RNA–Protein interactions for RNA: YLR211C

ATG38, Transcript of Homodimeric subunit of autophagy-specific PtdIns-3-kinase complex I, yeastyeast

Gene ATG38, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG38YLR211C MSB3P48566 633 aaPredicted RBP7.23□□□□□ -1.25
ATG38YLR211C GCR2Q01722 534 aa7.23□□□□□ -1.25
ATG38YLR211C CSE4P36012 229 aa7.22□□□□□ -1.25
ATG38YLR211C BRL1P38770 471 aa7.22□□□□□ -1.25
ATG38YLR211C APP1P53933 587 aa7.22□□□□□ -1.25
ATG38YLR211C YBL036CP38197 257 aa7.21□□□□□ -1.26
ATG38YLR211C EMW1P42842 904 aaKnown RBP7.21□□□□□ -1.26
ATG38YLR211C BIO2P32451 375 aa7.2□□□□□ -1.26
ATG38YLR211C YBL086CP38177 466 aa7.2□□□□□ -1.26
ATG38YLR211C NAF1P53919 492 aaKnown RBP7.2□□□□□ -1.26
ATG38YLR211C YDJ1P25491 409 aaKnown RBP7.19□□□□□ -1.26
ATG38YLR211C MET22P32179 357 aa7.19□□□□□ -1.26
ATG38YLR211C UGA3P26370 528 aa7.17□□□□□ -1.26
ATG38YLR211C GUT2P32191 649 aa7.16□□□□□ -1.26
ATG38YLR211C PTK2P47116 818 aaKnown RBP7.16□□□□□ -1.26
ATG38YLR211C FRA1Q07825 749 aa7.16□□□□□ -1.26
ATG38YLR211C ISF1P32488 338 aa7.15□□□□□ -1.26
ATG38YLR211C ENV9Q08651 330 aa7.15□□□□□ -1.26
ATG38YLR211C SPT5P27692 1063 aaKnown RBP7.14□□□□□ -1.27
ATG38YLR211C MCM16Q12262 181 aa7.14□□□□□ -1.27
ATG38YLR211C SUP45P12385 437 aaKnown RBP7.13□□□□□ -1.27
ATG38YLR211C STE20Q03497 939 aaKnown RBP7.13□□□□□ -1.27
ATG38YLR211C EMP47P43555 445 aa7.12□□□□□ -1.27
ATG38YLR211C YNL108CP53929 270 aa7.12□□□□□ -1.27
ATG38YLR211C MKS1P34072 584 aa7.11□□□□□ -1.27
ATG38YLR211C RTT106P40161 455 aa7.11□□□□□ -1.27
ATG38YLR211C APL6P46682 809 aa7.11□□□□□ -1.27
ATG38YLR211C YJL007CP47080 104 aa7.11□□□□□ -1.27
ATG38YLR211C YDR444WQ04093 687 aa7.11□□□□□ -1.27
ATG38YLR211C DFG5Q05031 458 aa7.11□□□□□ -1.27
ATG38YLR211C ENO2P00925 437 aaKnown RBP7.1□□□□□ -1.27
ATG38YLR211C GAR1P28007 205 aaKnown RBP7.1□□□□□ -1.27
ATG38YLR211C AAD14P42884 376 aa7.1□□□□□ -1.27
ATG38YLR211C LCB5Q06147 687 aaKnown RBP7.1□□□□□ -1.27
ATG38YLR211C FBP26P32604 452 aa7.08□□□□□ -1.28
ATG38YLR211C RGA1P39083 1007 aa7.08□□□□□ -1.28
ATG38YLR211C BIM1P40013 344 aa7.08□□□□□ -1.28
ATG38YLR211C ATG32P40458 529 aa7.08□□□□□ -1.28
ATG38YLR211C ATG20Q07528 640 aa7.08□□□□□ -1.28
ATG38YLR211C STE6P12866 1290 aa7.07□□□□□ -1.28
ATG38YLR211C NUP85P46673 744 aa7.07□□□□□ -1.28
ATG38YLR211C DMA2P53924 522 aa7.07□□□□□ -1.28
ATG38YLR211C OPT2Q06593 877 aa7.07□□□□□ -1.28
ATG38YLR211C SRF1Q12516 437 aa7.07□□□□□ -1.28
ATG38YLR211C ARG82P07250 355 aa7.05□□□□□ -1.28
ATG38YLR211C HAL5P38970 855 aaKnown RBP7.05□□□□□ -1.28
ATG38YLR211C RIM21P48565 533 aa7.05□□□□□ -1.28
ATG38YLR211C ISU1Q03020 165 aa7.05□□□□□ -1.28
ATG38YLR211C YDL176WQ12027 708 aa7.05□□□□□ -1.28
ATG38YLR211C RDS2P19541 446 aaKnown RBP7.04□□□□□ -1.28
ATG38YLR211C DLD1P32891 587 aa7.04□□□□□ -1.28
ATG38YLR211C MRX12P47084 519 aa7.04□□□□□ -1.28
ATG38YLR211C ISR1Q06098 443 aaKnown RBP7.03□□□□□ -1.28
ATG38YLR211C TIF1P10081 395 aaKnown RBP7.02□□□□□ -1.29
ATG38YLR211C YJR098CP47139 656 aa7.02□□□□□ -1.29
ATG38YLR211C YPL062WQ02781 134 aa7.02□□□□□ -1.29
ATG38YLR211C BDS1Q08347 646 aa7.02□□□□□ -1.29
ATG38YLR211C MRX10Q05648 414 aa7.01□□□□□ -1.29
ATG38YLR211C GLY1P37303 387 aaKnown RBP7□□□□□ -1.29
ATG38YLR211C YPP1P46951 817 aa7□□□□□ -1.29
ATG38YLR211C ENO1P00924 437 aaKnown RBP6.99□□□□□ -1.29
ATG38YLR211C SOH1P38633 127 aa6.99□□□□□ -1.29
ATG38YLR211C LSC2P53312 427 aa6.99□□□□□ -1.29
ATG38YLR211C MIP1P15801 1254 aa6.98□□□□□ -1.29
ATG38YLR211C ACO2P39533 789 aa6.98□□□□□ -1.29
ATG38YLR211C HGH1P48362 394 aaKnown RBP6.98□□□□□ -1.29
ATG38YLR211C TY1A-BLQ12266 440 aa6.98□□□□□ -1.29
ATG38YLR211C SPT2P06843 333 aaPredicted RBP6.97□□□□□ -1.29
ATG38YLR211C GBP2P25555 427 aaKnown RBP RIP-Chip data6.97□□□□□ -1.29not detected
ATG38YLR211C UTP13Q05946 817 aaKnown RBP6.97□□□□□ -1.29
ATG38YLR211C YLR346CQ06139 101 aa6.97□□□□□ -1.29
ATG38YLR211C TCB1Q12466 1186 aa6.97□□□□□ -1.29
ATG38YLR211C RTG2P32608 588 aaKnown RBP6.96□□□□□ -1.3
ATG38YLR211C WTM2Q12206 467 aa6.96□□□□□ -1.3
ATG38YLR211C CAF120P53836 1060 aa6.95□□□□□ -1.3
ATG38YLR211C SCW11P53189 542 aa6.94□□□□□ -1.3
ATG38YLR211C HDA3Q06623 655 aa6.94□□□□□ -1.3
ATG38YLR211C UTR2P32623 467 aa6.93□□□□□ -1.3
ATG38YLR211C PEP12P32854 288 aa6.92□□□□□ -1.3
ATG38YLR211C ATG3P40344 310 aa6.92□□□□□ -1.3
ATG38YLR211C RPL34BP40525 121 aaKnown RBP6.92□□□□□ -1.3
ATG38YLR211C YIR007WP40566 764 aa6.92□□□□□ -1.3
ATG38YLR211C UBP2Q01476 1272 aa6.92□□□□□ -1.3
ATG38YLR211C YPR204WQ08995 1032 aa6.92□□□□□ -1.3
ATG38YLR211C SLX8P40072 274 aa6.91□□□□□ -1.3
ATG38YLR211C DAT1P13483 248 aaKnown RBP6.9□□□□□ -1.3
ATG38YLR211C OSH7P38755 437 aa6.9□□□□□ -1.3
ATG38YLR211C CBC2Q08920 208 aaKnown RBP RIP-Chip data6.9□□□□□ -1.3not detected
ATG38YLR211C CDC19P00549 500 aaKnown RBP6.89□□□□□ -1.31
ATG38YLR211C SSN3P39073 555 aa6.89□□□□□ -1.31
ATG38YLR211C DLD3P39976 496 aaKnown RBP6.88□□□□□ -1.31
ATG38YLR211C UTP7P40055 554 aaKnown RBP6.88□□□□□ -1.31
ATG38YLR211C VTC4P47075 721 aa6.88□□□□□ -1.31
ATG38YLR211C NAM8Q00539 523 aaKnown RBP6.88□□□□□ -1.31
ATG38YLR211C CCP1P00431 361 aa6.87□□□□□ -1.31
ATG38YLR211C DAL1P32375 460 aa6.87□□□□□ -1.31
ATG38YLR211C ROG3P43602 733 aa6.87□□□□□ -1.31
ATG38YLR211C TY1A-DR3Q12441 440 aa6.87□□□□□ -1.31
ATG38YLR211C RPP2BP02400 110 aaKnown RBP6.86□□□□□ -1.31
ATG38YLR211C SLA1P32790 1244 aa6.86□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms