RNA–Protein interactions for RNA: YBR260C

RGD1, Transcript of GTPase-activating protein (RhoGAP) for Rho3p and Rho4p, yeastyeast

Gene RGD1, Length 2,001 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RGD1YBR260C VPS20Q04272 221 aa7.1□□□□□ -1.27
RGD1YBR260C APC11Q12157 165 aa7.1□□□□□ -1.27
RGD1YBR260C VPS72Q03388 795 aa7.09□□□□□ -1.27
RGD1YBR260C DOP1Q03921 1698 aa7.09□□□□□ -1.27
RGD1YBR260C SPT5P27692 1063 aaKnown RBP7.08□□□□□ -1.28
RGD1YBR260C DLD1P32891 587 aa7.08□□□□□ -1.28
RGD1YBR260C RRP46P53256 223 aaPredicted RBP7.08□□□□□ -1.28
RGD1YBR260C YKL068W-AQ3E826 78 aa7.08□□□□□ -1.28
RGD1YBR260C TY1B-HO13535 1793 aa7.08□□□□□ -1.28
RGD1YBR260C TY1B-DR5P0C2I2 1755 aa7.08□□□□□ -1.28
RGD1YBR260C TY1B-DR6P0C2I3 1755 aa7.08□□□□□ -1.28
RGD1YBR260C TY1B-LR2P0C2I5 1755 aa7.08□□□□□ -1.28
RGD1YBR260C TY1B-LR3P0C2I6 1755 aaKnown RBP7.08□□□□□ -1.28
RGD1YBR260C TY1B-PR1P0C2I9 1755 aaKnown RBP7.08□□□□□ -1.28
RGD1YBR260C TY1B-PR2P0C2J0 1756 aa7.08□□□□□ -1.28
RGD1YBR260C TY1B-PR3P0C2J1 1755 aaKnown RBP7.08□□□□□ -1.28
RGD1YBR260C TY1B-JR1P47098 1755 aa7.08□□□□□ -1.28
RGD1YBR260C TY1B-ML2Q03434 1755 aaKnown RBP7.08□□□□□ -1.28
RGD1YBR260C TY1B-ER1Q03612 1755 aa7.08□□□□□ -1.28
RGD1YBR260C TY1B-ML1Q04711 1755 aaKnown RBP7.08□□□□□ -1.28
RGD1YBR260C TY1B-GR2Q12269 1755 aa7.08□□□□□ -1.28
RGD1YBR260C TY1B-OLQ12273 1755 aa7.08□□□□□ -1.28
RGD1YBR260C TY1B-PLQ12414 1755 aaKnown RBP7.08□□□□□ -1.28
RGD1YBR260C LTE1P07866 1435 aa7.08□□□□□ -1.28
RGD1YBR260C MSH1P25846 959 aa7.08□□□□□ -1.28
RGD1YBR260C SWI3P32591 825 aa7.08□□□□□ -1.28
RGD1YBR260C CSE4P36012 229 aa7.08□□□□□ -1.28
RGD1YBR260C BUD27P43573 796 aaKnown RBP RIP-Chip data7.08□□□□□ -1.28not detected
RGD1YBR260C BDP1P46678 594 aa7.08□□□□□ -1.28
RGD1YBR260C PUS1Q12211 544 aaKnown RBP7.08□□□□□ -1.28
RGD1YBR260C YMR1P47147 688 aaKnown RBP RIP-Chip data7.07□□□□□ -1.28not detected
RGD1YBR260C CWH41P53008 833 aa7.07□□□□□ -1.28
RGD1YBR260C CDC25P04821 1589 aa7.07□□□□□ -1.28
RGD1YBR260C CBF5P33322 483 aaKnown RBP RIP-Chip data7.06□□□□□ -1.28not detected
RGD1YBR260C RTR1P40084 226 aaPredicted RBP7.06□□□□□ -1.28
RGD1YBR260C HRQ1Q05549 1077 aa7.06□□□□□ -1.28
RGD1YBR260C MLP1Q02455 1875 aaKnown RBP7.06□□□□□ -1.28
RGD1YBR260C BUD3P25558 1636 aa7.06□□□□□ -1.28
RGD1YBR260C HST1P53685 503 aa7.06□□□□□ -1.28
RGD1YBR260C GYL1Q04322 720 aa7.06□□□□□ -1.28
RGD1YBR260C MSB4Q12317 492 aa7.06□□□□□ -1.28
RGD1YBR260C MRPL10P36520 322 aa7.05□□□□□ -1.28
RGD1YBR260C SES1P07284 462 aaKnown RBP7.05□□□□□ -1.28
RGD1YBR260C PUP2P32379 260 aa7.05□□□□□ -1.28
RGD1YBR260C ILV3P39522 585 aaKnown RBP7.05□□□□□ -1.28
RGD1YBR260C RSM25P40496 264 aa7.05□□□□□ -1.28
RGD1YBR260C AAD16Q02895 342 aa7.05□□□□□ -1.28
RGD1YBR260C THI22Q06490 572 aa7.05□□□□□ -1.28
RGD1YBR260C MGA2P40578 1113 aa7.04□□□□□ -1.28
RGD1YBR260C HOT1Q03213 719 aa7.04□□□□□ -1.28
RGD1YBR260C PRI1P10363 409 aa7.03□□□□□ -1.28
RGD1YBR260C BRN1P38170 754 aa7.03□□□□□ -1.28
RGD1YBR260C HXT13P39924 564 aa7.03□□□□□ -1.28
RGD1YBR260C YPL225WQ08971 146 aaKnown RBP7.03□□□□□ -1.28
RGD1YBR260C SEC39Q12745 709 aa7.03□□□□□ -1.28
RGD1YBR260C YOR093CQ12275 1648 aa7.03□□□□□ -1.28
RGD1YBR260C DRS2P39524 1355 aa7.03□□□□□ -1.28
RGD1YBR260C KEX1P09620 729 aa7.03□□□□□ -1.28
RGD1YBR260C MPE1P35728 441 aaKnown RBP7.03□□□□□ -1.28
RGD1YBR260C RRP14P36080 434 aaKnown RBP7.03□□□□□ -1.28
RGD1YBR260C NKP2Q06162 153 aa7.03□□□□□ -1.28
RGD1YBR260C MDM38Q08179 573 aa7.03□□□□□ -1.28
RGD1YBR260C RTC1Q08281 1341 aa7.02□□□□□ -1.29
RGD1YBR260C BIK1P11709 440 aa7.02□□□□□ -1.29
RGD1YBR260C SPE2P21182 396 aa7.02□□□□□ -1.29
RGD1YBR260C DSF2P38213 736 aa7.02□□□□□ -1.29
RGD1YBR260C HEF3P53978 1044 aaKnown RBP7.02□□□□□ -1.29
RGD1YBR260C CTI6Q08923 506 aa7.02□□□□□ -1.29
RGD1YBR260C SPO14P36126 1683 aa7.02□□□□□ -1.29
RGD1YBR260C MRC1P25588 1096 aa7.01□□□□□ -1.29
RGD1YBR260C ESL2P36168 1195 aa7.01□□□□□ -1.29
RGD1YBR260C VPS30Q02948 557 aa7.01□□□□□ -1.29
RGD1YBR260C YSH1Q06224 779 aaPredicted RBP7.01□□□□□ -1.29
RGD1YBR260C PDR11P40550 1411 aa7.01□□□□□ -1.29
RGD1YBR260C KRE5P22023 1365 aa7.01□□□□□ -1.29
RGD1YBR260C TY1B-JR2P47100 1755 aaKnown RBP7.01□□□□□ -1.29
RGD1YBR260C TY1B-ER2Q03619 1755 aa7.01□□□□□ -1.29
RGD1YBR260C TY1B-MR1Q04214 1755 aa7.01□□□□□ -1.29
RGD1YBR260C TY1B-MR2Q04670 1755 aaKnown RBP7.01□□□□□ -1.29
RGD1YBR260C TY1B-LR1Q12088 1755 aaKnown RBP7.01□□□□□ -1.29
RGD1YBR260C TY1B-NL1Q12112 1755 aa7.01□□□□□ -1.29
RGD1YBR260C TY1B-GR1Q12141 1755 aa7.01□□□□□ -1.29
RGD1YBR260C TY1B-BRQ12193 1756 aa7.01□□□□□ -1.29
RGD1YBR260C TY1B-GR3Q12316 1755 aa7.01□□□□□ -1.29
RGD1YBR260C TY1B-BLQ12490 1755 aa7.01□□□□□ -1.29
RGD1YBR260C TY1B-ORQ92393 1755 aa7.01□□□□□ -1.29
RGD1YBR260C RAD50P12753 1312 aa7.01□□□□□ -1.29
RGD1YBR260C RAD3P06839 778 aa7.01□□□□□ -1.29
RGD1YBR260C HXT17P53631 564 aa7.01□□□□□ -1.29
RGD1YBR260C GCR2Q01722 534 aa7.01□□□□□ -1.29
RGD1YBR260C SLP1Q12232 587 aa7.01□□□□□ -1.29
RGD1YBR260C TRP5P00931 707 aaKnown RBP7□□□□□ -1.29
RGD1YBR260C TOP1P04786 769 aa7□□□□□ -1.29
RGD1YBR260C SLD2P34252 453 aa7□□□□□ -1.29
RGD1YBR260C SRC1Q03707 834 aa7□□□□□ -1.29
RGD1YBR260C RFC1P38630 861 aaKnown RBP7□□□□□ -1.29
RGD1YBR260C FKH1P40466 484 aa7□□□□□ -1.29
RGD1YBR260C ERV41Q04651 352 aa7□□□□□ -1.29
RGD1YBR260C RAV1P47104 1357 aa6.99□□□□□ -1.29
RGD1YBR260C RSC8P43609 557 aaKnown RBP6.99□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 7.3 ms