RNA–Protein interactions for RNA: YIL076W

SEC28, Transcript of Epsilon-COP subunit of the coatomer, yeastyeast

Gene SEC28, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC28YIL076W MRT4P33201 236 aaKnown RBP8.62□□□□□ -1.03
SEC28YIL076W NAF1P53919 492 aaKnown RBP8.61□□□□□ -1.03
SEC28YIL076W YPR084WQ06821 456 aa8.6□□□□□ -1.03
SEC28YIL076W MSB3P48566 633 aaPredicted RBP8.59□□□□□ -1.03
SEC28YIL076W APP1P53933 587 aa8.59□□□□□ -1.03
SEC28YIL076W UGA3P26370 528 aa8.58□□□□□ -1.04
SEC28YIL076W BIO2P32451 375 aa8.58□□□□□ -1.04
SEC28YIL076W YJR115WP47152 169 aa8.58□□□□□ -1.04
SEC28YIL076W SPT5P27692 1063 aaKnown RBP8.56□□□□□ -1.04
SEC28YIL076W GUT2P32191 649 aa8.56□□□□□ -1.04
SEC28YIL076W EMW1P42842 904 aaKnown RBP8.56□□□□□ -1.04
SEC28YIL076W YDJ1P25491 409 aaKnown RBP8.54□□□□□ -1.04
SEC28YIL076W YBL086CP38177 466 aa8.54□□□□□ -1.04
SEC28YIL076W HGH1P48362 394 aaKnown RBP8.52□□□□□ -1.05
SEC28YIL076W STE20Q03497 939 aaKnown RBP8.52□□□□□ -1.05
SEC28YIL076W FRA1Q07825 749 aa8.52□□□□□ -1.05
SEC28YIL076W MCM16Q12262 181 aa8.52□□□□□ -1.05
SEC28YIL076W ISF1P32488 338 aa8.51□□□□□ -1.05
SEC28YIL076W YJL007CP47080 104 aa8.51□□□□□ -1.05
SEC28YIL076W PTK2P47116 818 aaKnown RBP8.51□□□□□ -1.05
SEC28YIL076W RTT106P40161 455 aa8.5□□□□□ -1.05
SEC28YIL076W YNL108CP53929 270 aa8.5□□□□□ -1.05
SEC28YIL076W SRF1Q12516 437 aa8.5□□□□□ -1.05
SEC28YIL076W MET22P32179 357 aa8.49□□□□□ -1.05
SEC28YIL076W MKS1P34072 584 aa8.49□□□□□ -1.05
SEC28YIL076W EMP47P43555 445 aa8.49□□□□□ -1.05
SEC28YIL076W ENV9Q08651 330 aa8.47□□□□□ -1.05
SEC28YIL076W SUP45P12385 437 aaKnown RBP8.46□□□□□ -1.06
SEC28YIL076W GAR1P28007 205 aaKnown RBP8.46□□□□□ -1.06
SEC28YIL076W DMA2P53924 522 aa8.46□□□□□ -1.06
SEC28YIL076W YDR444WQ04093 687 aa8.46□□□□□ -1.06
SEC28YIL076W DFG5Q05031 458 aa8.46□□□□□ -1.06
SEC28YIL076W ENO2P00925 437 aaKnown RBP8.45□□□□□ -1.06
SEC28YIL076W BIM1P40013 344 aa8.45□□□□□ -1.06
SEC28YIL076W FBP26P32604 452 aa8.44□□□□□ -1.06
SEC28YIL076W MRX12P47084 519 aa8.44□□□□□ -1.06
SEC28YIL076W ATG20Q07528 640 aa8.44□□□□□ -1.06
SEC28YIL076W ARG82P07250 355 aa8.43□□□□□ -1.06
SEC28YIL076W ATG32P40458 529 aa8.43□□□□□ -1.06
SEC28YIL076W AAD14P42884 376 aa8.43□□□□□ -1.06
SEC28YIL076W LCB5Q06147 687 aaKnown RBP8.43□□□□□ -1.06
SEC28YIL076W YPP1P46951 817 aa8.42□□□□□ -1.06
SEC28YIL076W NUP85P46673 744 aa8.41□□□□□ -1.06
SEC28YIL076W APL6P46682 809 aa8.41□□□□□ -1.06
SEC28YIL076W BDS1Q08347 646 aa8.4□□□□□ -1.06
SEC28YIL076W TIF1P10081 395 aaKnown RBP8.39□□□□□ -1.07
SEC28YIL076W RIM21P48565 533 aa8.39□□□□□ -1.07
SEC28YIL076W ISU1Q03020 165 aa8.39□□□□□ -1.07
SEC28YIL076W ISR1Q06098 443 aaKnown RBP8.39□□□□□ -1.07
