RNA–Protein interactions for RNA: YGR178C

PBP1, Transcript of Component of glucose deprivation induced stress granules, yeastyeast

Gene PBP1, Length 2,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PBP1YGR178C ALD4P46367 519 aaKnown RBP11.78□□□□□ -0.52
PBP1YGR178C YRF1-4O13559 1382 aa11.77□□□□□ -0.52
PBP1YGR178C RAD50P12753 1312 aa11.77□□□□□ -0.52
PBP1YGR178C RNA1P11745 407 aaKnown RBP11.77□□□□□ -0.53
PBP1YGR178C BDH2P39713 417 aa11.77□□□□□ -0.53
PBP1YGR178C BCK1Q01389 1478 aa11.77□□□□□ -0.53
PBP1YGR178C ECM16Q04217 1267 aaKnown RBP11.77□□□□□ -0.53
PBP1YGR178C VPS20Q04272 221 aa11.77□□□□□ -0.53
PBP1YGR178C BRN1P38170 754 aa11.76□□□□□ -0.53
PBP1YGR178C HIM1Q06674 414 aa11.76□□□□□ -0.53
PBP1YGR178C CLB5P30283 435 aa11.75□□□□□ -0.53
PBP1YGR178C GCR2Q01722 534 aa11.75□□□□□ -0.53
PBP1YGR178C TCD1P38756 429 aa11.75□□□□□ -0.53
PBP1YGR178C LTV1P34078 463 aa11.74□□□□□ -0.53
PBP1YGR178C RFC1P38630 861 aaKnown RBP11.74□□□□□ -0.53
PBP1YGR178C HST1P53685 503 aa11.74□□□□□ -0.53
PBP1YGR178C CAB1Q04430 367 aa11.72□□□□□ -0.53
PBP1YGR178C TYS1P36421 394 aaKnown RBP11.72□□□□□ -0.53
PBP1YGR178C HXT13P39924 564 aa11.72□□□□□ -0.53
PBP1YGR178C RSM25P40496 264 aa11.72□□□□□ -0.53
PBP1YGR178C KRE33P53914 1056 aaKnown RBP11.72□□□□□ -0.53
PBP1YGR178C HRQ1Q05549 1077 aa11.71□□□□□ -0.53
PBP1YGR178C APC11Q12157 165 aa11.71□□□□□ -0.53
PBP1YGR178C CYC8P14922 966 aa11.71□□□□□ -0.54
PBP1YGR178C CIN4P39110 191 aa11.71□□□□□ -0.54
PBP1YGR178C SFI1Q12369 946 aa11.71□□□□□ -0.54
PBP1YGR178C FPR4Q06205 392 aaPredicted RBP11.7□□□□□ -0.54
PBP1YGR178C SPB4P25808 606 aaPredicted RBP11.69□□□□□ -0.54
PBP1YGR178C DID4P36108 232 aa11.69□□□□□ -0.54
PBP1YGR178C BIK1P11709 440 aa11.69□□□□□ -0.54
PBP1YGR178C MFT1P33441 392 aaKnown RBP11.69□□□□□ -0.54
PBP1YGR178C STU2P46675 888 aa11.69□□□□□ -0.54
PBP1YGR178C HXT17P53631 564 aa11.69□□□□□ -0.54
PBP1YGR178C KEX1P09620 729 aa11.68□□□□□ -0.54
PBP1YGR178C SPO1P53541 631 aa11.67□□□□□ -0.54
PBP1YGR178C TIM50Q02776 476 aa11.67□□□□□ -0.54
PBP1YGR178C VPS60Q03390 229 aa11.67□□□□□ -0.54
PBP1YGR178C CWH41P53008 833 aa11.67□□□□□ -0.54
PBP1YGR178C TAP42Q04372 366 aa11.67□□□□□ -0.54
PBP1YGR178C UTP13Q05946 817 aaKnown RBP11.67□□□□□ -0.54
PBP1YGR178C USO1P25386 1790 aa11.66□□□□□ -0.54
PBP1YGR178C NMD2P38798 1089 aaKnown RBP11.66□□□□□ -0.54
PBP1YGR178C SWE1P32944 819 aa11.65□□□□□ -0.54
PBP1YGR178C YNG2P38806 282 aaKnown RBP11.65□□□□□ -0.54
PBP1YGR178C NUG1P40010 520 aaKnown RBP11.65□□□□□ -0.54
PBP1YGR178C NOP14Q99207 810 aaKnown RBP11.65□□□□□ -0.54
PBP1YGR178C RNR2P09938 399 aaKnown RBP11.65□□□□□ -0.54
PBP1YGR178C MRPL10P36520 322 aa11.65□□□□□ -0.54
PBP1YGR178C RPS0BP46654 252 aaKnown RBP11.65□□□□□ -0.54
PBP1YGR178C PDI1P17967 522 aaKnown RBP11.64□□□□□ -0.55
PBP1YGR178C SSL2Q00578 843 aa11.64□□□□□ -0.55
PBP1YGR178C AUS1Q08409 1394 aa11.64□□□□□ -0.55
PBP1YGR178C CLB1P24868 471 aa11.64□□□□□ -0.55
PBP1YGR178C MNR2P35724 969 aa11.64□□□□□ -0.55
PBP1YGR178C PBY1P38254 753 aa11.64□□□□□ -0.55
PBP1YGR178C KRI1P42846 591 aaKnown RBP11.64□□□□□ -0.55
PBP1YGR178C ENV11P53246 860 aa11.64□□□□□ -0.55
PBP1YGR178C DEP1P31385 405 aa11.63□□□□□ -0.55
PBP1YGR178C RIX1P38883 763 aaPredicted RBP11.62□□□□□ -0.55
PBP1YGR178C CSI1Q04368 295 aa11.62□□□□□ -0.55
PBP1YGR178C TRL1P09880 827 aaKnown RBP11.61□□□□□ -0.55
PBP1YGR178C DSN1P40568 576 aa11.61□□□□□ -0.55
PBP1YGR178C HYR1P40581 163 aaKnown RBP11.61□□□□□ -0.55
PBP1YGR178C CEP3P40969 608 aa11.61□□□□□ -0.55
PBP1YGR178C DUR1,2P32528 1835 aaKnown RBP11.6□□□□□ -0.55
PBP1YGR178C LYS2P07702 1392 aa11.59□□□□□ -0.55
PBP1YGR178C SES1P07284 462 aaKnown RBP11.59□□□□□ -0.55
PBP1YGR178C MPE1P35728 441 aaKnown RBP11.59□□□□□ -0.55
PBP1YGR178C IPL1P38991 367 aa11.59□□□□□ -0.55
PBP1YGR178C MRX12P47084 519 aa11.59□□□□□ -0.55
PBP1YGR178C RCM1P53972 490 aa11.59□□□□□ -0.55
PBP1YGR178C MED8P38304 223 aa11.58□□□□□ -0.56
PBP1YGR178C VAS1P07806 1104 aaKnown RBP11.58□□□□□ -0.56
PBP1YGR178C ECM1P39715 212 aa11.58□□□□□ -0.56
PBP1YGR178C GYP7P48365 746 aa11.58□□□□□ -0.56
PBP1YGR178C YBR287WP38355 427 aa11.57□□□□□ -0.56
PBP1YGR178C SRT1Q03175 343 aa11.57□□□□□ -0.56
PBP1YGR178C PPH3P32345 308 aa11.57□□□□□ -0.56
PBP1YGR178C PEX19Q07418 342 aa11.57□□□□□ -0.56
PBP1YGR178C SPC110P32380 944 aa11.56□□□□□ -0.56
PBP1YGR178C DSD1P53095 428 aa11.56□□□□□ -0.56
PBP1YGR178C GRX4P32642 244 aa11.55□□□□□ -0.56
PBP1YGR178C RTF1P53064 558 aa11.55□□□□□ -0.56
PBP1YGR178C RNT1Q02555 471 aa11.55□□□□□ -0.56
PBP1YGR178C BUB1P41695 1021 aaKnown RBP RIP-Chip data11.54□□□□□ -0.56not detected
PBP1YGR178C TRS33Q99394 268 aa11.54□□□□□ -0.56
PBP1YGR178C CCT5P40413 562 aaKnown RBP11.52□□□□□ -0.56
PBP1YGR178C BMS1Q08965 1183 aaKnown RBP11.52□□□□□ -0.56
PBP1YGR178C CDC16P09798 840 aa11.52□□□□□ -0.57
PBP1YGR178C PRP31P49704 494 aaPredicted RBP11.52□□□□□ -0.57
PBP1YGR178C YGL140CP53120 1219 aa11.52□□□□□ -0.57
PBP1YGR178C MSB4Q12317 492 aa11.52□□□□□ -0.57
PBP1YGR178C LEU2P04173 364 aaPredicted RBP11.51□□□□□ -0.57
PBP1YGR178C TAF13P11747 167 aa11.51□□□□□ -0.57
PBP1YGR178C NPR3P38742 1146 aa11.51□□□□□ -0.57
PBP1YGR178C GAS4Q08271 471 aa11.51□□□□□ -0.57
PBP1YGR178C ZDS1P50111 915 aaKnown RBP11.51□□□□□ -0.57
PBP1YGR178C RPS19AP07280 144 aaKnown RBP11.5□□□□□ -0.57
PBP1YGR178C RPS19BP07281 144 aaPredicted RBP11.5□□□□□ -0.57
PBP1YGR178C FRS2P15625 503 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 5,963 RNA–protein pairs in 27.7 ms