RNA–Protein interactions for RNA: YGR116W

SPT6, Transcript of Nucleosome remodeling protein, yeastyeast

Gene SPT6, Length 4,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT6YGR116W MCM2P29469 868 aa4.32□□□□□ -1.72
SPT6YGR116W YAP3P38749 330 aa4.32□□□□□ -1.72
SPT6YGR116W NUG1P40010 520 aaKnown RBP4.32□□□□□ -1.72
SPT6YGR116W DEP1P31385 405 aa4.31□□□□□ -1.72
SPT6YGR116W ALD4P46367 519 aaKnown RBP4.31□□□□□ -1.72
SPT6YGR116W TAP42Q04372 366 aa4.31□□□□□ -1.72
SPT6YGR116W TRP5P00931 707 aaKnown RBP4.31□□□□□ -1.72
SPT6YGR116W CLB1P24868 471 aa4.31□□□□□ -1.72
SPT6YGR116W PBY1P38254 753 aa4.31□□□□□ -1.72
SPT6YGR116W CIN4P39110 191 aa4.31□□□□□ -1.72
SPT6YGR116W CEP3P40969 608 aa4.31□□□□□ -1.72
SPT6YGR116W RRP46P53256 223 aaPredicted RBP4.31□□□□□ -1.72
SPT6YGR116W GCR2Q01722 534 aa4.31□□□□□ -1.72
SPT6YGR116W NKP2Q06162 153 aa4.31□□□□□ -1.72
SPT6YGR116W GRX4P32642 244 aa4.3□□□□□ -1.72
SPT6YGR116W HYR1P40581 163 aaKnown RBP4.3□□□□□ -1.72
SPT6YGR116W YGL081WP53156 320 aa4.3□□□□□ -1.72
SPT6YGR116W NOP14Q99207 810 aaKnown RBP4.3□□□□□ -1.72
SPT6YGR116W ROM2P51862 1356 aaKnown RBP4.3□□□□□ -1.72
SPT6YGR116W NMD2P38798 1089 aaKnown RBP4.3□□□□□ -1.72
SPT6YGR116W RTT109Q07794 436 aa4.3□□□□□ -1.72
SPT6YGR116W RFC1P38630 861 aaKnown RBP4.3□□□□□ -1.72
SPT6YGR116W DSN1P40568 576 aa4.3□□□□□ -1.72
SPT6YGR116W RRT14P40470 206 aa4.29□□□□□ -1.72
SPT6YGR116W VPS20Q04272 221 aa4.29□□□□□ -1.72
SPT6YGR116W NUP188P52593 1655 aaKnown RBP4.29□□□□□ -1.72
SPT6YGR116W YNG2P38806 282 aaKnown RBP4.29□□□□□ -1.72
SPT6YGR116W BCK1Q01389 1478 aa4.29□□□□□ -1.72
SPT6YGR116W SEC7P11075 2009 aaKnown RBP4.28□□□□□ -1.72
SPT6YGR116W SPT21P35209 758 aa4.28□□□□□ -1.72
SPT6YGR116W CIR1P42940 261 aa4.28□□□□□ -1.72
SPT6YGR116W NUP192P47054 1683 aa4.28□□□□□ -1.72
SPT6YGR116W MRPL10P36520 322 aa4.28□□□□□ -1.72
SPT6YGR116W PEX14P53112 341 aa4.28□□□□□ -1.72
SPT6YGR116W LYS2P07702 1392 aa4.28□□□□□ -1.72
SPT6YGR116W MFT1P33441 392 aaKnown RBP4.28□□□□□ -1.72
SPT6YGR116W GYP7P48365 746 aa4.28□□□□□ -1.72
SPT6YGR116W CLB5P30283 435 aa4.28□□□□□ -1.73
SPT6YGR116W NPA3P47122 385 aa4.28□□□□□ -1.73
SPT6YGR116W PSK1P31374 1356 aa4.27□□□□□ -1.73
SPT6YGR116W SPB4P25808 606 aaPredicted RBP4.27□□□□□ -1.73
SPT6YGR116W SPC110P32380 944 aa4.27□□□□□ -1.73
SPT6YGR116W HRQ1Q05549 1077 aa4.27□□□□□ -1.73
SPT6YGR116W TPM1P17536 199 aaKnown RBP4.27□□□□□ -1.73
SPT6YGR116W CWC22P53333 577 aaKnown RBP4.27□□□□□ -1.73
SPT6YGR116W GIN4Q12263 1142 aa4.27□□□□□ -1.73
SPT6YGR116W MRC1P25588 1096 aa4.26□□□□□ -1.73
SPT6YGR116W MPE1P35728 441 aaKnown RBP4.26□□□□□ -1.73
SPT6YGR116W DEF1P35732 738 aaKnown RBP4.26□□□□□ -1.73
SPT6YGR116W NOP8Q08287 484 aaPredicted RBP4.26□□□□□ -1.73
SPT6YGR116W DNF3Q12674 1656 aa4.26□□□□□ -1.73
SPT6YGR116W BRN1P38170 754 aa4.26□□□□□ -1.73
SPT6YGR116W MAM1P40065 302 aa4.26□□□□□ -1.73
SPT6YGR116W MSH4P40965 878 aaPredicted RBP4.26□□□□□ -1.73
SPT6YGR116W CWH41P53008 833 aa4.26□□□□□ -1.73
SPT6YGR116W PEX19Q07418 342 aa4.26□□□□□ -1.73
SPT6YGR116W APC11Q12157 165 aa4.26□□□□□ -1.73
SPT6YGR116W VAS1P07806 1104 aaKnown RBP4.26□□□□□ -1.73
SPT6YGR116W MRS2Q01926 470 aa4.26□□□□□ -1.73
SPT6YGR116W DID4P36108 232 aa4.25□□□□□ -1.73
SPT6YGR116W SPO1P53541 631 aa4.25□□□□□ -1.73
SPT6YGR116W UTP13Q05946 817 aaKnown RBP4.25□□□□□ -1.73
SPT6YGR116W SES1P07284 462 aaKnown RBP4.25□□□□□ -1.73
SPT6YGR116W CCT5P40413 562 aaKnown RBP4.25□□□□□ -1.73
SPT6YGR116W TIM50Q02776 476 aa4.25□□□□□ -1.73
SPT6YGR116W CAB1Q04430 367 aa4.25□□□□□ -1.73
SPT6YGR116W MRX12P47084 519 aa4.25□□□□□ -1.73
SPT6YGR116W PRP3Q03338 469 aaPredicted RBP4.25□□□□□ -1.73
SPT6YGR116W RPO41P13433 1351 aaKnown RBP4.25□□□□□ -1.73
SPT6YGR116W TTI1P36097 1038 aa4.24□□□□□ -1.73
SPT6YGR116W HGH1P48362 394 aaKnown RBP4.24□□□□□ -1.73
SPT6YGR116W ZDS1P50111 915 aaKnown RBP4.24□□□□□ -1.73
SPT6YGR116W KRE33P53914 1056 aaKnown RBP4.24□□□□□ -1.73
SPT6YGR116W LEU2P04173 364 aaPredicted RBP4.24□□□□□ -1.73
SPT6YGR116W HXT13P39924 564 aa4.24□□□□□ -1.73
SPT6YGR116W RPL19AP0CX82 189 aaKnown RBP4.24□□□□□ -1.73
SPT6YGR116W RPL19BP0CX83 189 aaPredicted RBP4.24□□□□□ -1.73
SPT6YGR116W BDP1P46678 594 aa4.24□□□□□ -1.73
SPT6YGR116W HIM1Q06674 414 aa4.24□□□□□ -1.73
SPT6YGR116W PET111P08468 800 aa4.23□□□□□ -1.73
SPT6YGR116W RTT107P38850 1070 aa4.23□□□□□ -1.73
SPT6YGR116W IPL1P38991 367 aa4.23□□□□□ -1.73
SPT6YGR116W MTR4P47047 1073 aaKnown RBP4.23□□□□□ -1.73
SPT6YGR116W ELM1P32801 640 aa4.23□□□□□ -1.73
SPT6YGR116W YNL050CP53952 270 aa4.23□□□□□ -1.73
SPT6YGR116W CSI1Q04368 295 aa4.23□□□□□ -1.73
SPT6YGR116W SGD1Q06132 899 aa4.23□□□□□ -1.73
SPT6YGR116W JSN1P47135 1091 aaKnown RBP RIP-Chip data4.23□□□□□ -1.73not detected
SPT6YGR116W TFG2P41896 400 aaPredicted RBP4.23□□□□□ -1.73
SPT6YGR116W BBC1P47068 1157 aa4.23□□□□□ -1.73
SPT6YGR116W CBF5P33322 483 aaKnown RBP RIP-Chip data4.22□□□□□ -1.73not detected
SPT6YGR116W ECM1P39715 212 aa4.22□□□□□ -1.73
SPT6YGR116W CDC16P09798 840 aa4.22□□□□□ -1.73
SPT6YGR116W NPR3P38742 1146 aa4.22□□□□□ -1.73
SPT6YGR116W AKL1P38080 1108 aaKnown RBP4.22□□□□□ -1.73
SPT6YGR116W VPS41P38959 992 aa4.22□□□□□ -1.73
SPT6YGR116W PRP31P49704 494 aaPredicted RBP4.22□□□□□ -1.73
SPT6YGR116W DSD1P53095 428 aa4.22□□□□□ -1.73
SPT6YGR116W SRT1Q03175 343 aa4.22□□□□□ -1.73
SPT6YGR116W RPS19AP07280 144 aaKnown RBP4.21□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 8.3 ms