RBP8.65□□□□□ -1.02
MSG5YNL053W SAP155P43612 1002 aa8.65□□□□□ -1.02
MSG5YNL053W YRB30P53107 440 aaPredicted RBP8.65□□□□□ -1.02
MSG5YNL053W GAS4Q08271 471 aa8.65□□□□□ -1.02
MSG5YNL053W TPD3P31383 635 aa8.64□□□□□ -1.03
MSG5YNL053W ADE6P38972 1358 aaKnown RBP8.64□□□□□ -1.03
MSG5YNL053W DPS1P04802 557 aaKnown RBP8.64□□□□□ -1.03
MSG5YNL053W PRD1P25375 712 aa8.64□□□□□ -1.03
MSG5YNL053W THI22Q06490 572 aa8.64□□□□□ -1.03
MSG5YNL053W TY4B-HP0C2J7 1802 aa8.63□□□□□ -1.03
MSG5YNL053W TY4B-JP47024 1803 aa8.63□□□□□ -1.03
MSG5YNL053W RPO41P13433 1351 aaKnown RBP8.62□□□□□ -1.03
MSG5YNL053W NAB6Q03735 1134 aaKnown RBP RIP-Chip data8.62□□□□□ -1.03not detected
MSG5YNL053W MSB4Q12317 492 aa8.6□□□□□ -1.03
MSG5YNL053W YRF1-2P40105 1681 aa8.59□□□□□ -1.03
MSG5YNL053W RAD2P07276 1031 aa8.59□□□□□ -1.03
MSG5YNL053W RPC31P17890 251 aa8.59□□□□□ -1.03
MSG5YNL053W RTG1P32607 177 aa8.59□□□□□ -1.03
MSG5YNL053W EAP1P36041 632 aaKnown RBP8.59□□□□□ -1.03
MSG5YNL053W BUB1P41695 1021 aaKnown RBP RIP-Chip data8.59□□□□□ -1.03not detected
MSG5YNL053W PRP43P53131 767 aaKnown RBP8.59□□□□□ -1.03
MSG5YNL053W HEF3P53978 1044 aaKnown RBP8.59□□□□□ -1.03
MSG5YNL053W YMR196WQ04336 1088 aa8.59□□□□□ -1.03
MSG5YNL053W RTT109Q07794 436 aa8.59□□□□□ -1.03
MSG5YNL053W DAL5P15365 543 aa8.58□□□□□ -1.04
MSG5YNL053W THI12P42883 340 aa8.58□□□□□ -1.04
MSG5YNL053W THI5P43534 340 aa8.58□□□□□ -1.04
MSG5YNL053W THI11P47183 340 aa8.58□□□□□ -1.04
MSG5YNL053W THI13Q07748 340 aa8.58□□□□□ -1.04
MSG5YNL053W NCR1Q12200 1170 aa8.57□□□□□ -1.04
MSG5YNL053W RRP5Q05022 1729 aaKnown RBP8.57□□□□□ -1.04
MSG5YNL053W YIL177CP40434 1758 aa8.56□□□□□ -1.04
MSG5YNL053W YJL225CP40889 1758 aa8.56□□□□□ -1.04
MSG5YNL053W SIR4P11978 1358 aa8.56□□□□□ -1.04
MSG5YNL053W YIL092WP40497 633 aa8.56□□□□□ -1.04
MSG5YNL053W MRM1P25270 412 aa8.55□□□□□ -1.04
MSG5YNL053W AKL1P38080 1108 aaKnown RBP8.55□□□□□ -1.04
MSG5YNL053W APC1P53886 1748 aa8.54□□□□□ -1.04
MSG5YNL053W TRP5P00931 707 aaKnown RBP8.54□□□□□ -1.04
MSG5YNL053W SET4P42948 560 aa8.54□□□□□ -1.04
MSG5YNL053W BUD27P43573 796 aaKnown RBP RIP-Chip data8.54□□□□□ -1.04not detected
MSG5YNL053W YRF1-4O13559 1382 aa8.54□□□□□ -1.04
MSG5YNL053W MAK21Q12176 1025 aaKnown RBP8.53□□□□□ -1.04
MSG5YNL053W YOL036WQ08206 761 aa8.52□□□□□ -1.05
MSG5YNL053W DSD1P53095 428 aa8.51□□□□□ -1.05
MSG5YNL053W FKS3Q04952 1785 aa8.51□□□□□ -1.05
MSG5YNL053W URB1P34241 1764 aaKnown RBP8.51□□□□□ -1.05
MSG5YNL053W POL32P47110 350 aa8.51□□□□□ -1.05
MSG5YNL053W YBR287WP38355 427 aa8.48□□□□□ -1.05
MSG5YNL053W RRT14P40470 206 aa8.48□□□□□ -1.05
MSG5YNL053W PUF6Q04373 656 aaKnown RBP8.48□□□□□ -1.05
MSG5YNL053W PRP5P21372 849 aaPredicted RBP8.47□□□□□ -1.05
MSG5YNL053W PRP45P28004 379 aaPredicted RBP8.47□□□□□ -1.05
MSG5YNL053W HSP104P31539 908 aaKnown RBP8.47□□□□□ -1.05
MSG5YNL053W NTH2P35172 780 aa8.47□□□□□ -1.05
MSG5YNL053W GYP7P48365 746 aa8.47□□□□□ -1.05
MSG5YNL053W YNL050CP53952 270 aa8.47□□□□□ -1.05
MSG5YNL053W YNL035CP53962 389 aaKnown RBP8.47□□□□□ -1.05
MSG5YNL053W SEC61P32915 480 aa8.46□□□□□ -1.05
MSG5YNL053W ZDS1P50111 915 aaKnown RBP8.46□□□□□ -1.05
MSG5YNL053W MSB3P48566 633 aaPredicted RBP8.45□□□□□ -1.06
MSG5YNL053W MAM1P40065 302 aa8.44□□□□□ -1.06
MSG5YNL053W YFR016CP43597 1233 aaKnown RBP8.44□□□□□ -1.06
MSG5YNL053W SRT1Q03175 343 aa8.44□□□□□ -1.06
MSG5YNL053W AOS1Q06624 347 aa8.44□□□□□ -1.06
MSG5YNL053W SLM3Q12093 417 aa8.44□□□□□ -1.06
MSG5YNL053W XKS1P42826 600 aa8.42□□□□□ -1.06
MSG5YNL053W BMS1Q08965 1183 aaKnown RBP8.42□□□□□ -1.06
MSG5YNL053W EDE1P34216 1381 aa8.42□□□□□ -1.06
MSG5YNL053W DBP1P24784 617 aaKnown RBP8.41□□□□□ -1.06
MSG5YNL053W RAM2P29703 316 aa8.41□□□□□ -1.06
MSG5YNL053W OPY1P38271 328 aa8.41□□□□□ -1.06
MSG5YNL053W COQ4O13525 335 aa8.4□□□□□ -1.06
MSG5YNL053W CSI1Q04368 295 aa8.4□□□□□ -1.06
MSG5YNL053W TCB1Q12466 1186 aa8.4□□□□□ -1.06
MSG5YNL053W IME2P32581 645 aa8.39□□□□□ -1.07
MSG5YNL053W ILV3P39522 585 aaKnown RBP8.39□□□□□ -1.07
MSG5YNL053W YFR006WP43590 535 aa8.39□□□□□ -1.07
MSG5YNL053W YPP1P46951 817 aa8.39□□□□□ -1.07
MSG5YNL053W YMR1P47147 688 aaKnown RBP RIP-Chip data8.39□□□□□ -1.07not detected
MSG5YNL053W RCR1P38212 213 aa8.38□□□□□ -1.07
MSG5YNL053W CTF4Q01454 927 aa8.38□□□□□ -1.07
MSG5YNL053W MIF2P35201 549 aa8.38□□□□□ -1.07
MSG5YNL053W VPS29P38759 282 aa8.38□□□□□ -1.07
MSG5YNL053W YNG2P38806 282 aaKnown RBP8.38□□□□□ -1.07
MSG5YNL053W TFG1P41895 735 aaPredicted RBP8.38□□□□□ -1.07
MSG5YNL053W SPO1P53541 631 aa8.38□□□□□ -1.07
MSG5YNL053W NSE3Q05541 303 aa8.38□□□□□ -1.07
MSG5YNL053W RSF2P46974 1380 aa8.37□□□□□ -1.07
MSG5YNL053W KCC4P25389 1037 aa8.37□□□□□ -1.07
MSG5YNL053W UGA3P26370 528 aa8.37□□□□□ -1.07
MSG5YNL053W SET1P38827 1080 aaKnown RBP8.37□□□□□ -1.07
MSG5YNL053W EAF7P53911 425 aaKnown RBP8.37□□□□□ -1.07
MSG5YNL053W NUP145P49687 1317 aa8.36□□□□□ -1.07
MSG5YNL053W YIR014WP40570 242 aa8.36□□□□□ -1.07
MSG5YNL053W NOP8Q08287 484 aaPredicted RBP8.36□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 37.3 ms