RNA–Protein interactions for RNA: YBR217W

ATG12, Transcript of Ubiquitin-like modifier involved in autophagy and the Cvt pathway, yeast

Gene ATG12, Length 561 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG12	YBR217W	ATG13	Q06628	738 aa		7.61	□□□□□ -1.19
ATG12	YBR217W	INP54	Q08227	384 aa	Known RBP	7.61	□□□□□ -1.19
ATG12	YBR217W	SSA2	P10592	639 aa	Known RBP	7.6	□□□□□ -1.19
ATG12	YBR217W	OSM1	P21375	501 aa	Known RBP	7.6	□□□□□ -1.19
ATG12	YBR217W	ALD2	P47771	506 aa		7.6	□□□□□ -1.19
ATG12	YBR217W	DSD1	P53095	428 aa		7.6	□□□□□ -1.19
ATG12	YBR217W	HSP104	P31539	908 aa	Known RBP	7.59	□□□□□ -1.19
ATG12	YBR217W	GTT3	P39996	337 aa		7.59	□□□□□ -1.19
ATG12	YBR217W	AKL1	P38080	1108 aa	Known RBP	7.57	□□□□□ -1.2
ATG12	YBR217W	MSB4	Q12317	492 aa		7.57	□□□□□ -1.2
ATG12	YBR217W	RRP46	P53256	223 aa	Predicted RBP	7.56	□□□□□ -1.2
ATG12	YBR217W	NUP145	P49687	1317 aa		7.55	□□□□□ -1.2
ATG12	YBR217W	YBP2	P53169	641 aa		7.54	□□□□□ -1.2
ATG12	YBR217W	CTF4	Q01454	927 aa		7.54	□□□□□ -1.2
ATG12	YBR217W	TUM1	Q08686	304 aa	Known RBP	7.54	□□□□□ -1.2
ATG12	YBR217W	SPT7	P35177	1332 aa		7.53	□□□□□ -1.2
ATG12	YBR217W	GRX1	P25373	110 aa	Known RBP	7.53	□□□□□ -1.2
ATG12	YBR217W	BDF1	P35817	686 aa		7.53	□□□□□ -1.2
ATG12	YBR217W	GRE2	Q12068	342 aa	Known RBP	7.53	□□□□□ -1.2
ATG12	YBR217W	DIP2	Q12220	943 aa	Predicted RBP	7.53	□□□□□ -1.2
ATG12	YBR217W	NTH2	P35172	780 aa		7.52	□□□□□ -1.21
ATG12	YBR217W	AOS1	Q06624	347 aa		7.52	□□□□□ -1.21
ATG12	YBR217W	ALD3	P54114	506 aa		7.51	□□□□□ -1.21
ATG12	YBR217W	RAD4	P14736	754 aa		7.5	□□□□□ -1.21
ATG12	YBR217W	YGL015C	P33199	130 aa		7.5	□□□□□ -1.21
ATG12	YBR217W	RTR1	P40084	226 aa	Predicted RBP	7.5	□□□□□ -1.21
ATG12	YBR217W	BUG1	Q12191	341 aa		7.5	□□□□□ -1.21
ATG12	YBR217W	KCC4	P25389	1037 aa		7.48	□□□□□ -1.21
ATG12	YBR217W	ALE1	Q08548	619 aa		7.48	□□□□□ -1.21
ATG12	YBR217W	RMT2	Q03305	412 aa		7.47	□□□□□ -1.21
ATG12	YBR217W	PRD1	P25375	712 aa		7.46	□□□□□ -1.22
ATG12	YBR217W	TOS1	P38288	455 aa		7.46	□□□□□ -1.22
ATG12	YBR217W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	7.46	□□□□□ -1.22	not detected
ATG12	YBR217W	UTP22	P53254	1237 aa	Predicted RBP	7.46	□□□□□ -1.22
ATG12	YBR217W	YNL050C	P53952	270 aa		7.46	□□□□□ -1.22
ATG12	YBR217W	HPC2	Q01448	625 aa		7.46	□□□□□ -1.22
ATG12	YBR217W	MPP10	P47083	593 aa	Known RBP	7.45	□□□□□ -1.22
ATG12	YBR217W	NOP53	Q12080	455 aa	Known RBP	7.45	□□□□□ -1.22
ATG12	YBR217W	NYV1	Q12255	253 aa		7.45	□□□□□ -1.22
ATG12	YBR217W	MRPL32	P25348	183 aa		7.44	□□□□□ -1.22
ATG12	YBR217W	EAF6	P47128	113 aa		7.44	□□□□□ -1.22
ATG12	YBR217W	TEA1	P47988	759 aa		7.44	□□□□□ -1.22
ATG12	YBR217W	THI22	Q06490	572 aa		7.44	□□□□□ -1.22
ATG12	YBR217W	RIX7	Q07844	837 aa	Known RBP	7.44	□□□□□ -1.22
ATG12	YBR217W	CTI6	Q08923	506 aa		7.44	□□□□□ -1.22
ATG12	YBR217W	UGA3	P26370	528 aa		7.43	□□□□□ -1.22
ATG12	YBR217W	AVT3	P36062	692 aa		7.43	□□□□□ -1.22
ATG12	YBR217W	SAP155	P43612	1002 aa		7.43	□□□□□ -1.22
ATG12	YBR217W	IOC4	Q04213	475 aa		7.43	□□□□□ -1.22
ATG12	YBR217W	SSA1	P10591	642 aa	Known RBP	7.42	□□□□□ -1.22
ATG12	YBR217W	YBR287W	P38355	427 aa		7.42	□□□□□ -1.22
ATG12	YBR217W	ZDS1	P50111	915 aa	Known RBP	7.42	□□□□□ -1.22
ATG12	YBR217W	NSE3	Q05541	303 aa		7.42	□□□□□ -1.22
ATG12	YBR217W	SER1	P33330	395 aa	Known RBP	7.41	□□□□□ -1.22
ATG12	YBR217W	RRT14	P40470	206 aa		7.41	□□□□□ -1.22
ATG12	YBR217W	YDL144C	Q07589	356 aa		7.41	□□□□□ -1.22
ATG12	YBR217W	RTT109	Q07794	436 aa		7.41	□□□□□ -1.22
ATG12	YBR217W	PHM7	Q12252	991 aa		7.41	□□□□□ -1.22
ATG12	YBR217W	MSN5	P52918	1224 aa		7.4	□□□□□ -1.22
ATG12	YBR217W	YGL082W	P53155	381 aa		7.4	□□□□□ -1.22
ATG12	YBR217W	MDG1	P53885	366 aa		7.4	□□□□□ -1.22
ATG12	YBR217W	ZDS2	P54786	942 aa		7.4	□□□□□ -1.22
ATG12	YBR217W	BMS1	Q08965	1183 aa	Known RBP	7.4	□□□□□ -1.22
ATG12	YBR217W	UTP10	P42945	1769 aa	Known RBP	7.4	□□□□□ -1.23
ATG12	YBR217W	COQ4	O13525	335 aa		7.39	□□□□□ -1.23
ATG12	YBR217W	TPD3	P31383	635 aa		7.39	□□□□□ -1.23
ATG12	YBR217W	MAM1	P40065	302 aa		7.39	□□□□□ -1.23
ATG12	YBR217W	YFR016C	P43597	1233 aa	Known RBP	7.39	□□□□□ -1.23
ATG12	YBR217W	SSP2	Q08646	371 aa		7.39	□□□□□ -1.23
ATG12	YBR217W	LPD1	P09624	499 aa	Known RBP	7.38	□□□□□ -1.23
ATG12	YBR217W	APL2	P36000	726 aa	Predicted RBP	7.38	□□□□□ -1.23
ATG12	YBR217W	GYP7	P48365	746 aa		7.38	□□□□□ -1.23
ATG12	YBR217W	DCD1	P06773	312 aa		7.37	□□□□□ -1.23
ATG12	YBR217W	ARG8	P18544	423 aa		7.37	□□□□□ -1.23
ATG12	YBR217W	CWH41	P53008	833 aa		7.37	□□□□□ -1.23
ATG12	YBR217W	HEF3	P53978	1044 aa	Known RBP	7.37	□□□□□ -1.23
ATG12	YBR217W	VPS64	Q03944	604 aa		7.37	□□□□□ -1.23
ATG12	YBR217W	CTT1	P06115	562 aa		7.36	□□□□□ -1.23
ATG12	YBR217W	YKL222C	P35995	705 aa		7.35	□□□□□ -1.23
ATG12	YBR217W	ERT1	P38140	529 aa		7.35	□□□□□ -1.23
ATG12	YBR217W	KIN4	Q01919	800 aa		7.35	□□□□□ -1.23
ATG12	YBR217W	YOL057W	Q08225	711 aa		7.35	□□□□□ -1.23
ATG12	YBR217W	YPR204W	Q08995	1032 aa		7.35	□□□□□ -1.23
ATG12	YBR217W	PMD1	P32634	1753 aa		7.34	□□□□□ -1.23
ATG12	YBR217W	YER156C	P40093	338 aa	Known RBP	7.34	□□□□□ -1.23
ATG12	YBR217W	LYS2	P07702	1392 aa		7.33	□□□□□ -1.24
ATG12	YBR217W	CAF20	P12962	161 aa	Known RBP	7.33	□□□□□ -1.24
ATG12	YBR217W	SUI2	P20459	304 aa	Known RBP	7.33	□□□□□ -1.24
ATG12	YBR217W	RAT1	Q02792	1006 aa	Known RBP	7.33	□□□□□ -1.24
ATG12	YBR217W	SRT1	Q03175	343 aa		7.33	□□□□□ -1.24
ATG12	YBR217W	SMY1	P32364	656 aa	Known RBP	7.32	□□□□□ -1.24
ATG12	YBR217W	PFF1	P38244	976 aa		7.32	□□□□□ -1.24
ATG12	YBR217W	BDF2	Q07442	638 aa		7.32	□□□□□ -1.24
ATG12	YBR217W	RPP0	P05317	312 aa	Known RBP	7.3	□□□□□ -1.24
ATG12	YBR217W	IRC3	Q06683	689 aa		7.3	□□□□□ -1.24
ATG12	YBR217W	VPS27	P40343	622 aa	Known RBP	7.29	□□□□□ -1.24
ATG12	YBR217W	SQS1	P53866	767 aa	Known RBP	7.29	□□□□□ -1.24
ATG12	YBR217W	DNM1	P54861	757 aa		7.29	□□□□□ -1.24
ATG12	YBR217W	FCP1	Q03254	732 aa		7.29	□□□□□ -1.24
ATG12	YBR217W	PKH1	Q03407	766 aa		7.29	□□□□□ -1.24

Retrieved 100 of 5,963 RNA–protein pairs in 22.8 ms