RNA–Protein interactions for RNA: YGL221C

NIF3, Transcript of Protein of unknown function, yeastyeast

Gene NIF3, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIF3YGL221C MSB4Q12317 492 aa11.27□□□□□ -0.61
NIF3YGL221C NUP145P49687 1317 aa11.27□□□□□ -0.61
NIF3YGL221C RRP46P53256 223 aaPredicted RBP11.26□□□□□ -0.61
NIF3YGL221C TUM1Q08686 304 aaKnown RBP11.25□□□□□ -0.61
NIF3YGL221C RPG1P38249 964 aaKnown RBP11.24□□□□□ -0.61
NIF3YGL221C YBP2P53169 641 aa11.24□□□□□ -0.61
NIF3YGL221C GRE2Q12068 342 aaKnown RBP11.24□□□□□ -0.61
NIF3YGL221C SPT7P35177 1332 aa11.21□□□□□ -0.61
NIF3YGL221C GRX1P25373 110 aaKnown RBP11.21□□□□□ -0.61
NIF3YGL221C BDF1P35817 686 aa11.21□□□□□ -0.61
NIF3YGL221C NTH2P35172 780 aa11.2□□□□□ -0.62
NIF3YGL221C ALD3P54114 506 aa11.2□□□□□ -0.62
NIF3YGL221C CTF4Q01454 927 aa11.19□□□□□ -0.62
NIF3YGL221C AOS1Q06624 347 aa11.19□□□□□ -0.62
NIF3YGL221C BUG1Q12191 341 aa11.19□□□□□ -0.62
NIF3YGL221C RIM15P43565 1770 aa11.18□□□□□ -0.62
NIF3YGL221C RAD4P14736 754 aa11.18□□□□□ -0.62
NIF3YGL221C ALE1Q08548 619 aa11.17□□□□□ -0.62
NIF3YGL221C RTR1P40084 226 aaPredicted RBP11.16□□□□□ -0.62
NIF3YGL221C BUD27P43573 796 aaKnown RBP RIP-Chip data11.14□□□□□ -0.63not detected
NIF3YGL221C RIX7Q07844 837 aaKnown RBP11.14□□□□□ -0.63
NIF3YGL221C KCC4P25389 1037 aa11.13□□□□□ -0.63
NIF3YGL221C TOS1P38288 455 aa11.13□□□□□ -0.63
NIF3YGL221C EAF6P47128 113 aa11.13□□□□□ -0.63
NIF3YGL221C HPC2Q01448 625 aa11.13□□□□□ -0.63
NIF3YGL221C RMT2Q03305 412 aa11.13□□□□□ -0.63
NIF3YGL221C CTI6Q08923 506 aa11.12□□□□□ -0.63
NIF3YGL221C PRD1P25375 712 aa11.11□□□□□ -0.63
NIF3YGL221C NOP53Q12080 455 aaKnown RBP11.11□□□□□ -0.63
NIF3YGL221C NYV1Q12255 253 aa11.11□□□□□ -0.63
NIF3YGL221C MPP10P47083 593 aaKnown RBP11.1□□□□□ -0.63
NIF3YGL221C TEA1P47988 759 aa11.1□□□□□ -0.63
NIF3YGL221C UTP22P53254 1237 aaPredicted RBP11.1□□□□□ -0.63
NIF3YGL221C SSA1P10591 642 aaKnown RBP11.08□□□□□ -0.64
NIF3YGL221C YBR287WP38355 427 aa11.08□□□□□ -0.64
NIF3YGL221C YNL050CP53952 270 aa11.08□□□□□ -0.64
NIF3YGL221C THI22Q06490 572 aa11.08□□□□□ -0.64
NIF3YGL221C SER1P33330 395 aaKnown RBP11.06□□□□□ -0.64
NIF3YGL221C SAP155P43612 1002 aa11.06□□□□□ -0.64
NIF3YGL221C MSN5P52918 1224 aa11.06□□□□□ -0.64
NIF3YGL221C YGL082WP53155 381 aa11.05□□□□□ -0.64
NIF3YGL221C RTT109Q07794 436 aa11.05□□□□□ -0.64
NIF3YGL221C UGA3P26370 528 aa11.04□□□□□ -0.64
NIF3YGL221C ZDS2P54786 942 aa11.04□□□□□ -0.64
NIF3YGL221C YDL144CQ07589 356 aa11.04□□□□□ -0.64
NIF3YGL221C COQ4O13525 335 aa11.03□□□□□ -0.64
NIF3YGL221C APL2P36000 726 aaPredicted RBP11.03□□□□□ -0.64
NIF3YGL221C RRT14P40470 206 aa11.03□□□□□ -0.64
NIF3YGL221C ZDS1P50111 915 aaKnown RBP11.03□□□□□ -0.64
NIF3YGL221C NSE3Q05541 303 aa11.03□□□□□ -0.64
NIF3YGL221C DCD1P06773 312 aa11.02□□□□□ -0.65
NIF3YGL221C YFR016CP43597 1233 aaKnown RBP11.02□□□□□ -0.65
NIF3YGL221C BMS1Q08965 1183 aaKnown RBP11.02□□□□□ -0.65
NIF3YGL221C PHM7Q12252 991 aa11.02□□□□□ -0.65
NIF3YGL221C TPD3P31383 635 aa11.01□□□□□ -0.65
NIF3YGL221C CWH41P53008 833 aa11.01□□□□□ -0.65
NIF3YGL221C ARG8P18544 423 aa11□□□□□ -0.65
NIF3YGL221C VPS64Q03944 604 aa11□□□□□ -0.65
NIF3YGL221C LPD1P09624 499 aaKnown RBP10.99□□□□□ -0.65
NIF3YGL221C KIN4Q01919 800 aa10.99□□□□□ -0.65
NIF3YGL221C IOC4Q04213 475 aa10.99□□□□□ -0.65
NIF3YGL221C SSP2Q08646 371 aa10.99□□□□□ -0.65
NIF3YGL221C MDG1P53885 366 aa10.98□□□□□ -0.65
NIF3YGL221C CTT1P06115 562 aa10.97□□□□□ -0.65
NIF3YGL221C CAF20P12962 161 aaKnown RBP10.97□□□□□ -0.65
NIF3YGL221C MAM1P40065 302 aa10.97□□□□□ -0.65
NIF3YGL221C HEF3P53978 1044 aaKnown RBP10.97□□□□□ -0.65
NIF3YGL221C ERT1P38140 529 aa10.96□□□□□ -0.65
NIF3YGL221C GYP7P48365 746 aa10.96□□□□□ -0.65
NIF3YGL221C YPR204WQ08995 1032 aa10.96□□□□□ -0.65
NIF3YGL221C YER156CP40093 338 aaKnown RBP10.95□□□□□ -0.66
NIF3YGL221C SMY1P32364 656 aaKnown RBP10.94□□□□□ -0.66
NIF3YGL221C YKL222CP35995 705 aa10.94□□□□□ -0.66
NIF3YGL221C SUI2P20459 304 aaKnown RBP10.92□□□□□ -0.66
NIF3YGL221C YOL057WQ08225 711 aa10.92□□□□□ -0.66
NIF3YGL221C PFF1P38244 976 aa10.91□□□□□ -0.66
NIF3YGL221C SQS1P53866 767 aaKnown RBP10.91□□□□□ -0.66
NIF3YGL221C RAT1Q02792 1006 aaKnown RBP10.91□□□□□ -0.66
NIF3YGL221C SRT1Q03175 343 aa10.91□□□□□ -0.66
NIF3YGL221C BDF2Q07442 638 aa10.91□□□□□ -0.66
NIF3YGL221C LYS2P07702 1392 aa10.9□□□□□ -0.66
NIF3YGL221C FCP1Q03254 732 aa10.89□□□□□ -0.67
NIF3YGL221C IRC3Q06683 689 aa10.89□□□□□ -0.67
NIF3YGL221C TOP1P04786 769 aa10.88□□□□□ -0.67
NIF3YGL221C YGR122WP53272 402 aa10.88□□□□□ -0.67
NIF3YGL221C UTP10P42945 1769 aaKnown RBP10.88□□□□□ -0.67
NIF3YGL221C SWI1P09547 1314 aa10.86□□□□□ -0.67
NIF3YGL221C ICL1P28240 557 aaPredicted RBP10.86□□□□□ -0.67
NIF3YGL221C PKH1Q03407 766 aa10.86□□□□□ -0.67
NIF3YGL221C ERO1Q03103 563 aa10.85□□□□□ -0.67
NIF3YGL221C YDR306CQ06640 478 aa10.85□□□□□ -0.67
NIF3YGL221C MRP7P12687 371 aa10.84□□□□□ -0.67
NIF3YGL221C FRD1P32614 470 aaKnown RBP10.84□□□□□ -0.67
NIF3YGL221C NUP133P36161 1157 aa10.84□□□□□ -0.67
NIF3YGL221C UBP16Q02863 499 aa10.84□□□□□ -0.67
NIF3YGL221C HAT1Q12341 374 aa10.84□□□□□ -0.67
NIF3YGL221C PMD1P32634 1753 aa10.83□□□□□ -0.68
NIF3YGL221C RPN1P38764 993 aaKnown RBP10.83□□□□□ -0.68
NIF3YGL221C DNM1P54861 757 aa10.83□□□□□ -0.68
NIF3YGL221C YLR271WQ06152 274 aa10.83□□□□□ -0.68
Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms