RNA–Protein interactions for RNA: YKR017C

HEL1, Transcript of RING finger ubiquitin ligase (E3), yeastyeast

Gene HEL1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HEL1YKR017C HUL5P53119 910 aa7.99□□□□□ -1.13
HEL1YKR017C KDX1P36005 433 aa7.98□□□□□ -1.13
HEL1YKR017C PPX1P38698 397 aa7.98□□□□□ -1.13
HEL1YKR017C PAP2P53632 584 aaKnown RBP7.98□□□□□ -1.13
HEL1YKR017C EAF7P53911 425 aaKnown RBP7.98□□□□□ -1.13
HEL1YKR017C SRP1Q02821 542 aaKnown RBP7.98□□□□□ -1.13
HEL1YKR017C NDL1Q06568 189 aa7.98□□□□□ -1.13
HEL1YKR017C APC2Q12440 853 aa7.98□□□□□ -1.13
HEL1YKR017C ARC19P33204 171 aaKnown RBP7.98□□□□□ -1.13
HEL1YKR017C YKR023WP36119 530 aaKnown RBP7.98□□□□□ -1.13
HEL1YKR017C MET1P36150 593 aa7.98□□□□□ -1.13
HEL1YKR017C PCL8Q08966 492 aa7.98□□□□□ -1.13
HEL1YKR017C SWI6P09959 803 aa7.97□□□□□ -1.13
HEL1YKR017C MPH3P0CE00 602 aa7.97□□□□□ -1.13
HEL1YKR017C SWI3P32591 825 aa7.97□□□□□ -1.13
HEL1YKR017C RRN6P32786 894 aa7.97□□□□□ -1.13
HEL1YKR017C LAM1P38851 1228 aa7.97□□□□□ -1.13
HEL1YKR017C TIM11P81449 96 aaPredicted RBP7.97□□□□□ -1.13
HEL1YKR017C NOP14Q99207 810 aaKnown RBP7.97□□□□□ -1.13
HEL1YKR017C MAK16P10962 306 aaPredicted RBP7.96□□□□□ -1.13
HEL1YKR017C YEF3P16521 1044 aaKnown RBP7.96□□□□□ -1.13
HEL1YKR017C OCA1P50946 238 aaPredicted RBP7.96□□□□□ -1.13
HEL1YKR017C DNM1P54861 757 aa7.96□□□□□ -1.13
HEL1YKR017C RRP9Q06506 573 aaKnown RBP7.96□□□□□ -1.13
HEL1YKR017C NKP1Q12493 238 aa7.96□□□□□ -1.13
HEL1YKR017C CYB2P00175 591 aa7.95□□□□□ -1.14
HEL1YKR017C THR4P16120 514 aaKnown RBP7.95□□□□□ -1.14
HEL1YKR017C KAR3P17119 729 aa7.95□□□□□ -1.14
HEL1YKR017C SLD2P34252 453 aa7.95□□□□□ -1.14
HEL1YKR017C PHM6Q05637 104 aa7.95□□□□□ -1.14
HEL1YKR017C YOL057WQ08225 711 aa7.95□□□□□ -1.14
HEL1YKR017C PSO2P30620 661 aa7.95□□□□□ -1.14
HEL1YKR017C EFB1P32471 206 aaKnown RBP7.95□□□□□ -1.14
HEL1YKR017C KEX1P09620 729 aa7.94□□□□□ -1.14
HEL1YKR017C HST2P53686 357 aa7.94□□□□□ -1.14
HEL1YKR017C MAM3Q12296 706 aa7.94□□□□□ -1.14
HEL1YKR017C TCB1Q12466 1186 aa7.94□□□□□ -1.14
HEL1YKR017C KAR1P11927 433 aa7.93□□□□□ -1.14
HEL1YKR017C KEX2P13134 814 aa7.93□□□□□ -1.14
HEL1YKR017C TSR4P25040 408 aa7.93□□□□□ -1.14
HEL1YKR017C RPL17BP46990 184 aaKnown RBP7.93□□□□□ -1.14
HEL1YKR017C UTP4Q06679 776 aaKnown RBP7.93□□□□□ -1.14
HEL1YKR017C CLP1Q08685 445 aaPredicted RBP7.93□□□□□ -1.14
HEL1YKR017C BRR1Q99177 341 aaPredicted RBP7.92□□□□□ -1.14
HEL1YKR017C KIN1P13185 1064 aa7.92□□□□□ -1.14
HEL1YKR017C SEC23P15303 768 aaKnown RBP7.92□□□□□ -1.14
HEL1YKR017C BDP1P46678 594 aa7.92□□□□□ -1.14
HEL1YKR017C HGH1P48362 394 aaKnown RBP7.92□□□□□ -1.14
HEL1YKR017C REX2P54964 269 aaKnown RBP7.92□□□□□ -1.14
HEL1YKR017C ATG26Q06321 1198 aa7.92□□□□□ -1.14
HEL1YKR017C BMS1Q08965 1183 aaKnown RBP7.92□□□□□ -1.14
HEL1YKR017C RPN12P32496 274 aa7.91□□□□□ -1.14
HEL1YKR017C NPL4P33755 580 aa7.91□□□□□ -1.14
HEL1YKR017C TFC3P34111 1160 aa7.91□□□□□ -1.14
HEL1YKR017C BTN2P53286 410 aa7.91□□□□□ -1.14
HEL1YKR017C DSL1P53847 754 aa7.91□□□□□ -1.14
HEL1YKR017C VPS30Q02948 557 aa7.91□□□□□ -1.14
HEL1YKR017C VTI1Q04338 217 aa7.91□□□□□ -1.14
HEL1YKR017C PUF6Q04373 656 aaKnown RBP7.91□□□□□ -1.14
HEL1YKR017C ORM2Q06144 216 aa7.91□□□□□ -1.14
HEL1YKR017C TRS33Q99394 268 aa7.91□□□□□ -1.14
HEL1YKR017C UGA3P26370 528 aa7.9□□□□□ -1.14
HEL1YKR017C ZUO1P32527 433 aaKnown RBP7.9□□□□□ -1.14
HEL1YKR017C SAS3P34218 831 aa7.9□□□□□ -1.14
HEL1YKR017C UBP12P39538 1254 aa7.9□□□□□ -1.14
HEL1YKR017C LSO1Q3E827 93 aa7.9□□□□□ -1.14
HEL1YKR017C NIP100P33420 868 aa7.89□□□□□ -1.15
HEL1YKR017C ESL2P36168 1195 aa7.89□□□□□ -1.15
HEL1YKR017C EFM2P38347 419 aa7.89□□□□□ -1.15
HEL1YKR017C CST6P40535 587 aa7.89□□□□□ -1.15
HEL1YKR017C DBP10Q12389 995 aaKnown RBP7.89□□□□□ -1.15
HEL1YKR017C RKM4Q12504 494 aa7.89□□□□□ -1.15
HEL1YKR017C SSB1P11484 613 aaKnown RBP7.89□□□□□ -1.15
HEL1YKR017C SPT5P27692 1063 aaKnown RBP7.89□□□□□ -1.15
HEL1YKR017C SSB2P40150 613 aaKnown RBP7.89□□□□□ -1.15
HEL1YKR017C YTA6P40328 754 aa7.89□□□□□ -1.15
HEL1YKR017C BUD27P43573 796 aaKnown RBP RIP-Chip data7.89□□□□□ -1.15not detected
HEL1YKR017C YML119WQ03208 357 aa7.89□□□□□ -1.15
HEL1YKR017C SPO71Q03868 1245 aa7.89□□□□□ -1.15
HEL1YKR017C MRD1Q06106 887 aaKnown RBP7.89□□□□□ -1.15
HEL1YKR017C SUB2Q07478 446 aaKnown RBP7.89□□□□□ -1.15
HEL1YKR017C HMI1Q12039 706 aa7.89□□□□□ -1.15
HEL1YKR017C RTG2P32608 588 aaKnown RBP7.88□□□□□ -1.15
HEL1YKR017C COY1P34237 679 aa7.88□□□□□ -1.15
HEL1YKR017C DSF2P38213 736 aa7.88□□□□□ -1.15
HEL1YKR017C MED8P38304 223 aa7.88□□□□□ -1.15
HEL1YKR017C ETP1P38748 585 aaKnown RBP7.88□□□□□ -1.15
HEL1YKR017C NSE3Q05541 303 aa7.88□□□□□ -1.15
HEL1YKR017C MDM38Q08179 573 aa7.88□□□□□ -1.15
HEL1YKR017C HMG1P12683 1054 aa7.87□□□□□ -1.15
HEL1YKR017C CLB5P30283 435 aa7.87□□□□□ -1.15
HEL1YKR017C EXO84P38261 753 aa7.87□□□□□ -1.15
HEL1YKR017C BEM4P39011 633 aa7.87□□□□□ -1.15
HEL1YKR017C ITC1P53125 1264 aa7.87□□□□□ -1.15
HEL1YKR017C RNH70P53331 553 aa7.87□□□□□ -1.15
HEL1YKR017C PXR1P53335 271 aaPredicted RBP7.87□□□□□ -1.15
HEL1YKR017C HEH2Q03281 663 aa7.87□□□□□ -1.15
HEL1YKR017C SMD2Q06217 110 aaKnown RBP7.87□□□□□ -1.15
HEL1YKR017C PUP2P32379 260 aa7.86□□□□□ -1.15
HEL1YKR017C SNF7P39929 240 aaKnown RBP7.86□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 12 ms