RNA–Protein interactions for RNA: YKL085W

MDH1, Transcript of Mitochondrial malate dehydrogenase, yeastyeast

Gene MDH1, Length 1,005 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDH1YKL085W MEC3Q02574 474 aa9.03□□□□□ -0.96
MDH1YKL085W MSB4Q12317 492 aa9.03□□□□□ -0.96
MDH1YKL085W MLP1Q02455 1875 aaKnown RBP9.01□□□□□ -0.97
MDH1YKL085W DPS1P04802 557 aaKnown RBP9□□□□□ -0.97
MDH1YKL085W GAS4Q08271 471 aa9□□□□□ -0.97
MDH1YKL085W BUG1Q12191 341 aa8.99□□□□□ -0.97
MDH1YKL085W GRE2Q12068 342 aaKnown RBP8.98□□□□□ -0.97
MDH1YKL085W RAD4P14736 754 aa8.97□□□□□ -0.97
MDH1YKL085W SAP155P43612 1002 aa8.96□□□□□ -0.98
MDH1YKL085W UTP22P53254 1237 aaPredicted RBP8.96□□□□□ -0.98
MDH1YKL085W ORC1P54784 914 aaPredicted RBP8.96□□□□□ -0.98
MDH1YKL085W MHP1P43638 1398 aa8.96□□□□□ -0.98
MDH1YKL085W AUS1Q08409 1394 aa8.96□□□□□ -0.98
MDH1YKL085W MSN5P52918 1224 aa8.95□□□□□ -0.98
MDH1YKL085W ATG13Q06628 738 aa8.95□□□□□ -0.98
MDH1YKL085W FKH1P40466 484 aa8.94□□□□□ -0.98
MDH1YKL085W KIN4Q01919 800 aa8.94□□□□□ -0.98
MDH1YKL085W CTT1P06115 562 aa8.92□□□□□ -0.98
MDH1YKL085W PDI1P17967 522 aaKnown RBP8.92□□□□□ -0.98
MDH1YKL085W OSM1P21375 501 aaKnown RBP8.92□□□□□ -0.98
MDH1YKL085W SSA4P22202 642 aaKnown RBP8.92□□□□□ -0.98
MDH1YKL085W GRX1P25373 110 aaKnown RBP8.92□□□□□ -0.98
MDH1YKL085W INP54Q08227 384 aaKnown RBP8.92□□□□□ -0.98
MDH1YKL085W ERT1P38140 529 aa8.91□□□□□ -0.98
MDH1YKL085W YER156CP40093 338 aaKnown RBP8.91□□□□□ -0.98
MDH1YKL085W TGL3P40308 642 aa8.91□□□□□ -0.98
MDH1YKL085W RIX7Q07844 837 aaKnown RBP8.91□□□□□ -0.98
MDH1YKL085W SEC3P33332 1336 aaKnown RBP8.9□□□□□ -0.98
MDH1YKL085W RTF1P53064 558 aa8.9□□□□□ -0.98
MDH1YKL085W HPC2Q01448 625 aa8.9□□□□□ -0.98
MDH1YKL085W YKR023WP36119 530 aaKnown RBP8.89□□□□□ -0.99
MDH1YKL085W TIF4632P39936 914 aaKnown RBP8.89□□□□□ -0.99
MDH1YKL085W SQS1P53866 767 aaKnown RBP8.89□□□□□ -0.99
MDH1YKL085W YKL222CP35995 705 aa8.88□□□□□ -0.99
MDH1YKL085W TUM1Q08686 304 aaKnown RBP8.88□□□□□ -0.99
MDH1YKL085W CWH41P53008 833 aa8.87□□□□□ -0.99
MDH1YKL085W TAP42Q04372 366 aa8.87□□□□□ -0.99
MDH1YKL085W PUS5Q06244 254 aa8.87□□□□□ -0.99
MDH1YKL085W HIM1Q06674 414 aa8.87□□□□□ -0.99
MDH1YKL085W PEX21P50091 288 aa8.86□□□□□ -0.99
MDH1YKL085W UTP10P42945 1769 aaKnown RBP8.86□□□□□ -0.99
MDH1YKL085W GRX4P32642 244 aa8.85□□□□□ -0.99
MDH1YKL085W RTG3P38165 486 aa8.85□□□□□ -0.99
MDH1YKL085W SCT1P32784 759 aa8.84□□□□□ -0.99
MDH1YKL085W YBP2P53169 641 aa8.83□□□□□ -1
MDH1YKL085W NUP145P49687 1317 aa8.82□□□□□ -1
MDH1YKL085W NYV1Q12255 253 aa8.82□□□□□ -1
MDH1YKL085W RRT14P40470 206 aa8.81□□□□□ -1
MDH1YKL085W FPK1P53739 893 aa8.79□□□□□ -1
MDH1YKL085W NST1P53935 1240 aa8.79□□□□□ -1
MDH1YKL085W CTI6Q08923 506 aa8.79□□□□□ -1
MDH1YKL085W PMD1P32634 1753 aa8.78□□□□□ -1
MDH1YKL085W SMY1P32364 656 aaKnown RBP8.77□□□□□ -1.01
MDH1YKL085W PFF1P38244 976 aa8.77□□□□□ -1.01
MDH1YKL085W BUB1P41695 1021 aaKnown RBP RIP-Chip data8.77□□□□□ -1.01not detected
MDH1YKL085W FAS2P19097 1887 aaKnown RBP8.77□□□□□ -1.01
MDH1YKL085W HSP104P31539 908 aaKnown RBP8.76□□□□□ -1.01
MDH1YKL085W DSD1P53095 428 aa8.76□□□□□ -1.01
MDH1YKL085W BUD27P43573 796 aaKnown RBP RIP-Chip data8.74□□□□□ -1.01not detected
MDH1YKL085W TEA1P47988 759 aa8.74□□□□□ -1.01
MDH1YKL085W CTF4Q01454 927 aa8.74□□□□□ -1.01
MDH1YKL085W SLI15P38283 698 aa8.73□□□□□ -1.01
MDH1YKL085W LEO1P38439 464 aa8.73□□□□□ -1.01
MDH1YKL085W SCY1P53009 804 aa8.72□□□□□ -1.01
MDH1YKL085W TOP1P04786 769 aa8.71□□□□□ -1.02
MDH1YKL085W DCD1P06773 312 aa8.71□□□□□ -1.02
MDH1YKL085W SLX5P32828 619 aaKnown RBP8.71□□□□□ -1.02
MDH1YKL085W ERO1Q03103 563 aa8.71□□□□□ -1.02
MDH1YKL085W RMT2Q03305 412 aa8.71□□□□□ -1.02
MDH1YKL085W ATG20Q07528 640 aa8.71□□□□□ -1.02
MDH1YKL085W YLR278CQ05854 1341 aa8.71□□□□□ -1.02
MDH1YKL085W THS1P04801 734 aaKnown RBP8.7□□□□□ -1.02
MDH1YKL085W LPD1P09624 499 aaKnown RBP8.7□□□□□ -1.02
MDH1YKL085W HOP09932 586 aa8.7□□□□□ -1.02
MDH1YKL085W KAR2P16474 682 aaKnown RBP8.7□□□□□ -1.02
MDH1YKL085W RET1P22276 1149 aaKnown RBP8.7□□□□□ -1.02
MDH1YKL085W ICL1P28240 557 aaPredicted RBP8.7□□□□□ -1.02
MDH1YKL085W FIG2P25653 1609 aa8.69□□□□□ -1.02
MDH1YKL085W DUS1P53759 423 aaKnown RBP8.69□□□□□ -1.02
MDH1YKL085W PHM7Q12252 991 aa8.69□□□□□ -1.02
MDH1YKL085W TFC8Q12308 588 aa8.69□□□□□ -1.02
MDH1YKL085W AKL1P38080 1108 aaKnown RBP8.68□□□□□ -1.02
MDH1YKL085W ETP1P38748 585 aaKnown RBP8.68□□□□□ -1.02
MDH1YKL085W SHC1P39000 512 aa8.68□□□□□ -1.02
MDH1YKL085W NOP53Q12080 455 aaKnown RBP8.68□□□□□ -1.02
MDH1YKL085W RPS9BP05755 195 aaKnown RBP8.67□□□□□ -1.02
MDH1YKL085W SER1P33330 395 aaKnown RBP8.67□□□□□ -1.02
MDH1YKL085W POM152P39685 1337 aa8.67□□□□□ -1.02
MDH1YKL085W RAT1Q02792 1006 aaKnown RBP8.67□□□□□ -1.02
MDH1YKL085W CAF20P12962 161 aaKnown RBP8.66□□□□□ -1.02
MDH1YKL085W RTG2P32608 588 aaKnown RBP8.66□□□□□ -1.02
MDH1YKL085W YFR016CP43597 1233 aaKnown RBP8.66□□□□□ -1.02
MDH1YKL085W MDG1P53885 366 aa8.66□□□□□ -1.02
MDH1YKL085W BDF2Q07442 638 aa8.66□□□□□ -1.02
MDH1YKL085W ALE1Q08548 619 aa8.66□□□□□ -1.02
MDH1YKL085W AOS1Q06624 347 aa8.65□□□□□ -1.02
MDH1YKL085W HKR1P41809 1802 aa8.64□□□□□ -1.03
MDH1YKL085W SIT4P20604 311 aa8.64□□□□□ -1.03
MDH1YKL085W KCC4P25389 1037 aa8.64□□□□□ -1.03
MDH1YKL085W YKU70P32807 602 aa8.64□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 24.1 ms