RNA–Protein interactions for RNA: YBL022C

PIM1, Transcript of ATP-dependent Lon protease, yeast

Gene PIM1, Length 3,402 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PIM1	YBL022C	RAD2	P07276	1031 aa		4.89	□□□□□ -1.63
PIM1	YBL022C	TIF4632	P39936	914 aa	Known RBP	4.89	□□□□□ -1.63
PIM1	YBL022C	HOS3	Q02959	697 aa	Known RBP	4.89	□□□□□ -1.63
PIM1	YBL022C	HYR1	P40581	163 aa	Known RBP	4.88	□□□□□ -1.63
PIM1	YBL022C	MBR1	P23493	339 aa		4.88	□□□□□ -1.63
PIM1	YBL022C	CLB5	P30283	435 aa		4.88	□□□□□ -1.63
PIM1	YBL022C	MRS2	Q01926	470 aa		4.88	□□□□□ -1.63
PIM1	YBL022C	YMR102C	Q03177	834 aa		4.88	□□□□□ -1.63
PIM1	YBL022C	ETT1	Q08421	412 aa	Known RBP	4.88	□□□□□ -1.63
PIM1	YBL022C	RAD16	P31244	790 aa		4.87	□□□□□ -1.63
PIM1	YBL022C	SWE1	P32944	819 aa		4.87	□□□□□ -1.63
PIM1	YBL022C	DEF1	P35732	738 aa	Known RBP	4.87	□□□□□ -1.63
PIM1	YBL022C	PBY1	P38254	753 aa		4.87	□□□□□ -1.63
PIM1	YBL022C	SAP155	P43612	1002 aa		4.87	□□□□□ -1.63
PIM1	YBL022C	STU2	P46675	888 aa		4.87	□□□□□ -1.63
PIM1	YBL022C	NPA3	P47122	385 aa		4.87	□□□□□ -1.63
PIM1	YBL022C	ILV3	P39522	585 aa	Known RBP	4.87	□□□□□ -1.63
PIM1	YBL022C	VPS60	Q03390	229 aa		4.87	□□□□□ -1.63
PIM1	YBL022C	LYS2	P07702	1392 aa		4.86	□□□□□ -1.63
PIM1	YBL022C	RAD51	P25454	400 aa		4.86	□□□□□ -1.63
PIM1	YBL022C	YGL082W	P53155	381 aa		4.86	□□□□□ -1.63
PIM1	YBL022C	PSH1	Q12161	406 aa		4.86	□□□□□ -1.63
PIM1	YBL022C	RAD50	P12753	1312 aa		4.86	□□□□□ -1.63
PIM1	YBL022C	TCD1	P38756	429 aa		4.86	□□□□□ -1.63
PIM1	YBL022C	FKH1	P40466	484 aa		4.86	□□□□□ -1.63
PIM1	YBL022C	CEP3	P40969	608 aa		4.86	□□□□□ -1.63
PIM1	YBL022C	HRQ1	Q05549	1077 aa		4.86	□□□□□ -1.63
PIM1	YBL022C	RPN12	P32496	274 aa		4.85	□□□□□ -1.63
PIM1	YBL022C	ITC1	P53125	1264 aa		4.85	□□□□□ -1.63
PIM1	YBL022C	THI22	Q06490	572 aa		4.85	□□□□□ -1.63
PIM1	YBL022C	NOP8	Q08287	484 aa	Predicted RBP	4.85	□□□□□ -1.63
PIM1	YBL022C	TY4B-H	P0C2J7	1802 aa		4.85	□□□□□ -1.63
PIM1	YBL022C	TY4B-J	P47024	1803 aa		4.85	□□□□□ -1.63
PIM1	YBL022C	SWI3	P32591	825 aa		4.85	□□□□□ -1.63
PIM1	YBL022C	SRS2	P12954	1174 aa		4.84	□□□□□ -1.63
PIM1	YBL022C	RVS167	P39743	482 aa	Known RBP	4.84	□□□□□ -1.63
PIM1	YBL022C	MPP10	P47083	593 aa	Known RBP	4.84	□□□□□ -1.63
PIM1	YBL022C	SSL2	Q00578	843 aa		4.84	□□□□□ -1.63
PIM1	YBL022C	RTG3	P38165	486 aa		4.84	□□□□□ -1.64
PIM1	YBL022C	YGL140C	P53120	1219 aa		4.84	□□□□□ -1.64
PIM1	YBL022C	TPM2	P40414	161 aa		4.83	□□□□□ -1.64
PIM1	YBL022C	NOP7	P53261	605 aa	Known RBP	4.83	□□□□□ -1.64
PIM1	YBL022C	UBP10	P53874	792 aa	Predicted RBP	4.83	□□□□□ -1.64
PIM1	YBL022C	MVP1	P40959	511 aa	Known RBP	4.82	□□□□□ -1.64
PIM1	YBL022C	ORC1	P54784	914 aa	Predicted RBP	4.82	□□□□□ -1.64
PIM1	YBL022C	ECM16	Q04217	1267 aa	Known RBP	4.82	□□□□□ -1.64
PIM1	YBL022C	YNL050C	P53952	270 aa		4.82	□□□□□ -1.64
PIM1	YBL022C	PRP3	Q03338	469 aa	Predicted RBP	4.82	□□□□□ -1.64
PIM1	YBL022C	DSN1	P40568	576 aa		4.82	□□□□□ -1.64
PIM1	YBL022C	HST1	P53685	503 aa		4.82	□□□□□ -1.64
PIM1	YBL022C	BNR1	P40450	1375 aa		4.82	□□□□□ -1.64
PIM1	YBL022C	YMR1	P47147	688 aa	Known RBP RIP-Chip data	4.81	□□□□□ -1.64	not detected
PIM1	YBL022C	UTP13	Q05946	817 aa	Known RBP	4.81	□□□□□ -1.64
PIM1	YBL022C	RAD3	P06839	778 aa		4.81	□□□□□ -1.64
PIM1	YBL022C	RIM101	P33400	625 aa		4.81	□□□□□ -1.64
PIM1	YBL022C	PXL1	P36166	706 aa		4.81	□□□□□ -1.64
PIM1	YBL022C	YAP3	P38749	330 aa		4.81	□□□□□ -1.64
PIM1	YBL022C	RRP15	Q06511	250 aa	Predicted RBP	4.81	□□□□□ -1.64
PIM1	YBL022C	FAS2	P19097	1887 aa	Known RBP	4.8	□□□□□ -1.64
PIM1	YBL022C	SPT2	P06843	333 aa	Predicted RBP	4.8	□□□□□ -1.64
PIM1	YBL022C	STE11	P23561	717 aa		4.8	□□□□□ -1.64
PIM1	YBL022C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.8	□□□□□ -1.64	not detected
PIM1	YBL022C	TAN1	P53072	289 aa	Predicted RBP	4.8	□□□□□ -1.64
PIM1	YBL022C	GCR2	Q01722	534 aa		4.79	□□□□□ -1.64
PIM1	YBL022C	ERV41	Q04651	352 aa		4.79	□□□□□ -1.64
PIM1	YBL022C	CCC2	P38995	1004 aa		4.79	□□□□□ -1.64
PIM1	YBL022C	MSH4	P40965	878 aa	Predicted RBP	4.79	□□□□□ -1.64
PIM1	YBL022C	HSP82	P02829	709 aa	Known RBP	4.79	□□□□□ -1.64
PIM1	YBL022C	ELM1	P32801	640 aa		4.79	□□□□□ -1.64
PIM1	YBL022C	RNT1	Q02555	471 aa		4.79	□□□□□ -1.64
PIM1	YBL022C	YKL068W-A	Q3E826	78 aa		4.79	□□□□□ -1.64
PIM1	YBL022C	DLD1	P32891	587 aa		4.78	□□□□□ -1.64
PIM1	YBL022C	CWH41	P53008	833 aa		4.78	□□□□□ -1.64
PIM1	YBL022C	KEX1	P09620	729 aa		4.78	□□□□□ -1.64
PIM1	YBL022C	DEP1	P31385	405 aa		4.78	□□□□□ -1.64
PIM1	YBL022C	AOS1	Q06624	347 aa		4.78	□□□□□ -1.64
PIM1	YBL022C	RTT107	P38850	1070 aa		4.78	□□□□□ -1.64
PIM1	YBL022C	VPS41	P38959	992 aa		4.78	□□□□□ -1.64
PIM1	YBL022C	GYL1	Q04322	720 aa		4.78	□□□□□ -1.64
PIM1	YBL022C	PRD1	P25375	712 aa		4.77	□□□□□ -1.65
PIM1	YBL022C	CTK3	P46963	296 aa	Predicted RBP	4.77	□□□□□ -1.65
PIM1	YBL022C	PET111	P08468	800 aa		4.77	□□□□□ -1.65
PIM1	YBL022C	RNA1	P11745	407 aa	Known RBP	4.77	□□□□□ -1.65
PIM1	YBL022C	DAL5	P15365	543 aa		4.77	□□□□□ -1.65
PIM1	YBL022C	PSE1	P32337	1089 aa	Known RBP	4.77	□□□□□ -1.65
PIM1	YBL022C	RPN7	Q06103	429 aa	Known RBP	4.77	□□□□□ -1.65
PIM1	YBL022C	SEC39	Q12745	709 aa		4.77	□□□□□ -1.65
PIM1	YBL022C	CYC8	P14922	966 aa		4.76	□□□□□ -1.65
PIM1	YBL022C	SPT5	P27692	1063 aa	Known RBP	4.76	□□□□□ -1.65
PIM1	YBL022C	TAF5	P38129	798 aa		4.76	□□□□□ -1.65
PIM1	YBL022C	RSC8	P43609	557 aa	Known RBP	4.76	□□□□□ -1.65
PIM1	YBL022C	CDC16	P09798	840 aa		4.76	□□□□□ -1.65
PIM1	YBL022C	BRN1	P38170	754 aa		4.76	□□□□□ -1.65
PIM1	YBL022C	ALD3	P54114	506 aa		4.76	□□□□□ -1.65
PIM1	YBL022C	CLB1	P24868	471 aa		4.76	□□□□□ -1.65
PIM1	YBL022C	SWH1	P35845	1188 aa		4.76	□□□□□ -1.65
PIM1	YBL022C	COG8	Q04632	607 aa		4.76	□□□□□ -1.65
PIM1	YBL022C	COG4	Q06096	861 aa		4.76	□□□□□ -1.65
PIM1	YBL022C	SFI1	Q12369	946 aa		4.75	□□□□□ -1.65
PIM1	YBL022C	MNR2	P35724	969 aa		4.75	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms