RNA–Protein interactions for RNA: YDR182W

CDC1, Transcript of Putative lipid phosphatase of the endoplasmic reticulum, yeastyeast

Gene CDC1, Length 1,476 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC1YDR182W PDI1P17967 522 aaKnown RBP8.66□□□□□ -1.02
CDC1YDR182W SIR4P11978 1358 aa8.66□□□□□ -1.02
CDC1YDR182W RTF1P53064 558 aa8.65□□□□□ -1.02
CDC1YDR182W MEC3Q02574 474 aa8.65□□□□□ -1.02
CDC1YDR182W RPO41P13433 1351 aaKnown RBP8.64□□□□□ -1.03
CDC1YDR182W AUS1Q08409 1394 aa8.64□□□□□ -1.03
CDC1YDR182W HIM1Q06674 414 aa8.63□□□□□ -1.03
CDC1YDR182W SCT1P32784 759 aa8.62□□□□□ -1.03
CDC1YDR182W BDF1P35817 686 aa8.61□□□□□ -1.03
CDC1YDR182W ATG13Q06628 738 aa8.61□□□□□ -1.03
CDC1YDR182W MSB4Q12317 492 aa8.6□□□□□ -1.03
CDC1YDR182W SEC3P33332 1336 aaKnown RBP8.6□□□□□ -1.03
CDC1YDR182W SPT7P35177 1332 aa8.59□□□□□ -1.03
CDC1YDR182W ALD3P54114 506 aa8.59□□□□□ -1.03
CDC1YDR182W SSP1P38871 571 aa8.57□□□□□ -1.04
CDC1YDR182W TAP42Q04372 366 aa8.57□□□□□ -1.04
CDC1YDR182W INP54Q08227 384 aaKnown RBP8.57□□□□□ -1.04
CDC1YDR182W GRX4P32642 244 aa8.57□□□□□ -1.04
CDC1YDR182W EAF6P47128 113 aa8.57□□□□□ -1.04
CDC1YDR182W BUG1Q12191 341 aa8.57□□□□□ -1.04
CDC1YDR182W OSM1P21375 501 aaKnown RBP8.56□□□□□ -1.04
CDC1YDR182W BUB1P41695 1021 aaKnown RBP RIP-Chip data8.56□□□□□ -1.04not detected
CDC1YDR182W GRE2Q12068 342 aaKnown RBP8.56□□□□□ -1.04
CDC1YDR182W BCH2P36122 765 aa8.55□□□□□ -1.04
CDC1YDR182W RAD4P14736 754 aa8.53□□□□□ -1.04
CDC1YDR182W RSM7P47150 247 aa8.53□□□□□ -1.04
CDC1YDR182W KAR2P16474 682 aaKnown RBP8.52□□□□□ -1.05
CDC1YDR182W GRX1P25373 110 aaKnown RBP8.52□□□□□ -1.05
CDC1YDR182W TOS1P38288 455 aa8.52□□□□□ -1.05
CDC1YDR182W PDS5Q04264 1277 aa8.52□□□□□ -1.05
CDC1YDR182W YBP2P53169 641 aa8.51□□□□□ -1.05
CDC1YDR182W HPC2Q01448 625 aa8.51□□□□□ -1.05
CDC1YDR182W HSP104P31539 908 aaKnown RBP8.51□□□□□ -1.05
CDC1YDR182W MAP2P38174 421 aaKnown RBP8.51□□□□□ -1.05
CDC1YDR182W MSN5P52918 1224 aa8.51□□□□□ -1.05
CDC1YDR182W UBP10P53874 792 aaPredicted RBP8.51□□□□□ -1.05
CDC1YDR182W YLR271WQ06152 274 aa8.51□□□□□ -1.05
CDC1YDR182W RIX7Q07844 837 aaKnown RBP8.51□□□□□ -1.05
CDC1YDR182W TUM1Q08686 304 aaKnown RBP8.51□□□□□ -1.05
CDC1YDR182W MHP1P43638 1398 aa8.5□□□□□ -1.05
CDC1YDR182W SAP155P43612 1002 aa8.5□□□□□ -1.05
CDC1YDR182W UTP22P53254 1237 aaPredicted RBP8.5□□□□□ -1.05
CDC1YDR182W NUP145P49687 1317 aa8.49□□□□□ -1.05
CDC1YDR182W DSD1P53095 428 aa8.48□□□□□ -1.05
CDC1YDR182W PAP2P53632 584 aaKnown RBP8.47□□□□□ -1.05
CDC1YDR182W NST1P53935 1240 aa8.47□□□□□ -1.05
CDC1YDR182W SCY1P53009 804 aa8.46□□□□□ -1.05
CDC1YDR182W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.46□□□□□ -1.05not detected
CDC1YDR182W TRK1P12685 1235 aa8.45□□□□□ -1.06
CDC1YDR182W POL5P39985 1022 aaKnown RBP8.45□□□□□ -1.06
CDC1YDR182W CTI6Q08923 506 aa8.45□□□□□ -1.06
CDC1YDR182W AKL1P38080 1108 aaKnown RBP8.45□□□□□ -1.06
CDC1YDR182W YER156CP40093 338 aaKnown RBP8.45□□□□□ -1.06
CDC1YDR182W CWH41P53008 833 aa8.44□□□□□ -1.06
CDC1YDR182W CTT1P06115 562 aa8.43□□□□□ -1.06
CDC1YDR182W BUD27P43573 796 aaKnown RBP RIP-Chip data8.43□□□□□ -1.06not detected
CDC1YDR182W SQS1P53866 767 aaKnown RBP8.43□□□□□ -1.06
CDC1YDR182W KIN4Q01919 800 aa8.43□□□□□ -1.06
CDC1YDR182W NYV1Q12255 253 aa8.43□□□□□ -1.06
CDC1YDR182W RRD1P40454 393 aaKnown RBP8.42□□□□□ -1.06
CDC1YDR182W RRT14P40470 206 aa8.41□□□□□ -1.06
CDC1YDR182W TEA1P47988 759 aa8.41□□□□□ -1.06
CDC1YDR182W CTF4Q01454 927 aa8.41□□□□□ -1.06
CDC1YDR182W RMT2Q03305 412 aa8.41□□□□□ -1.06
CDC1YDR182W ALE1Q08548 619 aa8.41□□□□□ -1.06
CDC1YDR182W UTP10P42945 1769 aaKnown RBP8.41□□□□□ -1.06
CDC1YDR182W AI2P03876 854 aa8.4□□□□□ -1.06
CDC1YDR182W YKL222CP35995 705 aa8.4□□□□□ -1.06
CDC1YDR182W ERT1P38140 529 aa8.4□□□□□ -1.06
CDC1YDR182W AOS1Q06624 347 aa8.4□□□□□ -1.06
CDC1YDR182W EPS1P40557 701 aa8.38□□□□□ -1.07
CDC1YDR182W SER1P33330 395 aaKnown RBP8.38□□□□□ -1.07
CDC1YDR182W NOP53Q12080 455 aaKnown RBP8.38□□□□□ -1.07
CDC1YDR182W KCC4P25389 1037 aa8.37□□□□□ -1.07
CDC1YDR182W NTH2P35172 780 aa8.37□□□□□ -1.07
CDC1YDR182W BBC1P47068 1157 aa8.37□□□□□ -1.07
CDC1YDR182W SMY1P32364 656 aaKnown RBP8.36□□□□□ -1.07
CDC1YDR182W YGL082WP53155 381 aa8.36□□□□□ -1.07
CDC1YDR182W PMD1P32634 1753 aa8.35□□□□□ -1.07
CDC1YDR182W LPD1P09624 499 aaKnown RBP8.35□□□□□ -1.07
CDC1YDR182W RRP46P53256 223 aaPredicted RBP8.35□□□□□ -1.07
CDC1YDR182W TOP1P04786 769 aa8.34□□□□□ -1.07
CDC1YDR182W SSA4P22202 642 aaKnown RBP8.33□□□□□ -1.08
CDC1YDR182W CAF20P12962 161 aaKnown RBP8.32□□□□□ -1.08
CDC1YDR182W PFF1P38244 976 aa8.32□□□□□ -1.08
CDC1YDR182W YFR016CP43597 1233 aaKnown RBP8.32□□□□□ -1.08
CDC1YDR182W PHM7Q12252 991 aa8.32□□□□□ -1.08
CDC1YDR182W PSD2P53037 1138 aaKnown RBP8.32□□□□□ -1.08
CDC1YDR182W MDG1P53885 366 aa8.32□□□□□ -1.08
CDC1YDR182W SLX5P32828 619 aaKnown RBP8.31□□□□□ -1.08
CDC1YDR182W UBP9P39967 754 aa8.31□□□□□ -1.08
CDC1YDR182W ICL1P28240 557 aaPredicted RBP8.3□□□□□ -1.08
CDC1YDR182W RAT1Q02792 1006 aaKnown RBP8.3□□□□□ -1.08
CDC1YDR182W IRC3Q06683 689 aa8.3□□□□□ -1.08
CDC1YDR182W BDF2Q07442 638 aa8.3□□□□□ -1.08
CDC1YDR182W SLI15P38283 698 aa8.29□□□□□ -1.08
CDC1YDR182W MGA2P40578 1113 aa8.29□□□□□ -1.08
CDC1YDR182W PUS5Q06244 254 aa8.29□□□□□ -1.08
CDC1YDR182W SSP2Q08646 371 aa8.29□□□□□ -1.08
CDC1YDR182W TOM1Q03280 3268 aa8.29□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms