RNA–Protein interactions for RNA: YBR200W

BEM1, Transcript of Protein containing SH3-domains, yeastyeast

Gene BEM1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BEM1YBR200W COG8Q04632 607 aa9□□□□□ -0.97
BEM1YBR200W ESC2Q06340 456 aa9□□□□□ -0.97
BEM1YBR200W BUD31P25337 157 aaPredicted RBP9□□□□□ -0.97
BEM1YBR200W BYE1P36106 594 aa9□□□□□ -0.97
BEM1YBR200W LCD1Q04377 747 aa9□□□□□ -0.97
BEM1YBR200W MLP1Q02455 1875 aaKnown RBP8.99□□□□□ -0.97
BEM1YBR200W RTG3P38165 486 aa8.99□□□□□ -0.97
BEM1YBR200W NNF2P53253 936 aa8.98□□□□□ -0.97
BEM1YBR200W MDG1P53885 366 aa8.98□□□□□ -0.97
BEM1YBR200W CAB1Q04430 367 aa8.98□□□□□ -0.97
BEM1YBR200W IMH1Q06704 911 aaKnown RBP8.98□□□□□ -0.97
BEM1YBR200W POL32P47110 350 aa8.97□□□□□ -0.97
BEM1YBR200W RSC1P53236 928 aa8.97□□□□□ -0.97
BEM1YBR200W TRK1P12685 1235 aa8.97□□□□□ -0.97
BEM1YBR200W DAL5P15365 543 aa8.97□□□□□ -0.97
BEM1YBR200W TIF4632P39936 914 aaKnown RBP8.96□□□□□ -0.98
BEM1YBR200W TAN1P53072 289 aaPredicted RBP8.96□□□□□ -0.98
BEM1YBR200W ETT1Q08421 412 aaKnown RBP8.96□□□□□ -0.98
BEM1YBR200W RAD9P14737 1309 aa8.96□□□□□ -0.98
BEM1YBR200W NUP192P47054 1683 aa8.96□□□□□ -0.98
BEM1YBR200W YIL092WP40497 633 aa8.95□□□□□ -0.98
BEM1YBR200W HAP5Q02516 242 aa8.95□□□□□ -0.98
BEM1YBR200W SRS2P12954 1174 aa8.94□□□□□ -0.98
BEM1YBR200W SIC1P38634 284 aa8.94□□□□□ -0.98
BEM1YBR200W TCD1P38756 429 aa8.94□□□□□ -0.98
BEM1YBR200W GRX3Q03835 250 aa8.94□□□□□ -0.98
BEM1YBR200W SAP155P43612 1002 aa8.94□□□□□ -0.98
BEM1YBR200W SPE2P21182 396 aa8.93□□□□□ -0.98
BEM1YBR200W LTV1P34078 463 aa8.93□□□□□ -0.98
BEM1YBR200W YSH1Q06224 779 aaPredicted RBP8.93□□□□□ -0.98
BEM1YBR200W YEF3P16521 1044 aaKnown RBP8.92□□□□□ -0.98
BEM1YBR200W HOS3Q02959 697 aaKnown RBP8.92□□□□□ -0.98
BEM1YBR200W PRP3Q03338 469 aaPredicted RBP8.92□□□□□ -0.98
BEM1YBR200W HIF1Q12373 385 aa8.92□□□□□ -0.98
BEM1YBR200W RRP5Q05022 1729 aaKnown RBP8.92□□□□□ -0.98
BEM1YBR200W MSH3P25336 1018 aa8.91□□□□□ -0.98
BEM1YBR200W RKM3P38222 552 aa8.91□□□□□ -0.98
BEM1YBR200W CHZ1P40019 153 aaPredicted RBP8.91□□□□□ -0.98
BEM1YBR200W TLG1Q03322 224 aa8.91□□□□□ -0.98
BEM1YBR200W RTR1P40084 226 aaPredicted RBP8.91□□□□□ -0.98
BEM1YBR200W ALD4P46367 519 aaKnown RBP8.91□□□□□ -0.98
BEM1YBR200W TSR3Q12094 313 aaKnown RBP8.91□□□□□ -0.98
BEM1YBR200W YRF1-2P40105 1681 aa8.91□□□□□ -0.98
BEM1YBR200W PET111P08468 800 aa8.9□□□□□ -0.98
BEM1YBR200W MCM2P29469 868 aa8.9□□□□□ -0.98
BEM1YBR200W CBF5P33322 483 aaKnown RBP RIP-Chip data8.9□□□□□ -0.98not detected
BEM1YBR200W PUF6Q04373 656 aaKnown RBP8.89□□□□□ -0.99
BEM1YBR200W NOP8Q08287 484 aaPredicted RBP8.89□□□□□ -0.99
BEM1YBR200W CLB5P30283 435 aa8.88□□□□□ -0.99
BEM1YBR200W TPD3P31383 635 aa8.88□□□□□ -0.99
BEM1YBR200W MIC60P36112 540 aa8.88□□□□□ -0.99
BEM1YBR200W CIN4P39110 191 aa8.88□□□□□ -0.99
BEM1YBR200W FKH1P40466 484 aa8.88□□□□□ -0.99
BEM1YBR200W VPS60Q03390 229 aa8.88□□□□□ -0.99
BEM1YBR200W ROM2P51862 1356 aaKnown RBP8.88□□□□□ -0.99
BEM1YBR200W SRP54P20424 541 aaKnown RBP8.88□□□□□ -0.99
BEM1YBR200W PRP45P28004 379 aaPredicted RBP8.88□□□□□ -0.99
BEM1YBR200W DOS2P54858 310 aa8.88□□□□□ -0.99
BEM1YBR200W YRF1-4O13559 1382 aa8.87□□□□□ -0.99
BEM1YBR200W YML133CQ03099 1374 aa8.87□□□□□ -0.99
BEM1YBR200W YLL067CQ07888 1374 aa8.87□□□□□ -0.99
BEM1YBR200W YLL066CQ99208 1374 aa8.87□□□□□ -0.99
BEM1YBR200W NHA1Q99271 985 aa8.86□□□□□ -0.99
BEM1YBR200W DSN1P40568 576 aa8.85□□□□□ -0.99
BEM1YBR200W STU2P46675 888 aa8.85□□□□□ -0.99
BEM1YBR200W ECM16Q04217 1267 aaKnown RBP8.85□□□□□ -0.99
BEM1YBR200W RPN7Q06103 429 aaKnown RBP8.85□□□□□ -0.99
BEM1YBR200W RPN12P32496 274 aa8.85□□□□□ -0.99
BEM1YBR200W MAK21Q12176 1025 aaKnown RBP8.85□□□□□ -0.99
BEM1YBR200W NUP145P49687 1317 aa8.84□□□□□ -0.99
BEM1YBR200W CLB1P24868 471 aa8.84□□□□□ -0.99
BEM1YBR200W DEP1P31385 405 aa8.84□□□□□ -0.99
BEM1YBR200W SPT16P32558 1035 aaKnown RBP8.84□□□□□ -0.99
BEM1YBR200W SAP190P36123 1033 aa8.84□□□□□ -0.99
BEM1YBR200W BDH2P39713 417 aa8.84□□□□□ -0.99
BEM1YBR200W RRT14P40470 206 aa8.84□□□□□ -0.99
BEM1YBR200W RRP46P53256 223 aaPredicted RBP8.84□□□□□ -0.99
BEM1YBR200W SFI1Q12369 946 aa8.84□□□□□ -0.99
BEM1YBR200W SIR4P11978 1358 aa8.84□□□□□ -0.99
BEM1YBR200W TOA1P32773 286 aa8.83□□□□□ -1
BEM1YBR200W SWE1P32944 819 aa8.83□□□□□ -1
BEM1YBR200W RVS167P39743 482 aaKnown RBP8.83□□□□□ -1
BEM1YBR200W NOP14Q99207 810 aaKnown RBP8.83□□□□□ -1
BEM1YBR200W CIR1P42940 261 aa8.82□□□□□ -1
BEM1YBR200W RPN11P43588 306 aaKnown RBP8.82□□□□□ -1
BEM1YBR200W RNT1Q02555 471 aa8.82□□□□□ -1
BEM1YBR200W THI22Q06490 572 aa8.82□□□□□ -1
BEM1YBR200W YBL086CP38177 466 aa8.81□□□□□ -1
BEM1YBR200W HST1P53685 503 aa8.81□□□□□ -1
BEM1YBR200W CYC8P14922 966 aa8.81□□□□□ -1
BEM1YBR200W DLD1P32891 587 aa8.81□□□□□ -1
BEM1YBR200W MED8P38304 223 aa8.81□□□□□ -1
BEM1YBR200W YGL081WP53156 320 aa8.81□□□□□ -1
BEM1YBR200W HEF3P53978 1044 aaKnown RBP8.81□□□□□ -1
BEM1YBR200W APL5Q08951 932 aaKnown RBP8.81□□□□□ -1
BEM1YBR200W RAD50P12753 1312 aa8.8□□□□□ -1
BEM1YBR200W SPB4P25808 606 aaPredicted RBP8.8□□□□□ -1
BEM1YBR200W ECM1P39715 212 aa8.8□□□□□ -1
BEM1YBR200W RSM25P40496 264 aa8.8□□□□□ -1
BEM1YBR200W CEP3P40969 608 aa8.8□□□□□ -1
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms