RNA–Protein interactions for RNA: YBL103C

RTG3, Transcript of bHLH/Zip transcription factor for retrograde (RTG) and TOR pathways, yeastyeast

Gene RTG3, Length 1,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTG3YBL103C MRT4P33201 236 aaKnown RBP8.99□□□□□ -0.97
RTG3YBL103C APP1P53933 587 aa8.98□□□□□ -0.97
RTG3YBL103C YJR115WP47152 169 aa8.96□□□□□ -0.98
RTG3YBL103C NAF1P53919 492 aaKnown RBP8.96□□□□□ -0.98
RTG3YBL103C YPR084WQ06821 456 aa8.96□□□□□ -0.98
RTG3YBL103C UGA3P26370 528 aa8.95□□□□□ -0.98
RTG3YBL103C MSB3P48566 633 aaPredicted RBP8.95□□□□□ -0.98
RTG3YBL103C YDJ1P25491 409 aaKnown RBP8.93□□□□□ -0.98
RTG3YBL103C BIO2P32451 375 aa8.92□□□□□ -0.98
RTG3YBL103C GUT2P32191 649 aa8.91□□□□□ -0.98
RTG3YBL103C EMW1P42842 904 aaKnown RBP8.91□□□□□ -0.98
RTG3YBL103C SPT5P27692 1063 aaKnown RBP8.89□□□□□ -0.99
RTG3YBL103C YJL007CP47080 104 aa8.89□□□□□ -0.99
RTG3YBL103C ISF1P32488 338 aa8.89□□□□□ -0.99
RTG3YBL103C YBL086CP38177 466 aa8.89□□□□□ -0.99
RTG3YBL103C STE20Q03497 939 aaKnown RBP8.89□□□□□ -0.99
RTG3YBL103C YNL108CP53929 270 aa8.88□□□□□ -0.99
RTG3YBL103C MCM16Q12262 181 aa8.88□□□□□ -0.99
RTG3YBL103C PTK2P47116 818 aaKnown RBP8.87□□□□□ -0.99
RTG3YBL103C HGH1P48362 394 aaKnown RBP8.87□□□□□ -0.99
RTG3YBL103C FRA1Q07825 749 aa8.87□□□□□ -0.99
RTG3YBL103C MET22P32179 357 aa8.86□□□□□ -0.99
RTG3YBL103C EMP47P43555 445 aa8.86□□□□□ -0.99
RTG3YBL103C DMA2P53924 522 aa8.85□□□□□ -0.99
RTG3YBL103C SRF1Q12516 437 aa8.85□□□□□ -0.99
RTG3YBL103C MKS1P34072 584 aa8.84□□□□□ -0.99
RTG3YBL103C SUP45P12385 437 aaKnown RBP8.83□□□□□ -1
RTG3YBL103C GAR1P28007 205 aaKnown RBP8.83□□□□□ -1
RTG3YBL103C BIM1P40013 344 aa8.83□□□□□ -1
RTG3YBL103C RTT106P40161 455 aa8.83□□□□□ -1
RTG3YBL103C ENO2P00925 437 aaKnown RBP8.82□□□□□ -1
RTG3YBL103C YDR444WQ04093 687 aa8.82□□□□□ -1
RTG3YBL103C ENV9Q08651 330 aa8.82□□□□□ -1
RTG3YBL103C ATG32P40458 529 aa8.81□□□□□ -1
RTG3YBL103C DFG5Q05031 458 aa8.81□□□□□ -1
RTG3YBL103C ATG20Q07528 640 aa8.81□□□□□ -1
RTG3YBL103C FBP26P32604 452 aa8.79□□□□□ -1
RTG3YBL103C AAD14P42884 376 aa8.78□□□□□ -1
RTG3YBL103C ARG82P07250 355 aa8.77□□□□□ -1
RTG3YBL103C MRX12P47084 519 aa8.77□□□□□ -1
RTG3YBL103C LCB5Q06147 687 aaKnown RBP8.77□□□□□ -1
RTG3YBL103C NUP85P46673 744 aa8.77□□□□□ -1.01
RTG3YBL103C TIF1P10081 395 aaKnown RBP8.76□□□□□ -1.01
RTG3YBL103C APL6P46682 809 aa8.76□□□□□ -1.01
RTG3YBL103C YPP1P46951 817 aa8.76□□□□□ -1.01
RTG3YBL103C BDS1Q08347 646 aa8.76□□□□□ -1.01
RTG3YBL103C ISU1Q03020 165 aa8.75□□□□□ -1.01
RTG3YBL103C ISR1Q06098 443 aaKnown RBP8.75□□□□□ -1.01
RTG3YBL103C GBP2P25555 427 aaKnown RBP RIP-Chip data8.74□□□□□ -1.01not detected
RTG3YBL103C DLD1P32891 587 aa8.74□□□□□ -1.01
RTG3YBL103C RIM21P48565 533 aa8.74□□□□□ -1.01
RTG3YBL103C OPT2Q06593 877 aa8.74□□□□□ -1.01
RTG3YBL103C STE6P12866 1290 aa8.73□□□□□ -1.01
RTG3YBL103C RPL34BP40525 121 aaKnown RBP8.73□□□□□ -1.01
RTG3YBL103C RTG2P32608 588 aaKnown RBP8.71□□□□□ -1.01
RTG3YBL103C SOH1P38633 127 aa8.7□□□□□ -1.02
RTG3YBL103C HAL5P38970 855 aaKnown RBP8.7□□□□□ -1.02
RTG3YBL103C YLR346CQ06139 101 aa8.7□□□□□ -1.02
RTG3YBL103C LSC2P53312 427 aa8.7□□□□□ -1.02
RTG3YBL103C ENO1P00924 437 aaKnown RBP8.68□□□□□ -1.02
RTG3YBL103C RDS2P19541 446 aaKnown RBP8.68□□□□□ -1.02
RTG3YBL103C YJR098CP47139 656 aa8.68□□□□□ -1.02
RTG3YBL103C MIP1P15801 1254 aa8.67□□□□□ -1.02
RTG3YBL103C ATG3P40344 310 aa8.67□□□□□ -1.02
RTG3YBL103C MRX10Q05648 414 aa8.67□□□□□ -1.02
RTG3YBL103C UTP13Q05946 817 aaKnown RBP8.65□□□□□ -1.02
RTG3YBL103C YPR204WQ08995 1032 aa8.65□□□□□ -1.02
RTG3YBL103C GLY1P37303 387 aaKnown RBP8.64□□□□□ -1.03
RTG3YBL103C TCB1Q12466 1186 aa8.64□□□□□ -1.03
RTG3YBL103C DAT1P13483 248 aaKnown RBP8.64□□□□□ -1.03
RTG3YBL103C UTR2P32623 467 aa8.64□□□□□ -1.03
RTG3YBL103C SCW11P53189 542 aa8.63□□□□□ -1.03
RTG3YBL103C YPL062WQ02781 134 aa8.63□□□□□ -1.03
RTG3YBL103C YDL176WQ12027 708 aa8.63□□□□□ -1.03
RTG3YBL103C WTM2Q12206 467 aa8.63□□□□□ -1.03
RTG3YBL103C RPP2BP02400 110 aaKnown RBP8.62□□□□□ -1.03
RTG3YBL103C SPT2P06843 333 aaPredicted RBP8.62□□□□□ -1.03
RTG3YBL103C DLD3P39976 496 aaKnown RBP8.62□□□□□ -1.03
RTG3YBL103C UBP2Q01476 1272 aa8.62□□□□□ -1.03
RTG3YBL103C HDA3Q06623 655 aa8.62□□□□□ -1.03
RTG3YBL103C TY1A-BLQ12266 440 aa8.62□□□□□ -1.03
RTG3YBL103C CAF120P53836 1060 aa8.61□□□□□ -1.03
RTG3YBL103C CBC2Q08920 208 aaKnown RBP RIP-Chip data8.6□□□□□ -1.03not detected
RTG3YBL103C RGA1P39083 1007 aa8.59□□□□□ -1.03
RTG3YBL103C ACO2P39533 789 aa8.58□□□□□ -1.04
RTG3YBL103C TBS1P38114 1094 aa8.57□□□□□ -1.04
RTG3YBL103C PEP12P32854 288 aa8.56□□□□□ -1.04
RTG3YBL103C UTP7P40055 554 aaKnown RBP8.56□□□□□ -1.04
RTG3YBL103C OSH7P38755 437 aa8.55□□□□□ -1.04
RTG3YBL103C SLX8P40072 274 aa8.55□□□□□ -1.04
RTG3YBL103C YIR007WP40566 764 aa8.54□□□□□ -1.04
RTG3YBL103C KTR7P40504 517 aa8.53□□□□□ -1.04
RTG3YBL103C AIM9P40053 627 aaKnown RBP8.52□□□□□ -1.05
RTG3YBL103C PDI1P17967 522 aaKnown RBP8.51□□□□□ -1.05
RTG3YBL103C DAL1P32375 460 aa8.51□□□□□ -1.05
RTG3YBL103C SSN3P39073 555 aa8.51□□□□□ -1.05
RTG3YBL103C VTC4P47075 721 aa8.51□□□□□ -1.05
RTG3YBL103C SWI5P08153 709 aa8.49□□□□□ -1.05
RTG3YBL103C ROG3P43602 733 aa8.49□□□□□ -1.05
RTG3YBL103C SUM1P46676 1062 aa8.49□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms