RNA–Protein interactions for RNA: YLR247C

IRC20, Transcript of E3 ubiquitin ligase and putative helicase, yeastyeast

Gene IRC20, Length 4,671 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IRC20YLR247C YML133CQ03099 1374 aa2.6□□□□□ -1.99
IRC20YLR247C YLL067CQ07888 1374 aa2.6□□□□□ -1.99
IRC20YLR247C MRX12P47084 519 aa2.6□□□□□ -1.99
IRC20YLR247C FPK1P53739 893 aa2.6□□□□□ -1.99
IRC20YLR247C WSC3Q12215 556 aa2.6□□□□□ -1.99
IRC20YLR247C CTT1P06115 562 aa2.59□□□□□ -1.99
IRC20YLR247C RAD4P14736 754 aa2.59□□□□□ -1.99
IRC20YLR247C MSB3P48566 633 aaPredicted RBP2.59□□□□□ -1.99
IRC20YLR247C YAP5P40574 245 aa2.59□□□□□ -2
IRC20YLR247C MAC1P35192 417 aa2.58□□□□□ -2
IRC20YLR247C SSP1P38871 571 aa2.58□□□□□ -2
IRC20YLR247C ALD3P54114 506 aa2.58□□□□□ -2
IRC20YLR247C SSM4P40318 1319 aa2.58□□□□□ -2
IRC20YLR247C PRP45P28004 379 aaPredicted RBP2.57□□□□□ -2
IRC20YLR247C TCB1Q12466 1186 aa2.57□□□□□ -2
IRC20YLR247C PRP40P33203 583 aaKnown RBP2.57□□□□□ -2
IRC20YLR247C YKL222CP35995 705 aa2.57□□□□□ -2
IRC20YLR247C YJL171CP46992 396 aa2.57□□□□□ -2
IRC20YLR247C CAB1Q04430 367 aa2.57□□□□□ -2
IRC20YLR247C RPO41P13433 1351 aaKnown RBP2.56□□□□□ -2
IRC20YLR247C EAF6P47128 113 aa2.56□□□□□ -2
IRC20YLR247C SPP1Q03012 353 aa2.56□□□□□ -2
IRC20YLR247C PPH3P32345 308 aa2.56□□□□□ -2
IRC20YLR247C COBP00163 385 aa2.55□□□□□ -2
IRC20YLR247C LAM6Q08001 693 aa2.55□□□□□ -2
IRC20YLR247C PIB1Q06651 286 aa2.55□□□□□ -2
IRC20YLR247C UBR2Q07963 1872 aa2.55□□□□□ -2
IRC20YLR247C MRM1P25270 412 aa2.55□□□□□ -2
IRC20YLR247C NYV1Q12255 253 aa2.55□□□□□ -2
IRC20YLR247C YRF1-4O13559 1382 aa2.54□□□□□ -2
IRC20YLR247C SDH2P21801 266 aa2.53□□□□□ -2
IRC20YLR247C YBL029C-AQ3E756 94 aa2.53□□□□□ -2
IRC20YLR247C YLR271WQ06152 274 aa2.53□□□□□ -2
IRC20YLR247C SAS10Q12136 610 aaPredicted RBP2.53□□□□□ -2
IRC20YLR247C YER156CP40093 338 aaKnown RBP2.53□□□□□ -2.01
IRC20YLR247C TFG1P41895 735 aaPredicted RBP2.53□□□□□ -2.01
IRC20YLR247C MOT2P34909 587 aaKnown RBP2.52□□□□□ -2.01
IRC20YLR247C BUG1Q12191 341 aa2.52□□□□□ -2.01
IRC20YLR247C PFF1P38244 976 aa2.52□□□□□ -2.01
IRC20YLR247C MSB4Q12317 492 aa2.52□□□□□ -2.01
IRC20YLR247C YKL133CP36066 463 aa2.52□□□□□ -2.01
IRC20YLR247C SAP155P43612 1002 aa2.52□□□□□ -2.01
IRC20YLR247C MOT1P32333 1867 aa2.52□□□□□ -2.01
IRC20YLR247C SHC1P39000 512 aa2.51□□□□□ -2.01
IRC20YLR247C GRE2Q12068 342 aaKnown RBP2.51□□□□□ -2.01
IRC20YLR247C HVG1P0CE11 249 aa2.51□□□□□ -2.01
IRC20YLR247C NCS6P53088 359 aa2.51□□□□□ -2.01
IRC20YLR247C PSH1Q12161 406 aa2.51□□□□□ -2.01
IRC20YLR247C MTR4P47047 1073 aaKnown RBP2.51□□□□□ -2.01
IRC20YLR247C ATG20Q07528 640 aa2.51□□□□□ -2.01
IRC20YLR247C ERO1Q03103 563 aa2.51□□□□□ -2.01
IRC20YLR247C ASF1P32447 279 aa2.5□□□□□ -2.01
IRC20YLR247C RTG2P32608 588 aaKnown RBP2.5□□□□□ -2.01
IRC20YLR247C MGA2P40578 1113 aa2.5□□□□□ -2.01
IRC20YLR247C AUS1Q08409 1394 aa2.5□□□□□ -2.01
IRC20YLR247C GRX1P25373 110 aaKnown RBP2.5□□□□□ -2.01
IRC20YLR247C YIL089WP40500 205 aa2.5□□□□□ -2.01
IRC20YLR247C GLC3P32775 704 aa2.5□□□□□ -2.01
IRC20YLR247C TOM1Q03280 3268 aa2.49□□□□□ -2.01
IRC20YLR247C DLD1P32891 587 aa2.49□□□□□ -2.01
IRC20YLR247C FLO1P32768 1537 aa2.49□□□□□ -2.01
IRC20YLR247C SSK22P25390 1331 aaPredicted RBP2.49□□□□□ -2.01
IRC20YLR247C NST1P53935 1240 aa2.49□□□□□ -2.01
IRC20YLR247C MEC3Q02574 474 aa2.49□□□□□ -2.01
IRC20YLR247C RET1P22276 1149 aaKnown RBP2.49□□□□□ -2.01
IRC20YLR247C TAF5P38129 798 aa2.49□□□□□ -2.01
IRC20YLR247C RTG3P38165 486 aa2.49□□□□□ -2.01
IRC20YLR247C XKS1P42826 600 aa2.49□□□□□ -2.01
IRC20YLR247C ULI1P43604 169 aa2.49□□□□□ -2.01
IRC20YLR247C MSN5P52918 1224 aa2.49□□□□□ -2.01
IRC20YLR247C ADE16P54113 591 aaKnown RBP2.49□□□□□ -2.01
IRC20YLR247C ECM29P38737 1868 aa2.49□□□□□ -2.01
IRC20YLR247C YJL181WP46987 611 aa2.48□□□□□ -2.01
IRC20YLR247C TIF11P38912 153 aaKnown RBP2.48□□□□□ -2.01
IRC20YLR247C RCM1P53972 490 aa2.48□□□□□ -2.01
IRC20YLR247C EAP1P36041 632 aaKnown RBP2.48□□□□□ -2.01
IRC20YLR247C MAL31P38156 614 aa2.48□□□□□ -2.01
IRC20YLR247C VNX1P42839 908 aa2.48□□□□□ -2.01
IRC20YLR247C LEU3P08638 886 aa2.47□□□□□ -2.01
IRC20YLR247C SET4P42948 560 aa2.47□□□□□ -2.01
IRC20YLR247C TIF6Q12522 245 aaKnown RBP2.47□□□□□ -2.01
IRC20YLR247C DBP1P24784 617 aaKnown RBP2.47□□□□□ -2.01
IRC20YLR247C ESL2P36168 1195 aa2.47□□□□□ -2.01
IRC20YLR247C YMR1P47147 688 aaKnown RBP RIP-Chip data2.47□□□□□ -2.01not detected
IRC20YLR247C YVH1Q02256 364 aaKnown RBP2.47□□□□□ -2.01
IRC20YLR247C NSR1P27476 414 aaKnown RBP RIP-Chip data2.47□□□□□ -2.01not detected
IRC20YLR247C PSD2P53037 1138 aaKnown RBP2.46□□□□□ -2.02
IRC20YLR247C CST9Q06032 482 aa2.46□□□□□ -2.02
IRC20YLR247C INP54Q08227 384 aaKnown RBP2.46□□□□□ -2.02
IRC20YLR247C RIF1P29539 1916 aa2.46□□□□□ -2.02
IRC20YLR247C SIT4P20604 311 aa2.46□□□□□ -2.02
IRC20YLR247C SEC3P33332 1336 aaKnown RBP2.46□□□□□ -2.02
IRC20YLR247C NAP1P25293 417 aaKnown RBP2.46□□□□□ -2.02
IRC20YLR247C RCR1P38212 213 aa2.46□□□□□ -2.02
IRC20YLR247C FKS1P38631 1876 aaKnown RBP2.46□□□□□ -2.02
IRC20YLR247C AIM21P40563 679 aa2.45□□□□□ -2.02
IRC20YLR247C EAR1Q03212 550 aa2.45□□□□□ -2.02
IRC20YLR247C LEU2P04173 364 aaPredicted RBP2.44□□□□□ -2.02
IRC20YLR247C MST1P07236 462 aa2.44□□□□□ -2.02
IRC20YLR247C UBP16Q02863 499 aa2.44□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms