RNA–Protein interactions for RNA: YGL244W

RTF1, Transcript of Subunit of RNAPII-associated chromatin remodeling Paf1 complex, yeastyeast

Gene RTF1, Length 1,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTF1YGL244W ZDS1P50111 915 aaKnown RBP13.7□□□□□ -0.22
RTF1YGL244W SRT1Q03175 343 aa13.7□□□□□ -0.22
RTF1YGL244W COG8Q04632 607 aa13.7□□□□□ -0.22
RTF1YGL244W NUP145P49687 1317 aa13.7□□□□□ -0.22
RTF1YGL244W MAM1P40065 302 aa13.69□□□□□ -0.22
RTF1YGL244W PRP43P53131 767 aaKnown RBP13.69□□□□□ -0.22
RTF1YGL244W GCR2Q01722 534 aa13.69□□□□□ -0.22
RTF1YGL244W YPP1P46951 817 aa13.68□□□□□ -0.22
RTF1YGL244W SPO1P53541 631 aa13.68□□□□□ -0.22
RTF1YGL244W YNR029CP53729 429 aaKnown RBP13.68□□□□□ -0.22
RTF1YGL244W HAP5Q02516 242 aa13.68□□□□□ -0.22
RTF1YGL244W CSI1Q04368 295 aa13.68□□□□□ -0.22
RTF1YGL244W RFC1P38630 861 aaKnown RBP13.67□□□□□ -0.22
RTF1YGL244W CTR9P89105 1077 aa13.67□□□□□ -0.22
RTF1YGL244W LEO1P38439 464 aa13.66□□□□□ -0.22
RTF1YGL244W NMD2P38798 1089 aaKnown RBP13.66□□□□□ -0.22
RTF1YGL244W ADE6P38972 1358 aaKnown RBP13.65□□□□□ -0.22
RTF1YGL244W BRN1P38170 754 aa13.64□□□□□ -0.23
RTF1YGL244W NTH2P35172 780 aa13.63□□□□□ -0.23
RTF1YGL244W RPS19AP07280 144 aaKnown RBP13.63□□□□□ -0.23
RTF1YGL244W RPS19BP07281 144 aaPredicted RBP13.63□□□□□ -0.23
RTF1YGL244W YBR287WP38355 427 aa13.63□□□□□ -0.23
RTF1YGL244W LCD1Q04377 747 aa13.62□□□□□ -0.23
RTF1YGL244W RSC1P53236 928 aa13.59□□□□□ -0.23
RTF1YGL244W PIL1P53252 339 aaKnown RBP13.59□□□□□ -0.23
RTF1YGL244W BDH2P39713 417 aa13.59□□□□□ -0.23
RTF1YGL244W BMS1Q08965 1183 aaKnown RBP13.59□□□□□ -0.23
RTF1YGL244W ROM2P51862 1356 aaKnown RBP13.58□□□□□ -0.24
RTF1YGL244W HXT13P39924 564 aa13.57□□□□□ -0.24
RTF1YGL244W NPA3P47122 385 aa13.57□□□□□ -0.24
RTF1YGL244W CDC16P09798 840 aa13.55□□□□□ -0.24
RTF1YGL244W RNR2P09938 399 aaKnown RBP13.55□□□□□ -0.24
RTF1YGL244W HST1P53685 503 aa13.55□□□□□ -0.24
RTF1YGL244W MAK10Q02197 733 aa13.55□□□□□ -0.24
RTF1YGL244W VPS20Q04272 221 aa13.55□□□□□ -0.24
RTF1YGL244W NOP58Q12499 511 aaKnown RBP13.55□□□□□ -0.24
RTF1YGL244W COQ4O13525 335 aa13.54□□□□□ -0.24
RTF1YGL244W RKM3P38222 552 aa13.54□□□□□ -0.24
RTF1YGL244W CIR1P42940 261 aa13.53□□□□□ -0.24
RTF1YGL244W HXT17P53631 564 aa13.53□□□□□ -0.24
RTF1YGL244W NOP8Q08287 484 aaPredicted RBP13.53□□□□□ -0.24
RTF1YGL244W YRF1-2P40105 1681 aa13.53□□□□□ -0.24
RTF1YGL244W HSP104P31539 908 aaKnown RBP13.53□□□□□ -0.24
RTF1YGL244W YGL081WP53156 320 aa13.53□□□□□ -0.24
RTF1YGL244W AOS1Q06624 347 aa13.52□□□□□ -0.25
RTF1YGL244W VAS1P07806 1104 aaKnown RBP13.51□□□□□ -0.25
RTF1YGL244W MDG1P53885 366 aa13.51□□□□□ -0.25
RTF1YGL244W RRP5Q05022 1729 aaKnown RBP13.51□□□□□ -0.25
RTF1YGL244W BIK1P11709 440 aa13.5□□□□□ -0.25
RTF1YGL244W RPN12P32496 274 aa13.5□□□□□ -0.25
RTF1YGL244W GCD7P32502 381 aaPredicted RBP13.5□□□□□ -0.25
RTF1YGL244W RAD24P32641 659 aa13.5□□□□□ -0.25
RTF1YGL244W RVS167P39743 482 aaKnown RBP13.5□□□□□ -0.25
RTF1YGL244W HRQ1Q05549 1077 aa13.5□□□□□ -0.25
RTF1YGL244W KEX1P09620 729 aa13.48□□□□□ -0.25
RTF1YGL244W RSM25P40496 264 aa13.48□□□□□ -0.25
RTF1YGL244W HYR1P40581 163 aaKnown RBP13.47□□□□□ -0.25
RTF1YGL244W YGR122WP53272 402 aa13.47□□□□□ -0.25
RTF1YGL244W LYS2P07702 1392 aa13.47□□□□□ -0.25
RTF1YGL244W TRL1P09880 827 aaKnown RBP13.47□□□□□ -0.25
RTF1YGL244W BDP1P46678 594 aa13.47□□□□□ -0.25
RTF1YGL244W NSE3Q05541 303 aa13.47□□□□□ -0.25
RTF1YGL244W AIM44Q99299 758 aa13.47□□□□□ -0.25
RTF1YGL244W HGH1P48362 394 aaKnown RBP13.46□□□□□ -0.26
RTF1YGL244W CTF4Q01454 927 aa13.46□□□□□ -0.26
RTF1YGL244W QCR6P00127 147 aa13.45□□□□□ -0.26
RTF1YGL244W MCM2P29469 868 aa13.45□□□□□ -0.26
RTF1YGL244W MIC60P36112 540 aa13.45□□□□□ -0.26
RTF1YGL244W KRE33P53914 1056 aaKnown RBP13.45□□□□□ -0.26
RTF1YGL244W UGA3P26370 528 aa13.44□□□□□ -0.26
RTF1YGL244W ESC2Q06340 456 aa13.44□□□□□ -0.26
RTF1YGL244W YOL057WQ08225 711 aa13.44□□□□□ -0.26
RTF1YGL244W YIL177CP40434 1758 aa13.44□□□□□ -0.26
RTF1YGL244W YJL225CP40889 1758 aa13.44□□□□□ -0.26
RTF1YGL244W TY4B-HP0C2J7 1802 aa13.44□□□□□ -0.26
RTF1YGL244W TY4B-JP47024 1803 aa13.44□□□□□ -0.26
RTF1YGL244W MRP7P12687 371 aa13.43□□□□□ -0.26
RTF1YGL244W BOI2P39969 1040 aa13.42□□□□□ -0.26
RTF1YGL244W APC11Q12157 165 aa13.4□□□□□ -0.26
RTF1YGL244W DUR1,2P32528 1835 aaKnown RBP13.4□□□□□ -0.26
RTF1YGL244W SWC3P31376 625 aa13.39□□□□□ -0.27
RTF1YGL244W TPM2P40414 161 aa13.39□□□□□ -0.27
RTF1YGL244W RAD4P14736 754 aa13.38□□□□□ -0.27
RTF1YGL244W KCC4P25389 1037 aa13.38□□□□□ -0.27
RTF1YGL244W CWH41P53008 833 aa13.38□□□□□ -0.27
RTF1YGL244W KRI1P42846 591 aaKnown RBP13.37□□□□□ -0.27
RTF1YGL244W FPR4Q06205 392 aaPredicted RBP13.37□□□□□ -0.27
RTF1YGL244W YDR306CQ06640 478 aa13.37□□□□□ -0.27
RTF1YGL244W DID4P36108 232 aa13.37□□□□□ -0.27
RTF1YGL244W PEX19Q07418 342 aa13.37□□□□□ -0.27
RTF1YGL244W FKS3Q04952 1785 aa13.36□□□□□ -0.27
RTF1YGL244W URB1P34241 1764 aaKnown RBP13.34□□□□□ -0.27
RTF1YGL244W RPL19AP0CX82 189 aaKnown RBP13.34□□□□□ -0.27
RTF1YGL244W RPL19BP0CX83 189 aaPredicted RBP13.34□□□□□ -0.27
RTF1YGL244W MRPL10P36520 322 aa13.33□□□□□ -0.28
RTF1YGL244W RIM20Q12033 661 aa13.33□□□□□ -0.28
RTF1YGL244W NCB2Q92317 146 aa13.33□□□□□ -0.28
RTF1YGL244W TAF13P11747 167 aa13.32□□□□□ -0.28
RTF1YGL244W AAP1P37898 856 aaKnown RBP13.32□□□□□ -0.28
RTF1YGL244W ECM21P38167 1117 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 5,963 RNA–protein pairs in 32.7 ms