RNA–Protein interactions for RNA: YDR054C

CDC34, Transcript of Ubiquitin-conjugating enzyme (E2), yeastyeast

Gene CDC34, Length 888 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC34YDR054C ENP1P38333 483 aaKnown RBP7.92□□□□□ -1.14
CDC34YDR054C AUS1Q08409 1394 aa7.92□□□□□ -1.14
CDC34YDR054C PRP43P53131 767 aaKnown RBP7.91□□□□□ -1.14
CDC34YDR054C SSA2P10592 639 aaKnown RBP7.9□□□□□ -1.14
CDC34YDR054C PDI1P17967 522 aaKnown RBP7.9□□□□□ -1.14
CDC34YDR054C COQ8P27697 501 aa7.9□□□□□ -1.14
CDC34YDR054C HIM1Q06674 414 aa7.9□□□□□ -1.14
CDC34YDR054C PKC1P24583 1151 aa7.89□□□□□ -1.15
CDC34YDR054C GAS4Q08271 471 aa7.89□□□□□ -1.15
CDC34YDR054C PRP45P28004 379 aaPredicted RBP7.88□□□□□ -1.15
CDC34YDR054C BIM1P40013 344 aa7.88□□□□□ -1.15
CDC34YDR054C RPL34BP40525 121 aaKnown RBP7.88□□□□□ -1.15
CDC34YDR054C RPL34AP87262 121 aaPredicted RBP7.88□□□□□ -1.15
CDC34YDR054C TAP42Q04372 366 aa7.88□□□□□ -1.15
CDC34YDR054C NOP53Q12080 455 aaKnown RBP7.88□□□□□ -1.15
CDC34YDR054C KAR2P16474 682 aaKnown RBP7.87□□□□□ -1.15
CDC34YDR054C YJL007CP47080 104 aa7.87□□□□□ -1.15
CDC34YDR054C RTF1P53064 558 aa7.87□□□□□ -1.15
CDC34YDR054C DPS1P04802 557 aaKnown RBP7.86□□□□□ -1.15
CDC34YDR054C COX6P00427 148 aa7.85□□□□□ -1.15
CDC34YDR054C PRP5P21372 849 aaPredicted RBP7.85□□□□□ -1.15
CDC34YDR054C MSB3P48566 633 aaPredicted RBP7.85□□□□□ -1.15
CDC34YDR054C GRX4P32642 244 aa7.84□□□□□ -1.15
CDC34YDR054C ATG32P40458 529 aa7.84□□□□□ -1.15
CDC34YDR054C RRP46P53256 223 aaPredicted RBP7.84□□□□□ -1.15
CDC34YDR054C APP1P53933 587 aa7.84□□□□□ -1.15
CDC34YDR054C CDC3P32457 520 aaKnown RBP7.83□□□□□ -1.16
CDC34YDR054C PAM1P37304 830 aaKnown RBP7.83□□□□□ -1.16
CDC34YDR054C ENT1Q12518 454 aa7.83□□□□□ -1.16
CDC34YDR054C TOP1P04786 769 aa7.82□□□□□ -1.16
CDC34YDR054C GLN1P32288 370 aaKnown RBP7.82□□□□□ -1.16
CDC34YDR054C BCH2P36122 765 aa7.82□□□□□ -1.16
CDC34YDR054C PAP2P53632 584 aaKnown RBP7.82□□□□□ -1.16
CDC34YDR054C HEM3P28789 327 aa7.81□□□□□ -1.16
CDC34YDR054C RRN6P32786 894 aa7.81□□□□□ -1.16
CDC34YDR054C PRS1P32895 427 aaKnown RBP7.81□□□□□ -1.16
CDC34YDR054C SLM3Q12093 417 aa7.81□□□□□ -1.16
CDC34YDR054C TY4B-HP0C2J7 1802 aa7.8□□□□□ -1.16
CDC34YDR054C TY4B-JP47024 1803 aa7.8□□□□□ -1.16
CDC34YDR054C YRF1-2P40105 1681 aa7.8□□□□□ -1.16
CDC34YDR054C MAP2P38174 421 aaKnown RBP7.8□□□□□ -1.16
CDC34YDR054C EPS1P40557 701 aa7.8□□□□□ -1.16
CDC34YDR054C MLP1Q02455 1875 aaKnown RBP7.8□□□□□ -1.16
CDC34YDR054C SSF1P38789 453 aaPredicted RBP7.79□□□□□ -1.16
CDC34YDR054C BUB1P41695 1021 aaKnown RBP RIP-Chip data7.79□□□□□ -1.16not detected
CDC34YDR054C CSN12P47130 423 aa7.79□□□□□ -1.16
CDC34YDR054C YDL144CQ07589 356 aa7.79□□□□□ -1.16
CDC34YDR054C ENV9Q08651 330 aa7.79□□□□□ -1.16
CDC34YDR054C RPO41P13433 1351 aaKnown RBP7.79□□□□□ -1.16
CDC34YDR054C MPP10P47083 593 aaKnown RBP7.78□□□□□ -1.16
CDC34YDR054C TCB1Q12466 1186 aa7.78□□□□□ -1.16
CDC34YDR054C RRP5Q05022 1729 aaKnown RBP7.78□□□□□ -1.16
CDC34YDR054C BRN1P38170 754 aa7.77□□□□□ -1.17
CDC34YDR054C RTR1P40084 226 aaPredicted RBP7.77□□□□□ -1.17
CDC34YDR054C UBP10P53874 792 aaPredicted RBP7.77□□□□□ -1.17
CDC34YDR054C TIF1P10081 395 aaKnown RBP7.76□□□□□ -1.17
CDC34YDR054C XKS1P42826 600 aa7.76□□□□□ -1.17
CDC34YDR054C RSF2P46974 1380 aa7.75□□□□□ -1.17
CDC34YDR054C YRF1-4O13559 1382 aa7.74□□□□□ -1.17
CDC34YDR054C PRD1P25375 712 aa7.74□□□□□ -1.17
CDC34YDR054C AKL1P38080 1108 aaKnown RBP7.74□□□□□ -1.17
CDC34YDR054C UBP14P38237 781 aaKnown RBP7.74□□□□□ -1.17
CDC34YDR054C SEN54Q02825 467 aaPredicted RBP7.74□□□□□ -1.17
CDC34YDR054C THI22Q06490 572 aa7.74□□□□□ -1.17
CDC34YDR054C YPR204WQ08995 1032 aa7.74□□□□□ -1.17
CDC34YDR054C ERG12P07277 443 aa7.73□□□□□ -1.17
CDC34YDR054C TTI1P36097 1038 aa7.73□□□□□ -1.17
CDC34YDR054C DSD1P53095 428 aa7.73□□□□□ -1.17
CDC34YDR054C IMH1Q06704 911 aaKnown RBP7.73□□□□□ -1.17
CDC34YDR054C YIL177CP40434 1758 aa7.73□□□□□ -1.17
CDC34YDR054C YJL225CP40889 1758 aa7.73□□□□□ -1.17
CDC34YDR054C RPP0P05317 312 aaKnown RBP7.72□□□□□ -1.17
CDC34YDR054C SUI2P20459 304 aaKnown RBP7.72□□□□□ -1.17
CDC34YDR054C SNF2P22082 1703 aa7.72□□□□□ -1.17
CDC34YDR054C ASF1P32447 279 aa7.71□□□□□ -1.18
CDC34YDR054C YBL036CP38197 257 aa7.71□□□□□ -1.18
CDC34YDR054C SIR4P11978 1358 aa7.71□□□□□ -1.18
CDC34YDR054C TPD3P31383 635 aa7.7□□□□□ -1.18
CDC34YDR054C HSP104P31539 908 aaKnown RBP7.7□□□□□ -1.18
CDC34YDR054C VPS29P38759 282 aa7.7□□□□□ -1.18
CDC34YDR054C FUN12P39730 1002 aaKnown RBP7.7□□□□□ -1.18
CDC34YDR054C VPS27P40343 622 aaKnown RBP7.7□□□□□ -1.18
CDC34YDR054C SAP155P43612 1002 aa7.7□□□□□ -1.18
CDC34YDR054C RTT109Q07794 436 aa7.7□□□□□ -1.18
CDC34YDR054C CDC45Q08032 650 aa7.7□□□□□ -1.18
CDC34YDR054C NOB1Q08444 459 aaKnown RBP7.7□□□□□ -1.18
CDC34YDR054C RVB2Q12464 471 aaKnown RBP7.7□□□□□ -1.18
CDC34YDR054C RTG2P32608 588 aaKnown RBP7.69□□□□□ -1.18
CDC34YDR054C NTH2P35172 780 aa7.69□□□□□ -1.18
CDC34YDR054C BDF1P35817 686 aa7.69□□□□□ -1.18
CDC34YDR054C EDS1P38073 919 aa7.69□□□□□ -1.18
CDC34YDR054C HEF3P53978 1044 aaKnown RBP7.69□□□□□ -1.18
CDC34YDR054C HAT1Q12341 374 aa7.69□□□□□ -1.18
CDC34YDR054C ADE16P54113 591 aaKnown RBP7.68□□□□□ -1.18
CDC34YDR054C APC1P53886 1748 aa7.67□□□□□ -1.18
CDC34YDR054C YKL133CP36066 463 aa7.67□□□□□ -1.18
CDC34YDR054C INP54Q08227 384 aaKnown RBP7.67□□□□□ -1.18
CDC34YDR054C PSE1P32337 1089 aaKnown RBP7.66□□□□□ -1.18
CDC34YDR054C DOS2P54858 310 aa7.66□□□□□ -1.18
CDC34YDR054C URB1P34241 1764 aaKnown RBP7.66□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 9 ms