RNA–Protein interactions for RNA: YMR153W

NUP53, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene NUP53, Length 1,428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP53YMR153W OSM1P21375 501 aaKnown RBP10.07□□□□□ -0.8
NUP53YMR153W PAP2P53632 584 aaKnown RBP10.07□□□□□ -0.8
NUP53YMR153W GRX1P25373 110 aaKnown RBP10.06□□□□□ -0.8
NUP53YMR153W HSP104P31539 908 aaKnown RBP10.05□□□□□ -0.8
NUP53YMR153W GRE2Q12068 342 aaKnown RBP10.05□□□□□ -0.8
NUP53YMR153W RAD4P14736 754 aa10.04□□□□□ -0.8
NUP53YMR153W YBP2P53169 641 aa10.04□□□□□ -0.8
NUP53YMR153W DSD1P53095 428 aa10.03□□□□□ -0.8
NUP53YMR153W NUP145P49687 1317 aa10.02□□□□□ -0.81
NUP53YMR153W HPC2Q01448 625 aa10.01□□□□□ -0.81
NUP53YMR153W TRK1P12685 1235 aa9.99□□□□□ -0.81
NUP53YMR153W UTP22P53254 1237 aaPredicted RBP9.99□□□□□ -0.81
NUP53YMR153W NST1P53935 1240 aa9.99□□□□□ -0.81
NUP53YMR153W AKL1P38080 1108 aaKnown RBP9.99□□□□□ -0.81
NUP53YMR153W SAP155P43612 1002 aa9.99□□□□□ -0.81
NUP53YMR153W EAF6P47128 113 aa9.99□□□□□ -0.81
NUP53YMR153W CTF4Q01454 927 aa9.99□□□□□ -0.81
NUP53YMR153W TOS1P38288 455 aa9.98□□□□□ -0.81
NUP53YMR153W MSN5P52918 1224 aa9.96□□□□□ -0.82
NUP53YMR153W AOS1Q06624 347 aa9.96□□□□□ -0.82
NUP53YMR153W TUM1Q08686 304 aaKnown RBP9.96□□□□□ -0.82
NUP53YMR153W UTP10P42945 1769 aaKnown RBP9.96□□□□□ -0.82
NUP53YMR153W RMT2Q03305 412 aa9.94□□□□□ -0.82
NUP53YMR153W RIX7Q07844 837 aaKnown RBP9.94□□□□□ -0.82
NUP53YMR153W RRT14P40470 206 aa9.92□□□□□ -0.82
NUP53YMR153W KCC4P25389 1037 aa9.91□□□□□ -0.82
NUP53YMR153W BUD27P43573 796 aaKnown RBP RIP-Chip data9.91□□□□□ -0.82not detected
NUP53YMR153W ALE1Q08548 619 aa9.91□□□□□ -0.82
NUP53YMR153W CTI6Q08923 506 aa9.9□□□□□ -0.82
NUP53YMR153W CTT1P06115 562 aa9.9□□□□□ -0.83
NUP53YMR153W NTH2P35172 780 aa9.9□□□□□ -0.83
NUP53YMR153W YER156CP40093 338 aaKnown RBP9.9□□□□□ -0.83
NUP53YMR153W TEA1P47988 759 aa9.9□□□□□ -0.83
NUP53YMR153W PSD2P53037 1138 aaKnown RBP9.9□□□□□ -0.83
NUP53YMR153W NYV1Q12255 253 aa9.9□□□□□ -0.83
NUP53YMR153W NOP53Q12080 455 aaKnown RBP9.89□□□□□ -0.83
NUP53YMR153W SER1P33330 395 aaKnown RBP9.87□□□□□ -0.83
NUP53YMR153W MDG1P53885 366 aa9.87□□□□□ -0.83
NUP53YMR153W YKL222CP35995 705 aa9.86□□□□□ -0.83
NUP53YMR153W CWH41P53008 833 aa9.86□□□□□ -0.83
NUP53YMR153W RRP46P53256 223 aaPredicted RBP9.86□□□□□ -0.83
NUP53YMR153W ERT1P38140 529 aa9.84□□□□□ -0.83
NUP53YMR153W LPD1P09624 499 aaKnown RBP9.83□□□□□ -0.84
NUP53YMR153W UGA3P26370 528 aa9.83□□□□□ -0.84
NUP53YMR153W RTR1P40084 226 aaPredicted RBP9.83□□□□□ -0.84
NUP53YMR153W YFR016CP43597 1233 aaKnown RBP9.83□□□□□ -0.84
NUP53YMR153W YGL082WP53155 381 aa9.83□□□□□ -0.84
NUP53YMR153W SQS1P53866 767 aaKnown RBP9.83□□□□□ -0.84
NUP53YMR153W KIN4Q01919 800 aa9.83□□□□□ -0.84
NUP53YMR153W PHM7Q12252 991 aa9.83□□□□□ -0.84
NUP53YMR153W PMD1P32634 1753 aa9.83□□□□□ -0.84
NUP53YMR153W NSE3Q05541 303 aa9.82□□□□□ -0.84
NUP53YMR153W SSP2Q08646 371 aa9.82□□□□□ -0.84
NUP53YMR153W YNL050CP53952 270 aa9.81□□□□□ -0.84
NUP53YMR153W RAT1Q02792 1006 aaKnown RBP9.81□□□□□ -0.84
NUP53YMR153W PFF1P38244 976 aa9.8□□□□□ -0.84
NUP53YMR153W SMY1P32364 656 aaKnown RBP9.79□□□□□ -0.84
NUP53YMR153W PRD1P25375 712 aa9.78□□□□□ -0.84
NUP53YMR153W IRC3Q06683 689 aa9.78□□□□□ -0.84
NUP53YMR153W BDF2Q07442 638 aa9.77□□□□□ -0.85
NUP53YMR153W TOP1P04786 769 aa9.76□□□□□ -0.85
NUP53YMR153W ZDS1P50111 915 aaKnown RBP9.76□□□□□ -0.85
NUP53YMR153W VPS64Q03944 604 aa9.76□□□□□ -0.85
NUP53YMR153W LYS2P07702 1392 aa9.76□□□□□ -0.85
NUP53YMR153W APL2P36000 726 aaPredicted RBP9.75□□□□□ -0.85
NUP53YMR153W YBR287WP38355 427 aa9.75□□□□□ -0.85
NUP53YMR153W FAS2P19097 1887 aaKnown RBP9.74□□□□□ -0.85
NUP53YMR153W ARG8P18544 423 aa9.73□□□□□ -0.85
NUP53YMR153W ERO1Q03103 563 aa9.73□□□□□ -0.85
NUP53YMR153W DIB1Q06819 143 aaPredicted RBP9.73□□□□□ -0.85
NUP53YMR153W BMS1Q08965 1183 aaKnown RBP9.73□□□□□ -0.85
NUP53YMR153W COQ4O13525 335 aa9.73□□□□□ -0.85
NUP53YMR153W CAF20P12962 161 aaKnown RBP9.73□□□□□ -0.85
NUP53YMR153W MAM1P40065 302 aa9.73□□□□□ -0.85
NUP53YMR153W RRD1P40454 393 aaKnown RBP9.73□□□□□ -0.85
NUP53YMR153W MPP10P47083 593 aaKnown RBP9.73□□□□□ -0.85
NUP53YMR153W ZDS2P54786 942 aa9.73□□□□□ -0.85
NUP53YMR153W DCD1P06773 312 aa9.72□□□□□ -0.85
NUP53YMR153W ICL1P28240 557 aaPredicted RBP9.72□□□□□ -0.85
NUP53YMR153W SLI15P38283 698 aa9.71□□□□□ -0.86
NUP53YMR153W FPK1P53739 893 aa9.71□□□□□ -0.86
NUP53YMR153W THI22Q06490 572 aa9.71□□□□□ -0.86
NUP53YMR153W IOC4Q04213 475 aa9.7□□□□□ -0.86
NUP53YMR153W RTT109Q07794 436 aa9.7□□□□□ -0.86
NUP53YMR153W YPR204WQ08995 1032 aa9.7□□□□□ -0.86
NUP53YMR153W SSA4P22202 642 aaKnown RBP9.69□□□□□ -0.86
NUP53YMR153W RPN1P38764 993 aaKnown RBP9.68□□□□□ -0.86
NUP53YMR153W GYP7P48365 746 aa9.68□□□□□ -0.86
NUP53YMR153W PKH1Q03407 766 aa9.68□□□□□ -0.86
NUP53YMR153W SAS4Q04003 481 aa9.68□□□□□ -0.86
NUP53YMR153W HAT1Q12341 374 aa9.68□□□□□ -0.86
NUP53YMR153W GRX6Q12438 231 aa9.68□□□□□ -0.86
NUP53YMR153W SIT4P20604 311 aa9.67□□□□□ -0.86
NUP53YMR153W YKU70P32807 602 aa9.67□□□□□ -0.86
NUP53YMR153W PEX21P50091 288 aa9.67□□□□□ -0.86
NUP53YMR153W YDL144CQ07589 356 aa9.67□□□□□ -0.86
NUP53YMR153W HKR1P41809 1802 aa9.66□□□□□ -0.86
NUP53YMR153W FRD1P32614 470 aaKnown RBP9.66□□□□□ -0.86
NUP53YMR153W ATG20Q07528 640 aa9.66□□□□□ -0.86
NUP53YMR153W YOL057WQ08225 711 aa9.66□□□□□ -0.86
Retrieved 100 of 5,963 RNA–protein pairs in 7.2 ms