RNA–Protein interactions for RNA: YAL011W

SWC3, Transcript of Protein of unknown function, yeastyeast

Gene SWC3, Length 1,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWC3YAL011W YML133CQ03099 1374 aa5.69□□□□□ -1.5
SWC3YAL011W YLL067CQ07888 1374 aa5.69□□□□□ -1.5
SWC3YAL011W YLL066CQ99208 1374 aa5.69□□□□□ -1.5
SWC3YAL011W KEX1P09620 729 aa5.69□□□□□ -1.5
SWC3YAL011W DIT2P21595 489 aa5.69□□□□□ -1.5
SWC3YAL011W YFR016CP43597 1233 aaKnown RBP5.69□□□□□ -1.5
SWC3YAL011W CFT1Q06632 1357 aaKnown RBP5.69□□□□□ -1.5
SWC3YAL011W USO1P25386 1790 aa5.69□□□□□ -1.5
SWC3YAL011W SNF2P22082 1703 aa5.68□□□□□ -1.5
SWC3YAL011W GLN1P32288 370 aaKnown RBP5.68□□□□□ -1.5
SWC3YAL011W PPH3P32345 308 aa5.68□□□□□ -1.5
SWC3YAL011W YGL015CP33199 130 aa5.68□□□□□ -1.5
SWC3YAL011W CDC27P38042 758 aa5.68□□□□□ -1.5
SWC3YAL011W VPS27P40343 622 aaKnown RBP5.67□□□□□ -1.5
SWC3YAL011W RPL34AP87262 121 aaPredicted RBP5.67□□□□□ -1.5
SWC3YAL011W MAK10Q02197 733 aa5.67□□□□□ -1.5
SWC3YAL011W YDL144CQ07589 356 aa5.67□□□□□ -1.5
SWC3YAL011W CDC45Q08032 650 aa5.67□□□□□ -1.5
SWC3YAL011W RPP0P05317 312 aaKnown RBP5.66□□□□□ -1.5
SWC3YAL011W BIM1P40013 344 aa5.66□□□□□ -1.5
SWC3YAL011W JSN1P47135 1091 aaKnown RBP RIP-Chip data5.66□□□□□ -1.5not detected
SWC3YAL011W UBX5Q06682 500 aa5.66□□□□□ -1.5
SWC3YAL011W RVB2Q12464 471 aaKnown RBP5.66□□□□□ -1.5
SWC3YAL011W PSK1P31374 1356 aa5.66□□□□□ -1.5
SWC3YAL011W PDR1P12383 1068 aa5.65□□□□□ -1.5
SWC3YAL011W PKC1P24583 1151 aa5.65□□□□□ -1.5
SWC3YAL011W YKR023WP36119 530 aaKnown RBP5.65□□□□□ -1.5
SWC3YAL011W NNF1P47149 201 aa5.65□□□□□ -1.5
SWC3YAL011W SSA2P10592 639 aaKnown RBP5.64□□□□□ -1.51
SWC3YAL011W MPP10P47083 593 aaKnown RBP5.64□□□□□ -1.51
SWC3YAL011W ATF2P53296 535 aa5.64□□□□□ -1.51
SWC3YAL011W ATG32P40458 529 aa5.64□□□□□ -1.51
SWC3YAL011W KAR2P16474 682 aaKnown RBP5.63□□□□□ -1.51
SWC3YAL011W SUI2P20459 304 aaKnown RBP5.63□□□□□ -1.51
SWC3YAL011W CPS1P27614 576 aa5.63□□□□□ -1.51
SWC3YAL011W CST6P40535 587 aa5.63□□□□□ -1.51
SWC3YAL011W RRP46P53256 223 aaPredicted RBP5.63□□□□□ -1.51
SWC3YAL011W YNR029CP53729 429 aaKnown RBP5.63□□□□□ -1.51
SWC3YAL011W TY1B-NL2Q99337 1749 aaKnown RBP5.63□□□□□ -1.51
SWC3YAL011W LEU2P04173 364 aaPredicted RBP5.62□□□□□ -1.51
SWC3YAL011W TOM20P35180 183 aa5.62□□□□□ -1.51
SWC3YAL011W RTR1P40084 226 aaPredicted RBP5.62□□□□□ -1.51
SWC3YAL011W RPS0BP46654 252 aaKnown RBP5.62□□□□□ -1.51
SWC3YAL011W SVF1Q05515 481 aa5.62□□□□□ -1.51
SWC3YAL011W HIM1Q06674 414 aa5.62□□□□□ -1.51
SWC3YAL011W PDI1P17967 522 aaKnown RBP5.62□□□□□ -1.51
SWC3YAL011W NOB1Q08444 459 aaKnown RBP5.62□□□□□ -1.51
SWC3YAL011W MAK11P20484 414 aaKnown RBP5.61□□□□□ -1.51
SWC3YAL011W REF2P42073 533 aaPredicted RBP5.61□□□□□ -1.51
SWC3YAL011W YJL007CP47080 104 aa5.61□□□□□ -1.51
SWC3YAL011W PAP2P53632 584 aaKnown RBP5.61□□□□□ -1.51
SWC3YAL011W TAP42Q04372 366 aa5.61□□□□□ -1.51
SWC3YAL011W NOP53Q12080 455 aaKnown RBP5.61□□□□□ -1.51
SWC3YAL011W TY4B-HP0C2J7 1802 aa5.6□□□□□ -1.51
SWC3YAL011W TY4B-JP47024 1803 aa5.6□□□□□ -1.51
SWC3YAL011W TOA1P32773 286 aa5.6□□□□□ -1.51
SWC3YAL011W SIS2P36024 562 aa5.6□□□□□ -1.51
SWC3YAL011W TTI1P36097 1038 aa5.6□□□□□ -1.51
SWC3YAL011W FPR3P38911 411 aaKnown RBP5.6□□□□□ -1.51
SWC3YAL011W MTR4P47047 1073 aaKnown RBP5.6□□□□□ -1.51
SWC3YAL011W ZDS1P50111 915 aaKnown RBP5.6□□□□□ -1.51
SWC3YAL011W AUS1Q08409 1394 aa5.59□□□□□ -1.51
SWC3YAL011W MAK16P10962 306 aaPredicted RBP5.59□□□□□ -1.51
SWC3YAL011W STM1P39015 273 aaKnown RBP5.59□□□□□ -1.51
SWC3YAL011W SAP155P43612 1002 aa5.59□□□□□ -1.51
SWC3YAL011W RTF1P53064 558 aa5.59□□□□□ -1.51
SWC3YAL011W HAT1Q12341 374 aa5.59□□□□□ -1.51
SWC3YAL011W RPS24AP0CX31 135 aaKnown RBP5.58□□□□□ -1.52
SWC3YAL011W RPS24BP0CX32 135 aaKnown RBP5.58□□□□□ -1.52
SWC3YAL011W TIF1P10081 395 aaKnown RBP5.58□□□□□ -1.52
SWC3YAL011W TPD3P31383 635 aa5.58□□□□□ -1.52
SWC3YAL011W CSE4P36012 229 aa5.58□□□□□ -1.52
SWC3YAL011W RRP15Q06511 250 aaPredicted RBP5.58□□□□□ -1.52
SWC3YAL011W GAS4Q08271 471 aa5.58□□□□□ -1.52
SWC3YAL011W AI2P03876 854 aa5.58□□□□□ -1.52
SWC3YAL011W PRD1P25375 712 aa5.58□□□□□ -1.52
SWC3YAL011W SEC20P28791 383 aa5.58□□□□□ -1.52
SWC3YAL011W GRX4P32642 244 aa5.58□□□□□ -1.52
SWC3YAL011W RPL34BP40525 121 aaKnown RBP5.58□□□□□ -1.52
SWC3YAL011W THI22Q06490 572 aa5.58□□□□□ -1.52
SWC3YAL011W RRP14P36080 434 aaKnown RBP5.57□□□□□ -1.52
SWC3YAL011W ALD2P47771 506 aa5.57□□□□□ -1.52
SWC3YAL011W RNH70P53331 553 aa5.57□□□□□ -1.52
SWC3YAL011W YIL177CP40434 1758 aa5.57□□□□□ -1.52
SWC3YAL011W YJL225CP40889 1758 aa5.57□□□□□ -1.52
SWC3YAL011W NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.56□□□□□ -1.52not detected
SWC3YAL011W COX6P00427 148 aa5.56□□□□□ -1.52
SWC3YAL011W ERG12P07277 443 aa5.56□□□□□ -1.52
SWC3YAL011W RPC31P17890 251 aa5.56□□□□□ -1.52
SWC3YAL011W TPM2P40414 161 aa5.56□□□□□ -1.52
SWC3YAL011W BRE1Q07457 700 aaKnown RBP5.56□□□□□ -1.52
SWC3YAL011W DPS1P04802 557 aaKnown RBP5.55□□□□□ -1.52
SWC3YAL011W ADE6P38972 1358 aaKnown RBP5.55□□□□□ -1.52
SWC3YAL011W PRP43P53131 767 aaKnown RBP5.55□□□□□ -1.52
SWC3YAL011W RRP5Q05022 1729 aaKnown RBP5.55□□□□□ -1.52
SWC3YAL011W HIF1Q12373 385 aa5.55□□□□□ -1.52
SWC3YAL011W YOL098CQ12496 1037 aa5.55□□□□□ -1.52
SWC3YAL011W DCD1P06773 312 aa5.54□□□□□ -1.52
SWC3YAL011W DAL5P15365 543 aa5.54□□□□□ -1.52
SWC3YAL011W RCR1P38212 213 aa5.54□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms