RNA–Protein interactions for RNA: YBR273C

UBX7, Transcript of UBX (ubiquitin regulatory X) domain-containing protein, yeast

Gene UBX7, Length 1,311 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBX7	YBR273C	EAF7	P53911	425 aa	Known RBP	6.06	□□□□□ -1.44
UBX7	YBR273C	OPY1	P38271	328 aa		6.05	□□□□□ -1.44
UBX7	YBR273C	USO1	P25386	1790 aa		6.05	□□□□□ -1.44
UBX7	YBR273C	PRD1	P25375	712 aa		6.04	□□□□□ -1.44
UBX7	YBR273C	SAP155	P43612	1002 aa		6.04	□□□□□ -1.44
UBX7	YBR273C	YMR1	P47147	688 aa	Known RBP RIP-Chip data	6.04	□□□□□ -1.44	not detected
UBX7	YBR273C	RTF1	P53064	558 aa		6.04	□□□□□ -1.44
UBX7	YBR273C	RRP46	P53256	223 aa	Predicted RBP	6.04	□□□□□ -1.44
UBX7	YBR273C	MAK21	Q12176	1025 aa	Known RBP	6.04	□□□□□ -1.44
UBX7	YBR273C	LEU2	P04173	364 aa	Predicted RBP	6.03	□□□□□ -1.44
UBX7	YBR273C	CLC1	P17891	233 aa		6.03	□□□□□ -1.44
UBX7	YBR273C	MTR4	P47047	1073 aa	Known RBP	6.03	□□□□□ -1.44
UBX7	YBR273C	RCM1	P53972	490 aa		6.02	□□□□□ -1.45
UBX7	YBR273C	SAM3	Q08986	587 aa		6.02	□□□□□ -1.45
UBX7	YBR273C	TPD3	P31383	635 aa		6.01	□□□□□ -1.45
UBX7	YBR273C	YIL092W	P40497	633 aa		6.01	□□□□□ -1.45
UBX7	YBR273C	YFR016C	P43597	1233 aa	Known RBP	6.01	□□□□□ -1.45
UBX7	YBR273C	HEF3	P53978	1044 aa	Known RBP	6.01	□□□□□ -1.45
UBX7	YBR273C	THI22	Q06490	572 aa		6.01	□□□□□ -1.45
UBX7	YBR273C	RPO41	P13433	1351 aa	Known RBP	6.01	□□□□□ -1.45
UBX7	YBR273C	AUS1	Q08409	1394 aa		6.01	□□□□□ -1.45
UBX7	YBR273C	DBP1	P24784	617 aa	Known RBP	6	□□□□□ -1.45
UBX7	YBR273C	PPH3	P32345	308 aa		6	□□□□□ -1.45
UBX7	YBR273C	TFG1	P41895	735 aa	Predicted RBP	6	□□□□□ -1.45
UBX7	YBR273C	PAP2	P53632	584 aa	Known RBP	6	□□□□□ -1.45
UBX7	YBR273C	RIA1	P53893	1110 aa		6	□□□□□ -1.45
UBX7	YBR273C	APC1	P53886	1748 aa		6	□□□□□ -1.45
UBX7	YBR273C	VMA1	P17255	1071 aa	Known RBP	5.99	□□□□□ -1.45
UBX7	YBR273C	CPS1	P27614	576 aa		5.99	□□□□□ -1.45
UBX7	YBR273C	VPS29	P38759	282 aa		5.99	□□□□□ -1.45
UBX7	YBR273C	TY1B-NL2	Q99337	1749 aa	Known RBP	5.99	□□□□□ -1.45
UBX7	YBR273C	SNF7	P39929	240 aa	Known RBP	5.99	□□□□□ -1.45
UBX7	YBR273C	ECM16	Q04217	1267 aa	Known RBP	5.99	□□□□□ -1.45
UBX7	YBR273C	DAL5	P15365	543 aa		5.98	□□□□□ -1.45
UBX7	YBR273C	POL32	P47110	350 aa		5.98	□□□□□ -1.45
UBX7	YBR273C	PRP43	P53131	767 aa	Known RBP	5.98	□□□□□ -1.45
UBX7	YBR273C	JIP4	Q03361	876 aa		5.98	□□□□□ -1.45
UBX7	YBR273C	HIM1	Q06674	414 aa		5.98	□□□□□ -1.45
UBX7	YBR273C	BCK2	P33306	851 aa		5.97	□□□□□ -1.45
UBX7	YBR273C	DAN4	P47179	1161 aa		5.97	□□□□□ -1.45
UBX7	YBR273C	RTT109	Q07794	436 aa		5.97	□□□□□ -1.45
UBX7	YBR273C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	5.97	□□□□□ -1.45	not detected
UBX7	YBR273C	ADE6	P38972	1358 aa	Known RBP	5.96	□□□□□ -1.46
UBX7	YBR273C	CHL1	P22516	861 aa	Predicted RBP	5.96	□□□□□ -1.46
UBX7	YBR273C	YNR029C	P53729	429 aa	Known RBP	5.96	□□□□□ -1.46
UBX7	YBR273C	PCT1	P13259	424 aa		5.95	□□□□□ -1.46
UBX7	YBR273C	CSE4	P36012	229 aa		5.95	□□□□□ -1.46
UBX7	YBR273C	MAK10	Q02197	733 aa		5.95	□□□□□ -1.46
UBX7	YBR273C	ROX1	P25042	368 aa		5.94	□□□□□ -1.46
UBX7	YBR273C	VPS24	P36095	224 aa	Known RBP	5.94	□□□□□ -1.46
UBX7	YBR273C	STS1	P38637	319 aa		5.94	□□□□□ -1.46
UBX7	YBR273C	YPR148C	Q06523	435 aa		5.94	□□□□□ -1.46
UBX7	YBR273C	YDL129W	Q07555	291 aa		5.94	□□□□□ -1.46
UBX7	YBR273C	EDE1	P34216	1381 aa		5.93	□□□□□ -1.46
UBX7	YBR273C	CAB3	P36076	571 aa		5.93	□□□□□ -1.46
UBX7	YBR273C	AKL1	P38080	1108 aa	Known RBP	5.93	□□□□□ -1.46
UBX7	YBR273C	SAP30	P38429	201 aa		5.93	□□□□□ -1.46
UBX7	YBR273C	SSP1	P38871	571 aa		5.93	□□□□□ -1.46
UBX7	YBR273C	MAM1	P40065	302 aa		5.93	□□□□□ -1.46
UBX7	YBR273C	YFR006W	P43590	535 aa		5.93	□□□□□ -1.46
UBX7	YBR273C	GYP7	P48365	746 aa		5.93	□□□□□ -1.46
UBX7	YBR273C	YNL050C	P53952	270 aa		5.93	□□□□□ -1.46
UBX7	YBR273C	PUF6	Q04373	656 aa	Known RBP	5.93	□□□□□ -1.46
UBX7	YBR273C	LSP1	Q12230	341 aa	Known RBP	5.93	□□□□□ -1.46
UBX7	YBR273C	YRF1-2	P40105	1681 aa		5.93	□□□□□ -1.46
UBX7	YBR273C	DPS1	P04802	557 aa	Known RBP	5.91	□□□□□ -1.46
UBX7	YBR273C	RPS24A	P0CX31	135 aa	Known RBP	5.91	□□□□□ -1.46
UBX7	YBR273C	RPS24B	P0CX32	135 aa	Known RBP	5.91	□□□□□ -1.46
UBX7	YBR273C	PRE3	P38624	215 aa		5.91	□□□□□ -1.46
UBX7	YBR273C	GAS4	Q08271	471 aa		5.91	□□□□□ -1.46
UBX7	YBR273C	ZDS1	P50111	915 aa	Known RBP	5.9	□□□□□ -1.47
UBX7	YBR273C	DSD1	P53095	428 aa		5.9	□□□□□ -1.47
UBX7	YBR273C	TY4B-H	P0C2J7	1802 aa		5.89	□□□□□ -1.47
UBX7	YBR273C	YPP1	P46951	817 aa		5.89	□□□□□ -1.47
UBX7	YBR273C	TY4B-J	P47024	1803 aa		5.89	□□□□□ -1.47
UBX7	YBR273C	RAD50	P12753	1312 aa		5.88	□□□□□ -1.47
UBX7	YBR273C	NTH2	P35172	780 aa		5.88	□□□□□ -1.47
UBX7	YBR273C	CTF4	Q01454	927 aa		5.88	□□□□□ -1.47
UBX7	YBR273C	GYP5	Q12344	894 aa		5.88	□□□□□ -1.47
UBX7	YBR273C	RRP5	Q05022	1729 aa	Known RBP	5.87	□□□□□ -1.47
UBX7	YBR273C	LYS2	P07702	1392 aa		5.87	□□□□□ -1.47
UBX7	YBR273C	MSP1	P28737	362 aa		5.87	□□□□□ -1.47
UBX7	YBR273C	PTC4	P38089	393 aa		5.87	□□□□□ -1.47
UBX7	YBR273C	RRT14	P40470	206 aa		5.87	□□□□□ -1.47
UBX7	YBR273C	MGA2	P40578	1113 aa		5.87	□□□□□ -1.47
UBX7	YBR273C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	5.87	□□□□□ -1.47	not detected
UBX7	YBR273C	SRT1	Q03175	343 aa		5.87	□□□□□ -1.47
UBX7	YBR273C	HTA1	P04911	132 aa	Known RBP	5.86	□□□□□ -1.47
UBX7	YBR273C	HTA2	P04912	132 aa		5.86	□□□□□ -1.47
UBX7	YBR273C	RPS19A	P07280	144 aa	Known RBP	5.86	□□□□□ -1.47
UBX7	YBR273C	RPS19B	P07281	144 aa	Predicted RBP	5.86	□□□□□ -1.47
UBX7	YBR273C	MNN4	P36044	1178 aa		5.86	□□□□□ -1.47
UBX7	YBR273C	YNG2	P38806	282 aa	Known RBP	5.86	□□□□□ -1.47
UBX7	YBR273C	YMR196W	Q04336	1088 aa		5.86	□□□□□ -1.47
UBX7	YBR273C	CST9	Q06032	482 aa		5.86	□□□□□ -1.47
UBX7	YBR273C	AOS1	Q06624	347 aa		5.86	□□□□□ -1.47
UBX7	YBR273C	FKS3	Q04952	1785 aa		5.85	□□□□□ -1.47
UBX7	YBR273C	SLN1	P39928	1220 aa	Predicted RBP	5.85	□□□□□ -1.47
UBX7	YBR273C	HGH1	P48362	394 aa	Known RBP	5.85	□□□□□ -1.47
UBX7	YBR273C	ITC1	P53125	1264 aa		5.85	□□□□□ -1.47

Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms