RNA–Protein interactions for RNA: YFL047W

RGD2, Transcript of GTPase-activating protein (RhoGAP) for Cdc42p and Rho5p, yeastyeast

Gene RGD2, Length 2,145 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RGD2YFL047W SPO1P53541 631 aa8.12□□□□□ -1.11
RGD2YFL047W EDE1P34216 1381 aa8.12□□□□□ -1.11
RGD2YFL047W RPS19AP07280 144 aaKnown RBP8.11□□□□□ -1.11
RGD2YFL047W RPS19BP07281 144 aaPredicted RBP8.11□□□□□ -1.11
RGD2YFL047W MSP1P28737 362 aa8.11□□□□□ -1.11
RGD2YFL047W ECM16Q04217 1267 aaKnown RBP8.11□□□□□ -1.11
RGD2YFL047W LSP1Q12230 341 aaKnown RBP8.11□□□□□ -1.11
RGD2YFL047W YMR196WQ04336 1088 aa8.09□□□□□ -1.11
RGD2YFL047W AOS1Q06624 347 aa8.09□□□□□ -1.11
RGD2YFL047W YRF1-2P40105 1681 aa8.09□□□□□ -1.11
RGD2YFL047W RAD24P32641 659 aa8.09□□□□□ -1.11
RGD2YFL047W RFC1P38630 861 aaKnown RBP8.09□□□□□ -1.11
RGD2YFL047W YGR122WP53272 402 aa8.09□□□□□ -1.11
RGD2YFL047W DLD1P32891 587 aa8.08□□□□□ -1.12
RGD2YFL047W THI12P42883 340 aa8.08□□□□□ -1.12
RGD2YFL047W THI5P43534 340 aa8.08□□□□□ -1.12
RGD2YFL047W THI11P47183 340 aa8.08□□□□□ -1.12
RGD2YFL047W THI13Q07748 340 aa8.08□□□□□ -1.12
RGD2YFL047W RAD50P12753 1312 aa8.08□□□□□ -1.12
RGD2YFL047W GCR2Q01722 534 aa8.08□□□□□ -1.12
RGD2YFL047W BRN1P38170 754 aa8.07□□□□□ -1.12
RGD2YFL047W NMD2P38798 1089 aaKnown RBP8.07□□□□□ -1.12
RGD2YFL047W RRP5Q05022 1729 aaKnown RBP8.07□□□□□ -1.12
RGD2YFL047W TEA1P47988 759 aa8.06□□□□□ -1.12
RGD2YFL047W ITC1P53125 1264 aa8.06□□□□□ -1.12
RGD2YFL047W CTF4Q01454 927 aa8.06□□□□□ -1.12
RGD2YFL047W NUP145P49687 1317 aa8.06□□□□□ -1.12
RGD2YFL047W PRP5P21372 849 aaPredicted RBP8.06□□□□□ -1.12
RGD2YFL047W SLM3Q12093 417 aa8.06□□□□□ -1.12
RGD2YFL047W SRS2P12954 1174 aa8.05□□□□□ -1.12
RGD2YFL047W KNS1P32350 737 aaPredicted RBP8.05□□□□□ -1.12
RGD2YFL047W YOL057WQ08225 711 aa8.05□□□□□ -1.12
RGD2YFL047W GCD7P32502 381 aaPredicted RBP8.05□□□□□ -1.12
RGD2YFL047W ARL1P38116 183 aaKnown RBP8.05□□□□□ -1.12
RGD2YFL047W HXT13P39924 564 aa8.05□□□□□ -1.12
RGD2YFL047W NSE3Q05541 303 aa8.05□□□□□ -1.12
RGD2YFL047W YIL177CP40434 1758 aa8.04□□□□□ -1.12
RGD2YFL047W YJL225CP40889 1758 aa8.04□□□□□ -1.12
RGD2YFL047W UGA3P26370 528 aa8.04□□□□□ -1.12
RGD2YFL047W MSB3P48566 633 aaPredicted RBP8.04□□□□□ -1.12
RGD2YFL047W CDC16P09798 840 aa8.03□□□□□ -1.12
RGD2YFL047W RAD4P14736 754 aa8.03□□□□□ -1.12
RGD2YFL047W SWC3P31376 625 aa8.03□□□□□ -1.12
RGD2YFL047W RCR1P38212 213 aa8.03□□□□□ -1.12
RGD2YFL047W HXT17P53631 564 aa8.03□□□□□ -1.12
RGD2YFL047W TY4B-HP0C2J7 1802 aa8.03□□□□□ -1.12
RGD2YFL047W TY4B-JP47024 1803 aa8.03□□□□□ -1.12
RGD2YFL047W KCC4P25389 1037 aa8.02□□□□□ -1.13
RGD2YFL047W PRP45P28004 379 aaPredicted RBP8.02□□□□□ -1.13
RGD2YFL047W YDR306CQ06640 478 aa8.02□□□□□ -1.13
RGD2YFL047W NOP8Q08287 484 aaPredicted RBP8.02□□□□□ -1.13
RGD2YFL047W MRP7P12687 371 aa8.02□□□□□ -1.13
RGD2YFL047W CAB3P36076 571 aa8.02□□□□□ -1.13
RGD2YFL047W BOI2P39969 1040 aa8.02□□□□□ -1.13
RGD2YFL047W ROM2P51862 1356 aaKnown RBP8.01□□□□□ -1.13
RGD2YFL047W XKS1P42826 600 aa8□□□□□ -1.13
RGD2YFL047W NPA3P47122 385 aa8□□□□□ -1.13
RGD2YFL047W ZDS2P54786 942 aa8□□□□□ -1.13
RGD2YFL047W HAP5Q02516 242 aa8□□□□□ -1.13
RGD2YFL047W LYS2P07702 1392 aa8□□□□□ -1.13
RGD2YFL047W INP54Q08227 384 aaKnown RBP8□□□□□ -1.13
RGD2YFL047W NOT3P06102 836 aaKnown RBP7.99□□□□□ -1.13
RGD2YFL047W TRL1P09880 827 aaKnown RBP7.99□□□□□ -1.13
RGD2YFL047W ALE1Q08548 619 aa7.98□□□□□ -1.13
RGD2YFL047W VAS1P07806 1104 aaKnown RBP7.97□□□□□ -1.13
RGD2YFL047W BDP1P46678 594 aa7.97□□□□□ -1.13
RGD2YFL047W HGH1P48362 394 aaKnown RBP7.97□□□□□ -1.13
RGD2YFL047W VPS20Q04272 221 aa7.97□□□□□ -1.13
RGD2YFL047W TCB1Q12466 1186 aa7.97□□□□□ -1.13
RGD2YFL047W BDH2P39713 417 aa7.96□□□□□ -1.13
RGD2YFL047W URB1P34241 1764 aaKnown RBP7.96□□□□□ -1.14
RGD2YFL047W EBP2P36049 427 aaKnown RBP7.96□□□□□ -1.14
RGD2YFL047W PTP3P40048 928 aa7.96□□□□□ -1.14
RGD2YFL047W SWI1P09547 1314 aa7.95□□□□□ -1.14
RGD2YFL047W CIR1P42940 261 aa7.95□□□□□ -1.14
RGD2YFL047W FAP1P53971 965 aa7.95□□□□□ -1.14
RGD2YFL047W RNR2P09938 399 aaKnown RBP7.94□□□□□ -1.14
RGD2YFL047W NUP133P36161 1157 aa7.94□□□□□ -1.14
RGD2YFL047W HRQ1Q05549 1077 aa7.94□□□□□ -1.14
RGD2YFL047W CST6P40535 587 aa7.94□□□□□ -1.14
RGD2YFL047W YGL081WP53156 320 aa7.94□□□□□ -1.14
RGD2YFL047W DNM1P54861 757 aa7.94□□□□□ -1.14
RGD2YFL047W RMD1Q03441 430 aa7.94□□□□□ -1.14
RGD2YFL047W COG8Q04632 607 aa7.94□□□□□ -1.14
RGD2YFL047W YJR008WP47085 338 aa7.93□□□□□ -1.14
RGD2YFL047W FKS3Q04952 1785 aa7.93□□□□□ -1.14
RGD2YFL047W RSC1P53236 928 aa7.93□□□□□ -1.14
RGD2YFL047W ADE16P54113 591 aaKnown RBP7.93□□□□□ -1.14
RGD2YFL047W LPD1P09624 499 aaKnown RBP7.92□□□□□ -1.14
RGD2YFL047W OSM1P21375 501 aaKnown RBP7.92□□□□□ -1.14
RGD2YFL047W ECM21P38167 1117 aaKnown RBP7.92□□□□□ -1.14
RGD2YFL047W UBP12P39538 1254 aa7.92□□□□□ -1.14
RGD2YFL047W HST1P53685 503 aa7.92□□□□□ -1.14
RGD2YFL047W AAP1P37898 856 aaKnown RBP7.91□□□□□ -1.14
RGD2YFL047W KRE33P53914 1056 aaKnown RBP7.91□□□□□ -1.14
RGD2YFL047W CTR9P89105 1077 aa7.91□□□□□ -1.14
RGD2YFL047W BIK1P11709 440 aa7.91□□□□□ -1.14
RGD2YFL047W MEC3Q02574 474 aa7.91□□□□□ -1.14
RGD2YFL047W LCD1Q04377 747 aa7.91□□□□□ -1.14
RGD2YFL047W RIM20Q12033 661 aa7.91□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 9.7 ms