RNA–Protein interactions for RNA: YHR056C

RSC30, Transcript of Component of the RSC chromatin remodeling complex, yeast

Gene RSC30, Length 2,652 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSC30	YHR056C	RCR1	P38212	213 aa		7.8	□□□□□ -1.16
RSC30	YHR056C	ADE16	P54113	591 aa	Known RBP	7.8	□□□□□ -1.16
RSC30	YHR056C	KIN4	Q01919	800 aa		7.79	□□□□□ -1.16
RSC30	YHR056C	DUS1	P53759	423 aa	Known RBP	7.78	□□□□□ -1.16
RSC30	YHR056C	RTF1	P53064	558 aa		7.77	□□□□□ -1.16
RSC30	YHR056C	PFF1	P38244	976 aa		7.76	□□□□□ -1.17
RSC30	YHR056C	NST1	P53935	1240 aa		7.75	□□□□□ -1.17
RSC30	YHR056C	CWH41	P53008	833 aa		7.75	□□□□□ -1.17
RSC30	YHR056C	KIP3	P53086	805 aa	Known RBP	7.75	□□□□□ -1.17
RSC30	YHR056C	ETP1	P38748	585 aa	Known RBP	7.74	□□□□□ -1.17
RSC30	YHR056C	SEC3	P33332	1336 aa	Known RBP	7.73	□□□□□ -1.17
RSC30	YHR056C	PDI1	P17967	522 aa	Known RBP	7.73	□□□□□ -1.17
RSC30	YHR056C	DPS1	P04802	557 aa	Known RBP	7.72	□□□□□ -1.17
RSC30	YHR056C	GRX4	P32642	244 aa		7.72	□□□□□ -1.17
RSC30	YHR056C	YML133C	Q03099	1374 aa		7.72	□□□□□ -1.17
RSC30	YHR056C	YLL067C	Q07888	1374 aa		7.72	□□□□□ -1.17
RSC30	YHR056C	OSM1	P21375	501 aa	Known RBP	7.72	□□□□□ -1.17
RSC30	YHR056C	MDG1	P53885	366 aa		7.72	□□□□□ -1.17
RSC30	YHR056C	SRF1	Q12516	437 aa		7.71	□□□□□ -1.17
RSC30	YHR056C	RET1	P22276	1149 aa	Known RBP	7.71	□□□□□ -1.18
RSC30	YHR056C	RTG2	P32608	588 aa	Known RBP	7.71	□□□□□ -1.18
RSC30	YHR056C	SHC1	P39000	512 aa		7.71	□□□□□ -1.18
RSC30	YHR056C	CTF4	Q01454	927 aa		7.7	□□□□□ -1.18
RSC30	YHR056C	ATG20	Q07528	640 aa		7.7	□□□□□ -1.18
RSC30	YHR056C	SLI15	P38283	698 aa		7.7	□□□□□ -1.18
RSC30	YHR056C	INP54	Q08227	384 aa	Known RBP	7.7	□□□□□ -1.18
RSC30	YHR056C	ERO1	Q03103	563 aa		7.69	□□□□□ -1.18
RSC30	YHR056C	TAP42	Q04372	366 aa		7.69	□□□□□ -1.18
RSC30	YHR056C	RIX7	Q07844	837 aa	Known RBP	7.69	□□□□□ -1.18
RSC30	YHR056C	DIB1	Q06819	143 aa	Predicted RBP	7.68	□□□□□ -1.18
RSC30	YHR056C	YBP2	P53169	641 aa		7.68	□□□□□ -1.18
RSC30	YHR056C	TYW1	Q08960	810 aa	Known RBP	7.68	□□□□□ -1.18
RSC30	YHR056C	YLR278C	Q05854	1341 aa		7.68	□□□□□ -1.18
RSC30	YHR056C	SDH2	P21801	266 aa		7.67	□□□□□ -1.18
RSC30	YHR056C	MAC1	P35192	417 aa		7.66	□□□□□ -1.18
RSC30	YHR056C	GRX6	Q12438	231 aa		7.65	□□□□□ -1.18
RSC30	YHR056C	UTP10	P42945	1769 aa	Known RBP	7.65	□□□□□ -1.18
RSC30	YHR056C	GAS4	Q08271	471 aa		7.65	□□□□□ -1.19
RSC30	YHR056C	RAT1	Q02792	1006 aa	Known RBP	7.64	□□□□□ -1.19
RSC30	YHR056C	FKH1	P40466	484 aa		7.64	□□□□□ -1.19
RSC30	YHR056C	THS1	P04801	734 aa	Known RBP	7.63	□□□□□ -1.19
RSC30	YHR056C	TIF6	Q12522	245 aa	Known RBP	7.63	□□□□□ -1.19
RSC30	YHR056C	FIG2	P25653	1609 aa		7.62	□□□□□ -1.19
RSC30	YHR056C	SIT4	P20604	311 aa		7.62	□□□□□ -1.19
RSC30	YHR056C	MLP1	Q02455	1875 aa	Known RBP	7.62	□□□□□ -1.19
RSC30	YHR056C	SMY1	P32364	656 aa	Known RBP	7.61	□□□□□ -1.19
RSC30	YHR056C	VHR2	P40041	505 aa		7.61	□□□□□ -1.19
RSC30	YHR056C	NUP145	P49687	1317 aa		7.61	□□□□□ -1.19
RSC30	YHR056C	LPD1	P09624	499 aa	Known RBP	7.61	□□□□□ -1.19
RSC30	YHR056C	YKU70	P32807	602 aa		7.6	□□□□□ -1.19
RSC30	YHR056C	PHM7	Q12252	991 aa		7.6	□□□□□ -1.19
RSC30	YHR056C	YIL089W	P40500	205 aa		7.6	□□□□□ -1.19
RSC30	YHR056C	AUS1	Q08409	1394 aa		7.6	□□□□□ -1.19
RSC30	YHR056C	RMT2	Q03305	412 aa		7.59	□□□□□ -1.19
RSC30	YHR056C	IRC3	Q06683	689 aa		7.59	□□□□□ -1.19
RSC30	YHR056C	GLC3	P32775	704 aa		7.58	□□□□□ -1.2
RSC30	YHR056C	TOP1	P04786	769 aa		7.57	□□□□□ -1.2
RSC30	YHR056C	BSD2	P38356	321 aa		7.57	□□□□□ -1.2
RSC30	YHR056C	YFR016C	P43597	1233 aa	Known RBP	7.57	□□□□□ -1.2
RSC30	YHR056C	TIM50	Q02776	476 aa		7.57	□□□□□ -1.2
RSC30	YHR056C	MSM1	P22438	575 aa		7.57	□□□□□ -1.2
RSC30	YHR056C	NCS6	P53088	359 aa		7.57	□□□□□ -1.2
RSC30	YHR056C	BDF2	Q07442	638 aa		7.57	□□□□□ -1.2
RSC30	YHR056C	TUM1	Q08686	304 aa	Known RBP	7.56	□□□□□ -1.2
RSC30	YHR056C	ICL1	P28240	557 aa	Predicted RBP	7.56	□□□□□ -1.2
RSC30	YHR056C	TEA1	P47988	759 aa		7.56	□□□□□ -1.2
RSC30	YHR056C	DIP2	Q12220	943 aa	Predicted RBP	7.56	□□□□□ -1.2
RSC30	YHR056C	CTI6	Q08923	506 aa		7.55	□□□□□ -1.2
RSC30	YHR056C	PEA2	P40091	420 aa		7.55	□□□□□ -1.2
RSC30	YHR056C	SSK22	P25390	1331 aa	Predicted RBP	7.54	□□□□□ -1.2
RSC30	YHR056C	NOP53	Q12080	455 aa	Known RBP	7.54	□□□□□ -1.2
RSC30	YHR056C	DSD1	P53095	428 aa		7.53	□□□□□ -1.2
RSC30	YHR056C	YKR023W	P36119	530 aa	Known RBP	7.53	□□□□□ -1.2
RSC30	YHR056C	CWC15	Q03772	175 aa	Known RBP	7.53	□□□□□ -1.2
RSC30	YHR056C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	7.52	□□□□□ -1.21	not detected
RSC30	YHR056C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	7.52	□□□□□ -1.21	not detected
RSC30	YHR056C	SSP2	Q08646	371 aa		7.52	□□□□□ -1.21
RSC30	YHR056C	HVG1	P0CE11	249 aa		7.51	□□□□□ -1.21
RSC30	YHR056C	RSC30	P38781	883 aa		7.51	□□□□□ -1.21
RSC30	YHR056C	CST9	Q06032	482 aa		7.51	□□□□□ -1.21
RSC30	YHR056C	FET4	P40988	552 aa		7.5	□□□□□ -1.21
RSC30	YHR056C	EMP47	P43555	445 aa		7.5	□□□□□ -1.21
RSC30	YHR056C	AOS1	Q06624	347 aa		7.5	□□□□□ -1.21
RSC30	YHR056C	DPL1	Q05567	589 aa		7.49	□□□□□ -1.21
RSC30	YHR056C	FAS2	P19097	1887 aa	Known RBP	7.49	□□□□□ -1.21
RSC30	YHR056C	KCC4	P25389	1037 aa		7.49	□□□□□ -1.21
RSC30	YHR056C	RRT6	P53117	311 aa	Predicted RBP	7.49	□□□□□ -1.21
RSC30	YHR056C	HSP104	P31539	908 aa	Known RBP	7.48	□□□□□ -1.21
RSC30	YHR056C	CRF1	Q04930	467 aa		7.48	□□□□□ -1.21
RSC30	YHR056C	HKR1	P41809	1802 aa		7.48	□□□□□ -1.21
RSC30	YHR056C	SER1	P33330	395 aa	Known RBP	7.48	□□□□□ -1.21
RSC30	YHR056C	SYF1	Q04048	859 aa	Predicted RBP	7.48	□□□□□ -1.21
RSC30	YHR056C	YGR117C	P53270	476 aa		7.47	□□□□□ -1.21
RSC30	YHR056C	UBP16	Q02863	499 aa		7.47	□□□□□ -1.21
RSC30	YHR056C	AIM7	Q12156	149 aa		7.47	□□□□□ -1.21
RSC30	YHR056C	TIF4632	P39936	914 aa	Known RBP	7.46	□□□□□ -1.21
RSC30	YHR056C	UBX2	Q04228	584 aa		7.46	□□□□□ -1.21
RSC30	YHR056C	PIB1	Q06651	286 aa		7.46	□□□□□ -1.21
RSC30	YHR056C	HIM1	Q06674	414 aa		7.46	□□□□□ -1.21
RSC30	YHR056C	PMD1	P32634	1753 aa		7.46	□□□□□ -1.22

Retrieved 100 of 5,963 RNA–protein pairs in 13 ms