RNA–Protein interactions for RNA: YKL028W

TFA1, Transcript of TFIIE large subunit, yeastyeast

Gene TFA1, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFA1YKL028W YNR021WP53723 404 aaKnown RBP6.5□□□□□ -1.37
TFA1YKL028W BUB1P41695 1021 aaKnown RBP RIP-Chip data6.5□□□□□ -1.37not detected
TFA1YKL028W YLR346CQ06139 101 aa6.5□□□□□ -1.37
TFA1YKL028W NUP85P46673 744 aa6.49□□□□□ -1.37
TFA1YKL028W NOP8Q08287 484 aaPredicted RBP6.49□□□□□ -1.37
TFA1YKL028W YIR007WP40566 764 aa6.48□□□□□ -1.37
TFA1YKL028W IOC4Q04213 475 aa6.48□□□□□ -1.37
TFA1YKL028W RTT106P40161 455 aa6.47□□□□□ -1.37
TFA1YKL028W SCW11P53189 542 aa6.47□□□□□ -1.37
TFA1YKL028W YGR035CP53222 116 aa6.47□□□□□ -1.37
TFA1YKL028W MMP1Q12372 583 aa6.47□□□□□ -1.37
TFA1YKL028W MIP1P15801 1254 aa6.45□□□□□ -1.38
TFA1YKL028W TY1A-BLQ12266 440 aa6.45□□□□□ -1.38
TFA1YKL028W ESS1P22696 170 aa6.44□□□□□ -1.38
TFA1YKL028W VAC17P25591 423 aa6.44□□□□□ -1.38
TFA1YKL028W AIM7Q12156 149 aa6.44□□□□□ -1.38
TFA1YKL028W GLN1P32288 370 aaKnown RBP6.43□□□□□ -1.38
TFA1YKL028W AAD14P42884 376 aa6.43□□□□□ -1.38
TFA1YKL028W YJU3P28321 313 aa6.42□□□□□ -1.38
TFA1YKL028W TRK2P28584 889 aa6.42□□□□□ -1.38
TFA1YKL028W YBL086CP38177 466 aa6.42□□□□□ -1.38
TFA1YKL028W HPF1Q05164 967 aa6.42□□□□□ -1.38
TFA1YKL028W ARG82P07250 355 aa6.41□□□□□ -1.38
TFA1YKL028W GLC3P32775 704 aa6.41□□□□□ -1.38
TFA1YKL028W SLX8P40072 274 aa6.41□□□□□ -1.38
TFA1YKL028W ATF2P53296 535 aa6.4□□□□□ -1.39
TFA1YKL028W LSC2P53312 427 aa6.4□□□□□ -1.39
TFA1YKL028W SSA1P10591 642 aaKnown RBP6.38□□□□□ -1.39
TFA1YKL028W GEF1P37020 779 aa6.38□□□□□ -1.39
TFA1YKL028W GUA1P38625 525 aaKnown RBP6.38□□□□□ -1.39
TFA1YKL028W YJR098CP47139 656 aa6.38□□□□□ -1.39
TFA1YKL028W MTC5Q03897 1148 aa6.38□□□□□ -1.39
TFA1YKL028W DLD1P32891 587 aa6.37□□□□□ -1.39
TFA1YKL028W APP1P53933 587 aa6.37□□□□□ -1.39
TFA1YKL028W ITT1Q04638 464 aa6.37□□□□□ -1.39
TFA1YKL028W RSC30P38781 883 aa6.35□□□□□ -1.39
TFA1YKL028W UBP2Q01476 1272 aa6.35□□□□□ -1.39
TFA1YKL028W EMW1P42842 904 aaKnown RBP6.34□□□□□ -1.39
TFA1YKL028W HPC2Q01448 625 aa6.34□□□□□ -1.39
TFA1YKL028W TCB1Q12466 1186 aa6.34□□□□□ -1.39
TFA1YKL028W PKH3Q03306 898 aaPredicted RBP6.33□□□□□ -1.4
TFA1YKL028W SUB2Q07478 446 aaKnown RBP6.33□□□□□ -1.4
TFA1YKL028W KTR1P27810 393 aaKnown RBP6.33□□□□□ -1.4
TFA1YKL028W ROG3P43602 733 aa6.33□□□□□ -1.4
TFA1YKL028W NOP7P53261 605 aaKnown RBP6.31□□□□□ -1.4
TFA1YKL028W TY1A-MR1Q04215 440 aa6.31□□□□□ -1.4
TFA1YKL028W YPR204WQ08995 1032 aa6.31□□□□□ -1.4
TFA1YKL028W MKS1P34072 584 aa6.29□□□□□ -1.4
TFA1YKL028W FIG4P42837 879 aa6.29□□□□□ -1.4
TFA1YKL028W CCP1P00431 361 aa6.28□□□□□ -1.4
TFA1YKL028W ARG8P18544 423 aa6.28□□□□□ -1.4
TFA1YKL028W TFB3Q03290 321 aa6.28□□□□□ -1.4
TFA1YKL028W DFG5Q05031 458 aa6.28□□□□□ -1.4
TFA1YKL028W OSH7P38755 437 aa6.27□□□□□ -1.41
TFA1YKL028W MRX12P47084 519 aa6.25□□□□□ -1.41
TFA1YKL028W DPH6Q12429 685 aa6.25□□□□□ -1.41
TFA1YKL028W TEC1P18412 486 aa6.24□□□□□ -1.41
TFA1YKL028W SNU71P53207 620 aaKnown RBP6.24□□□□□ -1.41
TFA1YKL028W SLD2P34252 453 aa6.23□□□□□ -1.41
TFA1YKL028W BRL1P38770 471 aa6.23□□□□□ -1.41
TFA1YKL028W JJJ3P47138 172 aa6.23□□□□□ -1.41
TFA1YKL028W FBP26P32604 452 aa6.22□□□□□ -1.41
TFA1YKL028W YPR084WQ06821 456 aa6.22□□□□□ -1.41
TFA1YKL028W PUS1Q12211 544 aaKnown RBP6.22□□□□□ -1.41
TFA1YKL028W RAD59Q12223 238 aa6.22□□□□□ -1.41
TFA1YKL028W CDC19P00549 500 aaKnown RBP6.21□□□□□ -1.42
TFA1YKL028W CSN12P47130 423 aa6.21□□□□□ -1.42
TFA1YKL028W LYS5P50113 272 aa6.21□□□□□ -1.42
TFA1YKL028W BDS1Q08347 646 aa6.21□□□□□ -1.42
TFA1YKL028W SSA4P22202 642 aaKnown RBP6.2□□□□□ -1.42
TFA1YKL028W PKC1P24583 1151 aa6.2□□□□□ -1.42
TFA1YKL028W NAM8Q00539 523 aaKnown RBP6.2□□□□□ -1.42
TFA1YKL028W BIM1P40013 344 aa6.19□□□□□ -1.42
TFA1YKL028W ICP55P40051 511 aa6.19□□□□□ -1.42
TFA1YKL028W PHM7Q12252 991 aa6.18□□□□□ -1.42
TFA1YKL028W STE6P12866 1290 aa6.17□□□□□ -1.42
TFA1YKL028W PAM1P37304 830 aaKnown RBP6.16□□□□□ -1.42
TFA1YKL028W VTC4P47075 721 aa6.16□□□□□ -1.42
TFA1YKL028W SSA2P10592 639 aaKnown RBP6.16□□□□□ -1.42
TFA1YKL028W MET10P39692 1035 aa6.16□□□□□ -1.42
TFA1YKL028W LSB3P43603 459 aaKnown RBP6.16□□□□□ -1.42
TFA1YKL028W YJL007CP47080 104 aa6.16□□□□□ -1.42
TFA1YKL028W ATG32P40458 529 aa6.15□□□□□ -1.43
TFA1YKL028W MDJ1P35191 511 aa6.14□□□□□ -1.43
TFA1YKL028W NSG2P53898 299 aa6.14□□□□□ -1.43
TFA1YKL028W MAK16P10962 306 aaPredicted RBP6.13□□□□□ -1.43
TFA1YKL028W GUT2P32191 649 aa6.13□□□□□ -1.43
TFA1YKL028W CDC3P32457 520 aaKnown RBP6.12□□□□□ -1.43
TFA1YKL028W CUZ1P53899 274 aa6.12□□□□□ -1.43
TFA1YKL028W RPL34AP87262 121 aaPredicted RBP6.12□□□□□ -1.43
TFA1YKL028W ISU1Q03020 165 aa6.12□□□□□ -1.43
TFA1YKL028W TOP1P04786 769 aa6.11□□□□□ -1.43
TFA1YKL028W HEM3P28789 327 aa6.11□□□□□ -1.43
TFA1YKL028W RRN6P32786 894 aa6.11□□□□□ -1.43
TFA1YKL028W SSF1P38789 453 aaPredicted RBP6.11□□□□□ -1.43
TFA1YKL028W ATG20Q07528 640 aa6.11□□□□□ -1.43
TFA1YKL028W SEN54Q02825 467 aaPredicted RBP6.1□□□□□ -1.43
TFA1YKL028W TIF1P10081 395 aaKnown RBP6.09□□□□□ -1.43
TFA1YKL028W DLD3P39976 496 aaKnown RBP6.09□□□□□ -1.43
TFA1YKL028W RPL34BP40525 121 aaKnown RBP6.09□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 27.5 ms