RNA–Protein interactions for RNA: YGR253C

PUP2, Transcript of Alpha 5 subunit of the 20S proteasome, yeastyeast

Gene PUP2, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP2YGR253C MSN5P52918 1224 aa9.85□□□□□ -0.83
PUP2YGR253C UTP22P53254 1237 aaPredicted RBP9.84□□□□□ -0.83
PUP2YGR253C HPC2Q01448 625 aa9.84□□□□□ -0.83
PUP2YGR253C MLP1Q02455 1875 aaKnown RBP9.83□□□□□ -0.84
PUP2YGR253C GRX1P25373 110 aaKnown RBP9.83□□□□□ -0.84
PUP2YGR253C OSM1P21375 501 aaKnown RBP9.82□□□□□ -0.84
PUP2YGR253C RTG3P38165 486 aa9.82□□□□□ -0.84
PUP2YGR253C SEC3P33332 1336 aaKnown RBP9.82□□□□□ -0.84
PUP2YGR253C AUS1Q08409 1394 aa9.81□□□□□ -0.84
PUP2YGR253C CTT1P06115 562 aa9.81□□□□□ -0.84
PUP2YGR253C GRX4P32642 244 aa9.8□□□□□ -0.84
PUP2YGR253C INP54Q08227 384 aaKnown RBP9.8□□□□□ -0.84
PUP2YGR253C YER156CP40093 338 aaKnown RBP9.79□□□□□ -0.84
PUP2YGR253C TAP42Q04372 366 aa9.79□□□□□ -0.84
PUP2YGR253C HIM1Q06674 414 aa9.79□□□□□ -0.84
PUP2YGR253C MHP1P43638 1398 aa9.77□□□□□ -0.84
PUP2YGR253C RRT14P40470 206 aa9.77□□□□□ -0.85
PUP2YGR253C YBP2P53169 641 aa9.77□□□□□ -0.85
PUP2YGR253C SQS1P53866 767 aaKnown RBP9.77□□□□□ -0.85
PUP2YGR253C RIX7Q07844 837 aaKnown RBP9.77□□□□□ -0.85
PUP2YGR253C KIN4Q01919 800 aa9.76□□□□□ -0.85
PUP2YGR253C YKL222CP35995 705 aa9.75□□□□□ -0.85
PUP2YGR253C CWH41P53008 833 aa9.75□□□□□ -0.85
PUP2YGR253C ERT1P38140 529 aa9.74□□□□□ -0.85
PUP2YGR253C TUM1Q08686 304 aaKnown RBP9.74□□□□□ -0.85
PUP2YGR253C SSA4P22202 642 aaKnown RBP9.73□□□□□ -0.85
PUP2YGR253C BUB1P41695 1021 aaKnown RBP RIP-Chip data9.72□□□□□ -0.85not detected
PUP2YGR253C PEX21P50091 288 aa9.71□□□□□ -0.86
PUP2YGR253C CTI6Q08923 506 aa9.71□□□□□ -0.86
PUP2YGR253C NUP145P49687 1317 aa9.71□□□□□ -0.86
PUP2YGR253C HSP104P31539 908 aaKnown RBP9.7□□□□□ -0.86
PUP2YGR253C DSD1P53095 428 aa9.69□□□□□ -0.86
PUP2YGR253C NYV1Q12255 253 aa9.69□□□□□ -0.86
PUP2YGR253C KAR2P16474 682 aaKnown RBP9.68□□□□□ -0.86
PUP2YGR253C BUD27P43573 796 aaKnown RBP RIP-Chip data9.67□□□□□ -0.86not detected
PUP2YGR253C NST1P53935 1240 aa9.67□□□□□ -0.86
PUP2YGR253C CTF4Q01454 927 aa9.66□□□□□ -0.86
PUP2YGR253C PUS5Q06244 254 aa9.66□□□□□ -0.86
PUP2YGR253C FPK1P53739 893 aa9.65□□□□□ -0.86
PUP2YGR253C PFF1P38244 976 aa9.64□□□□□ -0.87
PUP2YGR253C TEA1P47988 759 aa9.64□□□□□ -0.87
PUP2YGR253C RMT2Q03305 412 aa9.64□□□□□ -0.87
PUP2YGR253C PDS5Q04264 1277 aa9.63□□□□□ -0.87
PUP2YGR253C TOP1P04786 769 aa9.62□□□□□ -0.87
PUP2YGR253C LPD1P09624 499 aaKnown RBP9.62□□□□□ -0.87
PUP2YGR253C SMY1P32364 656 aaKnown RBP9.62□□□□□ -0.87
PUP2YGR253C SLI15P38283 698 aa9.62□□□□□ -0.87
PUP2YGR253C PAP2P53632 584 aaKnown RBP9.62□□□□□ -0.87
PUP2YGR253C SER1P33330 395 aaKnown RBP9.61□□□□□ -0.87
PUP2YGR253C AKL1P38080 1108 aaKnown RBP9.61□□□□□ -0.87
PUP2YGR253C NOP53Q12080 455 aaKnown RBP9.61□□□□□ -0.87
PUP2YGR253C MDG1P53885 366 aa9.6□□□□□ -0.87
PUP2YGR253C AOS1Q06624 347 aa9.6□□□□□ -0.87
PUP2YGR253C ICL1P28240 557 aaPredicted RBP9.58□□□□□ -0.88
PUP2YGR253C YFR016CP43597 1233 aaKnown RBP9.58□□□□□ -0.88
PUP2YGR253C PHM7Q12252 991 aa9.58□□□□□ -0.88
PUP2YGR253C KCC4P25389 1037 aa9.57□□□□□ -0.88
PUP2YGR253C RAT1Q02792 1006 aaKnown RBP9.57□□□□□ -0.88
PUP2YGR253C ERO1Q03103 563 aa9.57□□□□□ -0.88
PUP2YGR253C ATG20Q07528 640 aa9.57□□□□□ -0.88
PUP2YGR253C ALE1Q08548 619 aa9.57□□□□□ -0.88
PUP2YGR253C THS1P04801 734 aaKnown RBP9.56□□□□□ -0.88
PUP2YGR253C RET1P22276 1149 aaKnown RBP9.56□□□□□ -0.88
PUP2YGR253C YGL082WP53155 381 aa9.56□□□□□ -0.88
PUP2YGR253C IRC3Q06683 689 aa9.56□□□□□ -0.88
PUP2YGR253C BDF2Q07442 638 aa9.55□□□□□ -0.88
PUP2YGR253C UTP10P42945 1769 aaKnown RBP9.55□□□□□ -0.88
PUP2YGR253C RPS9BP05755 195 aaKnown RBP9.54□□□□□ -0.88
PUP2YGR253C NTH2P35172 780 aa9.54□□□□□ -0.88
PUP2YGR253C TRK1P12685 1235 aa9.53□□□□□ -0.88
PUP2YGR253C CAF20P12962 161 aaKnown RBP9.53□□□□□ -0.88
PUP2YGR253C YKU70P32807 602 aa9.53□□□□□ -0.88
PUP2YGR253C SHC1P39000 512 aa9.53□□□□□ -0.88
PUP2YGR253C PMD1P32634 1753 aa9.51□□□□□ -0.89
PUP2YGR253C MRPL32P25348 183 aa9.51□□□□□ -0.89
PUP2YGR253C DIB1Q06819 143 aaPredicted RBP9.51□□□□□ -0.89
PUP2YGR253C SSP2Q08646 371 aa9.51□□□□□ -0.89
PUP2YGR253C SIT4P20604 311 aa9.5□□□□□ -0.89
PUP2YGR253C RTG2P32608 588 aaKnown RBP9.5□□□□□ -0.89
PUP2YGR253C GRX6Q12438 231 aa9.5□□□□□ -0.89
PUP2YGR253C YLR278CQ05854 1341 aa9.49□□□□□ -0.89
PUP2YGR253C FAS2P19097 1887 aaKnown RBP9.49□□□□□ -0.89
PUP2YGR253C DUS1P53759 423 aaKnown RBP9.48□□□□□ -0.89
PUP2YGR253C UGA3P26370 528 aa9.47□□□□□ -0.89
PUP2YGR253C POL5P39985 1022 aaKnown RBP9.47□□□□□ -0.89
PUP2YGR253C VHR2P40041 505 aa9.47□□□□□ -0.89
PUP2YGR253C DIP2Q12220 943 aaPredicted RBP9.47□□□□□ -0.89
PUP2YGR253C ARG8P18544 423 aa9.46□□□□□ -0.9
PUP2YGR253C DCD1P06773 312 aa9.45□□□□□ -0.9
PUP2YGR253C RPN1P38764 993 aaKnown RBP9.45□□□□□ -0.9
PUP2YGR253C NSE3Q05541 303 aa9.45□□□□□ -0.9
PUP2YGR253C APL2P36000 726 aaPredicted RBP9.44□□□□□ -0.9
PUP2YGR253C UBP16Q02863 499 aa9.44□□□□□ -0.9
PUP2YGR253C MSM1P22438 575 aa9.43□□□□□ -0.9
PUP2YGR253C FRD1P32614 470 aaKnown RBP9.43□□□□□ -0.9
PUP2YGR253C ETP1P38748 585 aaKnown RBP9.43□□□□□ -0.9
PUP2YGR253C SAS4Q04003 481 aa9.43□□□□□ -0.9
PUP2YGR253C GAP1P19145 602 aaPredicted RBP9.42□□□□□ -0.9
PUP2YGR253C FET4P40988 552 aa9.42□□□□□ -0.9
PUP2YGR253C SYF1Q04048 859 aaPredicted RBP9.42□□□□□ -0.9
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms