RNA–Protein interactions for RNA: YML043C

RRN11, Transcript of Component of the core factor (CF) rDNA transcription factor complex, yeastyeast

Gene RRN11, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRN11YML043C RRD1P40454 393 aaKnown RBP5.4□□□□□ -1.54
RRN11YML043C YGR130CP53278 816 aa5.4□□□□□ -1.54
RRN11YML043C SEC3P33332 1336 aaKnown RBP5.4□□□□□ -1.55
RRN11YML043C SSA2P10592 639 aaKnown RBP5.38□□□□□ -1.55
RRN11YML043C YJR115WP47152 169 aa5.38□□□□□ -1.55
RRN11YML043C FPR3P38911 411 aaKnown RBP5.38□□□□□ -1.55
RRN11YML043C KXD1P53158 218 aa5.38□□□□□ -1.55
RRN11YML043C PKC1P24583 1151 aa5.37□□□□□ -1.55
RRN11YML043C PSH1Q12161 406 aa5.37□□□□□ -1.55
RRN11YML043C SSA1P10591 642 aaKnown RBP5.36□□□□□ -1.55
RRN11YML043C HXT10P43581 546 aa5.36□□□□□ -1.55
RRN11YML043C CSN12P47130 423 aa5.36□□□□□ -1.55
RRN11YML043C TEA1P47988 759 aa5.36□□□□□ -1.55
RRN11YML043C MSB3P48566 633 aaPredicted RBP5.36□□□□□ -1.55
RRN11YML043C IME2P32581 645 aa5.35□□□□□ -1.55
RRN11YML043C NIS1P53939 407 aa5.35□□□□□ -1.55
RRN11YML043C YML020WQ03722 664 aa5.35□□□□□ -1.55
RRN11YML043C STH1P32597 1359 aa5.35□□□□□ -1.55
RRN11YML043C PDC1P06169 563 aaKnown RBP5.34□□□□□ -1.55
RRN11YML043C GEF1P37020 779 aa5.34□□□□□ -1.55
RRN11YML043C SYH1Q02875 849 aaKnown RBP5.34□□□□□ -1.55
RRN11YML043C SUB2Q07478 446 aaKnown RBP5.34□□□□□ -1.55
RRN11YML043C BIM1P40013 344 aa5.33□□□□□ -1.56
RRN11YML043C CAF120P53836 1060 aa5.33□□□□□ -1.56
RRN11YML043C FPR4Q06205 392 aaPredicted RBP5.33□□□□□ -1.56
RRN11YML043C SPT2P06843 333 aaPredicted RBP5.33□□□□□ -1.56
RRN11YML043C ACO2P39533 789 aa5.33□□□□□ -1.56
RRN11YML043C YJL007CP47080 104 aa5.33□□□□□ -1.56
RRN11YML043C GLN1P32288 370 aaKnown RBP5.32□□□□□ -1.56
RRN11YML043C NOP8Q08287 484 aaPredicted RBP5.32□□□□□ -1.56
RRN11YML043C PLP2Q12017 286 aa5.32□□□□□ -1.56
RRN11YML043C HSP82P02829 709 aaKnown RBP5.31□□□□□ -1.56
RRN11YML043C RNA1P11745 407 aaKnown RBP5.31□□□□□ -1.56
RRN11YML043C RIX1P38883 763 aaPredicted RBP5.31□□□□□ -1.56
RRN11YML043C ATG32P40458 529 aa5.31□□□□□ -1.56
RRN11YML043C INO80P53115 1489 aa5.3□□□□□ -1.56
RRN11YML043C YTA7P40340 1379 aa5.3□□□□□ -1.56
RRN11YML043C TRK2P28584 889 aa5.3□□□□□ -1.56
RRN11YML043C SLX8P40072 274 aa5.3□□□□□ -1.56
RRN11YML043C SLY41P22215 453 aa5.29□□□□□ -1.56
RRN11YML043C FPK1P53739 893 aa5.29□□□□□ -1.56
RRN11YML043C SSA4P22202 642 aaKnown RBP5.28□□□□□ -1.56
RRN11YML043C KTR1P27810 393 aaKnown RBP5.28□□□□□ -1.56
RRN11YML043C SPC110P32380 944 aa5.28□□□□□ -1.56
RRN11YML043C RPL34BP40525 121 aaKnown RBP5.28□□□□□ -1.56
RRN11YML043C PTK2P47116 818 aaKnown RBP5.28□□□□□ -1.56
RRN11YML043C RPA14P50106 137 aa5.28□□□□□ -1.56
RRN11YML043C UGA3P26370 528 aa5.28□□□□□ -1.56
RRN11YML043C OPT2Q06593 877 aa5.28□□□□□ -1.56
RRN11YML043C YPR097WQ06839 1073 aa5.28□□□□□ -1.56
RRN11YML043C RLP24Q07915 199 aaKnown RBP5.28□□□□□ -1.56
RRN11YML043C MRT4P33201 236 aaKnown RBP5.27□□□□□ -1.57
RRN11YML043C FUN12P39730 1002 aaKnown RBP5.27□□□□□ -1.57
RRN11YML043C PUS6P53294 404 aa5.27□□□□□ -1.57
RRN11YML043C ALR1Q08269 859 aa5.27□□□□□ -1.57
RRN11YML043C TIF1P10081 395 aaKnown RBP5.26□□□□□ -1.57
RRN11YML043C PRS1P32895 427 aaKnown RBP5.26□□□□□ -1.57
RRN11YML043C YBL036CP38197 257 aa5.26□□□□□ -1.57
RRN11YML043C YLR346CQ06139 101 aa5.26□□□□□ -1.57
RRN11YML043C TYW1Q08960 810 aaKnown RBP5.26□□□□□ -1.57
RRN11YML043C UFD4P33202 1483 aa5.25□□□□□ -1.57
RRN11YML043C RTT106P40161 455 aa5.25□□□□□ -1.57
RRN11YML043C SNU71P53207 620 aaKnown RBP5.25□□□□□ -1.57
RRN11YML043C YMR196WQ04336 1088 aa5.25□□□□□ -1.57
RRN11YML043C YDL206WQ12424 762 aa5.25□□□□□ -1.57
RRN11YML043C KIP2P28743 706 aa5.24□□□□□ -1.57
RRN11YML043C IXR1P33417 597 aa5.24□□□□□ -1.57
RRN11YML043C GLY1P37303 387 aaKnown RBP5.24□□□□□ -1.57
RRN11YML043C OPY1P38271 328 aa5.24□□□□□ -1.57
RRN11YML043C NMD2P38798 1089 aaKnown RBP5.24□□□□□ -1.57
RRN11YML043C YGR035CP53222 116 aa5.24□□□□□ -1.57
RRN11YML043C SRF1Q12516 437 aa5.24□□□□□ -1.57
RRN11YML043C BUB1P41695 1021 aaKnown RBP RIP-Chip data5.23□□□□□ -1.57not detected
RRN11YML043C NUP85P46673 744 aa5.23□□□□□ -1.57
RRN11YML043C VPS4P52917 437 aa5.23□□□□□ -1.57
RRN11YML043C YNL011CP53980 444 aa5.23□□□□□ -1.57
RRN11YML043C TBF1Q02457 562 aa5.23□□□□□ -1.57
RRN11YML043C ECM5Q03214 1411 aa5.23□□□□□ -1.57
RRN11YML043C MON2P48563 1636 aaPredicted RBP5.23□□□□□ -1.57
RRN11YML043C CPS1P27614 576 aa5.23□□□□□ -1.57
RRN11YML043C BIO2P32451 375 aa5.23□□□□□ -1.57
RRN11YML043C PIL1P53252 339 aaKnown RBP5.23□□□□□ -1.57
RRN11YML043C HST2P53686 357 aa5.23□□□□□ -1.57
RRN11YML043C YPR204WQ08995 1032 aa5.23□□□□□ -1.57
RRN11YML043C CHD1P32657 1468 aa5.23□□□□□ -1.57
RRN11YML043C MMS22Q06164 1454 aa5.22□□□□□ -1.57
RRN11YML043C TRM1P15565 570 aaKnown RBP5.22□□□□□ -1.57
RRN11YML043C TTI1P36097 1038 aa5.22□□□□□ -1.57
RRN11YML043C EAF7P53911 425 aaKnown RBP5.22□□□□□ -1.57
RRN11YML043C HPF1Q05164 967 aa5.21□□□□□ -1.58
RRN11YML043C SCJ1P25303 377 aa5.2□□□□□ -1.58
RRN11YML043C RTG2P32608 588 aaKnown RBP5.2□□□□□ -1.58
RRN11YML043C CSE4P36012 229 aa5.2□□□□□ -1.58
RRN11YML043C MDG1P53885 366 aa5.2□□□□□ -1.58
RRN11YML043C PKH3Q03306 898 aaPredicted RBP5.2□□□□□ -1.58
RRN11YML043C RAD59Q12223 238 aa5.2□□□□□ -1.58
RRN11YML043C YIR007WP40566 764 aa5.19□□□□□ -1.58
RRN11YML043C RPL34AP87262 121 aaPredicted RBP5.19□□□□□ -1.58
RRN11YML043C GRX3Q03835 250 aa5.19□□□□□ -1.58
RRN11YML043C TY1A-BLQ12266 440 aa5.19□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 9.8 ms