SEC28YIL076W OPT2Q06593 877 aa8.39□□□□□ -1.07
SEC28YIL076W STE6P12866 1290 aa8.38□□□□□ -1.07
SEC28YIL076W GBP2P25555 427 aaKnown RBP RIP-Chip data8.38□□□□□ -1.07not detected
SEC28YIL076W DLD1P32891 587 aa8.37□□□□□ -1.07
SEC28YIL076W RPL34BP40525 121 aaKnown RBP8.37□□□□□ -1.07
SEC28YIL076W SOH1P38633 127 aa8.35□□□□□ -1.07
SEC28YIL076W HAL5P38970 855 aaKnown RBP8.35□□□□□ -1.07
SEC28YIL076W YLR346CQ06139 101 aa8.35□□□□□ -1.07
SEC28YIL076W RTG2P32608 588 aaKnown RBP8.34□□□□□ -1.07
SEC28YIL076W ATG3P40344 310 aa8.34□□□□□ -1.07
SEC28YIL076W LSC2P53312 427 aa8.34□□□□□ -1.07
SEC28YIL076W ENO1P00924 437 aaKnown RBP8.33□□□□□ -1.08
SEC28YIL076W RDS2P19541 446 aaKnown RBP8.33□□□□□ -1.08
SEC28YIL076W YJR098CP47139 656 aa8.33□□□□□ -1.08
SEC28YIL076W MIP1P15801 1254 aa8.32□□□□□ -1.08
SEC28YIL076W UTP13Q05946 817 aaKnown RBP8.32□□□□□ -1.08
SEC28YIL076W GLY1P37303 387 aaKnown RBP8.31□□□□□ -1.08
SEC28YIL076W MRX10Q05648 414 aa8.31□□□□□ -1.08
SEC28YIL076W YPR204WQ08995 1032 aa8.3□□□□□ -1.08
SEC28YIL076W RPP2BP02400 110 aaKnown RBP8.29□□□□□ -1.08
SEC28YIL076W UTR2P32623 467 aa8.29□□□□□ -1.08
SEC28YIL076W TCB1Q12466 1186 aa8.29□□□□□ -1.08
SEC28YIL076W SPT2P06843 333 aaPredicted RBP8.28□□□□□ -1.08
SEC28YIL076W DLD3P39976 496 aaKnown RBP8.28□□□□□ -1.08
SEC28YIL076W SCW11P53189 542 aa8.28□□□□□ -1.08
SEC28YIL076W YPL062WQ02781 134 aa8.28□□□□□ -1.08
SEC28YIL076W YDL176WQ12027 708 aa8.28□□□□□ -1.08
SEC28YIL076W WTM2Q12206 467 aa8.28□□□□□ -1.08
SEC28YIL076W DAT1P13483 248 aaKnown RBP8.27□□□□□ -1.09
SEC28YIL076W UBP2Q01476 1272 aa8.27□□□□□ -1.09
SEC28YIL076W TY1A-BLQ12266 440 aa8.27□□□□□ -1.09
SEC28YIL076W CAF120P53836 1060 aa8.26□□□□□ -1.09
SEC28YIL076W HDA3Q06623 655 aa8.26□□□□□ -1.09
SEC28YIL076W RGA1P39083 1007 aa8.25□□□□□ -1.09
SEC28YIL076W TBS1P38114 1094 aa8.23□□□□□ -1.09
SEC28YIL076W ACO2P39533 789 aa8.23□□□□□ -1.09
SEC28YIL076W CBC2Q08920 208 aaKnown RBP RIP-Chip data8.23□□□□□ -1.09not detected
SEC28YIL076W SLX8P40072 274 aa8.21□□□□□ -1.1
SEC28YIL076W PEP12P32854 288 aa8.2□□□□□ -1.1
SEC28YIL076W UTP7P40055 554 aaKnown RBP8.2□□□□□ -1.1
SEC28YIL076W YIR007WP40566 764 aa8.2□□□□□ -1.1
SEC28YIL076W VTC4P47075 721 aa8.19□□□□□ -1.1
SEC28YIL076W OSH7P38755 437 aa8.18□□□□□ -1.1
SEC28YIL076W AIM9P40053 627 aaKnown RBP8.18□□□□□ -1.1
SEC28YIL076W KTR7P40504 517 aa8.17□□□□□ -1.1
SEC28YIL076W DAL1P32375 460 aa8.16□□□□□ -1.1
SEC28YIL076W SSN3P39073 555 aa8.16□□□□□ -1.1
SEC28YIL076W ROG3P43602 733 aa8.16□□□□□ -1.1
SEC28YIL076W SUM1P46676 1062 aa8.16□□□□□ -1.1
SEC28YIL076W CDC19P00549 500 aaKnown RBP8.15□□□□□ -1.1
SEC28YIL076W SIS2P36024 562 aa8.15□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms