RNA–Protein interactions for RNA: YBR265W

TSC10, Transcript of 3-ketosphinganine reductase, yeastyeast

Gene TSC10, Length 963 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TSC10YBR265W TRK1P12685 1235 aa12.56□□□□□ -0.4
TSC10YBR265W DSD1P53095 428 aa12.56□□□□□ -0.4
TSC10YBR265W NST1P53935 1240 aa12.56□□□□□ -0.4
TSC10YBR265W CTF4Q01454 927 aa12.56□□□□□ -0.4
TSC10YBR265W SPT7P35177 1332 aa12.56□□□□□ -0.4
TSC10YBR265W HSP104P31539 908 aaKnown RBP12.55□□□□□ -0.4
TSC10YBR265W PSD2P53037 1138 aaKnown RBP12.55□□□□□ -0.4
TSC10YBR265W INP54Q08227 384 aaKnown RBP12.55□□□□□ -0.4
TSC10YBR265W RIM15P43565 1770 aa12.55□□□□□ -0.4
TSC10YBR265W MSB4Q12317 492 aa12.54□□□□□ -0.4
TSC10YBR265W AKL1P38080 1108 aaKnown RBP12.53□□□□□ -0.4
TSC10YBR265W OSM1P21375 501 aaKnown RBP12.52□□□□□ -0.41
TSC10YBR265W GRX1P25373 110 aaKnown RBP12.5□□□□□ -0.41
TSC10YBR265W BDF1P35817 686 aa12.5□□□□□ -0.41
TSC10YBR265W CTH1P47976 325 aa12.5□□□□□ -0.41
TSC10YBR265W YBP2P53169 641 aa12.5□□□□□ -0.41
TSC10YBR265W AOS1Q06624 347 aa12.49□□□□□ -0.41
TSC10YBR265W PRY3P47033 881 aa12.48□□□□□ -0.41
TSC10YBR265W NUP145P49687 1317 aa12.47□□□□□ -0.41
TSC10YBR265W RAD4P14736 754 aa12.46□□□□□ -0.41
TSC10YBR265W ALD3P54114 506 aa12.46□□□□□ -0.41
TSC10YBR265W BUG1Q12191 341 aa12.46□□□□□ -0.41
TSC10YBR265W GRE2Q12068 342 aaKnown RBP12.43□□□□□ -0.42
TSC10YBR265W KCC4P25389 1037 aa12.42□□□□□ -0.42
TSC10YBR265W RTR1P40084 226 aaPredicted RBP12.42□□□□□ -0.42
TSC10YBR265W IOC4Q04213 475 aa12.42□□□□□ -0.42
TSC10YBR265W NTH2P35172 780 aa12.41□□□□□ -0.42
TSC10YBR265W RRP46P53256 223 aaPredicted RBP12.41□□□□□ -0.42
TSC10YBR265W UTP22P53254 1237 aaPredicted RBP12.4□□□□□ -0.42
TSC10YBR265W RMT2Q03305 412 aa12.4□□□□□ -0.42
TSC10YBR265W TSR3Q12094 313 aaKnown RBP12.4□□□□□ -0.42
TSC10YBR265W UGA3P26370 528 aa12.36□□□□□ -0.43
TSC10YBR265W YNL050CP53952 270 aa12.36□□□□□ -0.43
TSC10YBR265W TUM1Q08686 304 aaKnown RBP12.36□□□□□ -0.43
TSC10YBR265W PRD1P25375 712 aa12.35□□□□□ -0.43
TSC10YBR265W MDG1P53885 366 aa12.35□□□□□ -0.43
TSC10YBR265W NSE3Q05541 303 aa12.35□□□□□ -0.43
TSC10YBR265W HPC2Q01448 625 aa12.34□□□□□ -0.43
TSC10YBR265W ALE1Q08548 619 aa12.34□□□□□ -0.43
TSC10YBR265W NOP53Q12080 455 aaKnown RBP12.33□□□□□ -0.44
TSC10YBR265W SAP155P43612 1002 aa12.32□□□□□ -0.44
TSC10YBR265W TOS1P38288 455 aa12.31□□□□□ -0.44
TSC10YBR265W ZDS1P50111 915 aaKnown RBP12.31□□□□□ -0.44
TSC10YBR265W TEA1P47988 759 aa12.3□□□□□ -0.44
TSC10YBR265W MAM1P40065 302 aa12.29□□□□□ -0.44
TSC10YBR265W RRT14P40470 206 aa12.29□□□□□ -0.44
TSC10YBR265W BUD27P43573 796 aaKnown RBP RIP-Chip data12.29□□□□□ -0.44not detected
TSC10YBR265W MPP10P47083 593 aaKnown RBP12.28□□□□□ -0.44
TSC10YBR265W SSP2Q08646 371 aa12.28□□□□□ -0.44
TSC10YBR265W PHM7Q12252 991 aa12.28□□□□□ -0.44
TSC10YBR265W NYV1Q12255 253 aa12.28□□□□□ -0.44
TSC10YBR265W SSA1P10591 642 aaKnown RBP12.27□□□□□ -0.45
TSC10YBR265W YDL144CQ07589 356 aa12.27□□□□□ -0.45
TSC10YBR265W LYS2P07702 1392 aa12.27□□□□□ -0.45
TSC10YBR265W SER1P33330 395 aaKnown RBP12.26□□□□□ -0.45
TSC10YBR265W YFR016CP43597 1233 aaKnown RBP12.26□□□□□ -0.45
TSC10YBR265W THI22Q06490 572 aa12.25□□□□□ -0.45
TSC10YBR265W MSN5P52918 1224 aa12.24□□□□□ -0.45
TSC10YBR265W RIX7Q07844 837 aaKnown RBP12.24□□□□□ -0.45
TSC10YBR265W UTP10P42945 1769 aaKnown RBP12.23□□□□□ -0.45
TSC10YBR265W BMS1Q08965 1183 aaKnown RBP12.23□□□□□ -0.45
TSC10YBR265W LPD1P09624 499 aaKnown RBP12.22□□□□□ -0.45
TSC10YBR265W GYP7P48365 746 aa12.22□□□□□ -0.45
TSC10YBR265W RTT109Q07794 436 aa12.22□□□□□ -0.45
TSC10YBR265W CTI6Q08923 506 aa12.22□□□□□ -0.45
TSC10YBR265W EAF6P47128 113 aa12.21□□□□□ -0.45
TSC10YBR265W YGL082WP53155 381 aa12.21□□□□□ -0.45
TSC10YBR265W COQ4O13525 335 aa12.2□□□□□ -0.46
TSC10YBR265W SPT21P35209 758 aa12.2□□□□□ -0.46
TSC10YBR265W YBR287WP38355 427 aa12.2□□□□□ -0.46
TSC10YBR265W RAT1Q02792 1006 aaKnown RBP12.2□□□□□ -0.46
TSC10YBR265W RPP0P05317 312 aaKnown RBP12.19□□□□□ -0.46
TSC10YBR265W CTT1P06115 562 aa12.19□□□□□ -0.46
TSC10YBR265W TPD3P31383 635 aa12.19□□□□□ -0.46
TSC10YBR265W YKL222CP35995 705 aa12.19□□□□□ -0.46
TSC10YBR265W YER156CP40093 338 aaKnown RBP12.16□□□□□ -0.46
TSC10YBR265W HEF3P53978 1044 aaKnown RBP12.16□□□□□ -0.46
TSC10YBR265W VPS64Q03944 604 aa12.16□□□□□ -0.46
TSC10YBR265W DIB1Q06819 143 aaPredicted RBP12.16□□□□□ -0.46
TSC10YBR265W ERT1P38140 529 aa12.15□□□□□ -0.46
TSC10YBR265W YOL057WQ08225 711 aa12.15□□□□□ -0.46
TSC10YBR265W ARG8P18544 423 aa12.14□□□□□ -0.47
TSC10YBR265W PFF1P38244 976 aa12.14□□□□□ -0.47
TSC10YBR265W VPS27P40343 622 aaKnown RBP12.13□□□□□ -0.47
TSC10YBR265W CWH41P53008 833 aa12.13□□□□□ -0.47
TSC10YBR265W ZDS2P54786 942 aa12.13□□□□□ -0.47
TSC10YBR265W IRC3Q06683 689 aa12.13□□□□□ -0.47
TSC10YBR265W APL2P36000 726 aaPredicted RBP12.12□□□□□ -0.47
TSC10YBR265W DNM1P54861 757 aa12.12□□□□□ -0.47
TSC10YBR265W BDF2Q07442 638 aa12.12□□□□□ -0.47
TSC10YBR265W YPR204WQ08995 1032 aa12.12□□□□□ -0.47
TSC10YBR265W SRT1Q03175 343 aa12.11□□□□□ -0.47
TSC10YBR265W PKH1Q03407 766 aa12.1□□□□□ -0.47
TSC10YBR265W CDC45Q08032 650 aa12.1□□□□□ -0.47
TSC10YBR265W HAT1Q12341 374 aa12.09□□□□□ -0.47
TSC10YBR265W DCD1P06773 312 aa12.08□□□□□ -0.48
TSC10YBR265W SUI2P20459 304 aaKnown RBP12.08□□□□□ -0.48
TSC10YBR265W YLR271WQ06152 274 aa12.08□□□□□ -0.48
TSC10YBR265W SSK22P25390 1331 aaPredicted RBP12.08□□□□□ -0.48
TSC10YBR265W SMY1P32364 656 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 5,963 RNA–protein pairs in 46.5 ms