RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 SOGA1O94964 1423 aa12.49□□□□□ -0.41
YBX3-206ENST00000536823 RGS20O76081 388 aa12.49□□□□□ -0.41
YBX3-206ENST00000536823 PTPN5P54829 565 aa12.49□□□□□ -0.41
YBX3-206ENST00000536823 KCNH8Q96L42 1107 aa12.48□□□□□ -0.41
YBX3-206ENST00000536823 WDR97A6NE52 1622 aa12.48□□□□□ -0.41
YBX3-206ENST00000536823 AQRO60306 1485 aaKnown RBP eCLIP12.47□□□□□ -0.411e-6■■■■□ 26.1
YBX3-206ENST00000536823 KCNK17Q96T54 332 aa12.46□□□□□ -0.41
YBX3-206ENST00000536823 IFFO2Q5TF58 517 aa12.44□□□□□ -0.42
YBX3-206ENST00000536823 TDRD9Q8NDG6 1382 aaKnown RBP12.43□□□□□ -0.42
YBX3-206ENST00000536823 PPP1R37O75864 691 aa12.41□□□□□ -0.42
YBX3-206ENST00000536823 VPS9D1Q9Y2B5 631 aa12.41□□□□□ -0.42
YBX3-206ENST00000536823 BIVM-ERCC5R4GMW8 1640 aa12.4□□□□□ -0.42
YBX3-206ENST00000536823 CHD1O14646 1710 aa12.4□□□□□ -0.42
YBX3-206ENST00000536823 WRNQ14191 1432 aaPredicted RBP eCLIP12.4□□□□□ -0.42
YBX3-206ENST00000536823 FOXK1P85037 733 aa12.4□□□□□ -0.42
YBX3-206ENST00000536823 PLPP6Q8IY26 295 aa12.4□□□□□ -0.42
YBX3-206ENST00000536823 ABCA10Q8WWZ4 1543 aa12.4□□□□□ -0.42
YBX3-206ENST00000536823 TOP2BQ02880 1626 aa12.4□□□□□ -0.42
YBX3-206ENST00000536823 A0A0G2JS52 829 aa12.39□□□□□ -0.43
YBX3-206ENST00000536823 TBC1D12O60347 775 aa12.39□□□□□ -0.43
YBX3-206ENST00000536823 GRIN2BQ13224 1484 aa12.39□□□□□ -0.43
YBX3-206ENST00000536823 SNAPC4Q5SXM2 1469 aa12.39□□□□□ -0.43
YBX3-206ENST00000536823 SYNJ1O43426 1573 aa12.39□□□□□ -0.43
YBX3-206ENST00000536823 MAGI1Q96QZ7 1491 aaPredicted RBP12.38□□□□□ -0.43
YBX3-206ENST00000536823 ABCA5Q8WWZ7 1642 aa12.37□□□□□ -0.43
YBX3-206ENST00000536823 GAPVD1Q14C86 1478 aa12.35□□□□□ -0.43
YBX3-206ENST00000536823 THSD4Q6ZMP0 1018 aa12.35□□□□□ -0.43
YBX3-206ENST00000536823 PBRM1Q86U86 1689 aa12.35□□□□□ -0.43
YBX3-206ENST00000536823 ECM2O94769 699 aaPredicted RBP12.34□□□□□ -0.43
YBX3-206ENST00000536823 RIMBP3CA6NJZ7 1639 aa12.33□□□□□ -0.44
YBX3-206ENST00000536823 RIMBP3BA6NNM3 1639 aa12.33□□□□□ -0.44
YBX3-206ENST00000536823 RIMBP3Q9UFD9 1639 aa12.33□□□□□ -0.44
YBX3-206ENST00000536823 GPHNQ9NQX3 736 aaPredicted RBP12.32□□□□□ -0.44
YBX3-206ENST00000536823 SYNJ2O15056 1496 aa12.32□□□□□ -0.44
YBX3-206ENST00000536823 ARHGEF11O15085 1522 aa12.32□□□□□ -0.44
YBX3-206ENST00000536823 GOLGA8CPA6NN73 597 aa12.31□□□□□ -0.44
YBX3-206ENST00000536823 DSG2Q14126 1118 aa12.31□□□□□ -0.44
YBX3-206ENST00000536823 SLC4A5Q9BY07 1137 aa12.3□□□□□ -0.44
YBX3-206ENST00000536823 AMER1Q5JTC6 1135 aaPredicted RBP12.29□□□□□ -0.44
YBX3-206ENST00000536823 ZNF454Q8N9F8 522 aa12.29□□□□□ -0.44
YBX3-206ENST00000536823 WNT2BQ93097 391 aa12.29□□□□□ -0.44
YBX3-206ENST00000536823 CLASP1Q7Z460 1538 aa12.28□□□□□ -0.44
YBX3-206ENST00000536823 BHMG1C9JSJ3 638 aaPredicted RBP12.28□□□□□ -0.44
YBX3-206ENST00000536823 CHMP7Q8WUX9 453 aaPredicted RBP12.28□□□□□ -0.44
YBX3-206ENST00000536823 BCL2L12Q9HB09 334 aa12.28□□□□□ -0.44
YBX3-206ENST00000536823 ADAMTS12P58397 1594 aa12.26□□□□□ -0.45
YBX3-206ENST00000536823 MRPL50Q8N5N7 158 aaKnown RBP12.26□□□□□ -0.45
YBX3-206ENST00000536823 RGL2O15211 777 aa12.25□□□□□ -0.45
YBX3-206ENST00000536823 ERICH3Q5RHP9 1530 aa12.25□□□□□ -0.45
YBX3-206ENST00000536823 PTPREP23469 700 aa12.23□□□□□ -0.45
YBX3-206ENST00000536823 GRIN2AQ12879 1464 aa12.22□□□□□ -0.45
YBX3-206ENST00000536823 FHAD1B1AJZ9 1412 aa12.22□□□□□ -0.45
YBX3-206ENST00000536823 UPF1Q92900 1129 aaKnown RBP eCLIP12.22□□□□□ -0.45
YBX3-206ENST00000536823 ZBED2Q9BTP6 218 aa12.22□□□□□ -0.45
YBX3-206ENST00000536823 RTN4Q9NQC3 1192 aaKnown RBP12.22□□□□□ -0.45
YBX3-206ENST00000536823 ARAP1Q96P48 1450 aa12.21□□□□□ -0.45
YBX3-206ENST00000536823 Q6ZNB5 142 aa12.21□□□□□ -0.45
YBX3-206ENST00000536823 OXER1Q8TDS5 423 aa12.21□□□□□ -0.45
YBX3-206ENST00000536823 NBPF3Q9H094 633 aa12.19□□□□□ -0.46
YBX3-206ENST00000536823 NUP160Q12769 1436 aa12.19□□□□□ -0.46
YBX3-206ENST00000536823 FOSBP53539 338 aa12.17□□□□□ -0.46
YBX3-206ENST00000536823 CEP170Q5SW79 1584 aa12.17□□□□□ -0.46
YBX3-206ENST00000536823 KIF27Q86VH2 1401 aa12.15□□□□□ -0.46
YBX3-206ENST00000536823 CYB5RLQ6IPT4 315 aa12.14□□□□□ -0.47
YBX3-206ENST00000536823 ITGBL1O95965 494 aaPredicted RBP12.13□□□□□ -0.47
YBX3-206ENST00000536823 PKD2Q13563 968 aa12.12□□□□□ -0.47
YBX3-206ENST00000536823 CUL7Q14999 1698 aa12.12□□□□□ -0.47
YBX3-206ENST00000536823 SHROOM2Q13796 1616 aa12.11□□□□□ -0.47
YBX3-206ENST00000536823 IGF1RP08069 1367 aa12.1□□□□□ -0.47
YBX3-206ENST00000536823 JPH4Q96JJ6 628 aa12.1□□□□□ -0.47
YBX3-206ENST00000536823 ANKK1Q8NFD2 765 aa12.09□□□□□ -0.47
YBX3-206ENST00000536823 ZDHHC16Q969W1 377 aa12.09□□□□□ -0.47
YBX3-206ENST00000536823 RUSC2Q8N2Y8 1516 aa12.08□□□□□ -0.48
YBX3-206ENST00000536823 ADAM33Q9BZ11 813 aa12.08□□□□□ -0.48
YBX3-206ENST00000536823 ERCC6L2Q5T890 1561 aa12.08□□□□□ -0.48
YBX3-206ENST00000536823 PPP1R15BQ5SWA1 713 aa12.06□□□□□ -0.48
YBX3-206ENST00000536823 ANO8Q9HCE9 1232 aaPredicted RBP12.04□□□□□ -0.48
YBX3-206ENST00000536823 CARMIL1Q5VZK9 1371 aa12.04□□□□□ -0.48
YBX3-206ENST00000536823 BCAMP50895 628 aa12.03□□□□□ -0.48
YBX3-206ENST00000536823 KIAA0586Q9BVV6 1533 aa12.02□□□□□ -0.48
YBX3-206ENST00000536823 EVI5O60447 810 aa12.02□□□□□ -0.49
YBX3-206ENST00000536823 CRISPLD2Q9H0B8 497 aa12.02□□□□□ -0.49
YBX3-206ENST00000536823 RABGEF1Q9UJ41 708 aa12.02□□□□□ -0.49
YBX3-206ENST00000536823 PRG4Q92954 1404 aaPredicted RBP12.02□□□□□ -0.49
YBX3-206ENST00000536823 PPP1R3GB7ZBB8 358 aa12.01□□□□□ -0.49
YBX3-206ENST00000536823 LAPTM4AQ15012 233 aa12□□□□□ -0.49
YBX3-206ENST00000536823 HS6ST3Q8IZP7 471 aa12□□□□□ -0.49
YBX3-206ENST00000536823 KCNC4Q03721 635 aa11.99□□□□□ -0.49
YBX3-206ENST00000536823 PROX2Q3B8N5 592 aa11.99□□□□□ -0.49
YBX3-206ENST00000536823 NYAP1Q6ZVC0 841 aa11.99□□□□□ -0.49
YBX3-206ENST00000536823 SOWAHBA6NEL2 793 aa11.98□□□□□ -0.49
YBX3-206ENST00000536823 RAPGEF2Q9Y4G8 1499 aa11.95□□□□□ -0.5
YBX3-206ENST00000536823 LAPTM4BQ86VI4 370 aa11.95□□□□□ -0.5
YBX3-206ENST00000536823 IQGAP2Q13576 1575 aa11.95□□□□□ -0.5
YBX3-206ENST00000536823 LCE2BO14633 110 aa11.94□□□□□ -0.5
YBX3-206ENST00000536823 TRAF7Q6Q0C0 670 aa11.94□□□□□ -0.5
YBX3-206ENST00000536823 WBP1LQ9NX94 342 aa11.94□□□□□ -0.5
YBX3-206ENST00000536823 COL9A1P20849 921 aa11.92□□□□□ -0.5
YBX3-206ENST00000536823 ZFRQ96KR1 1074 aaKnown RBP11.92□□□□□ -0.5
YBX3-206ENST00000536823 GFRA3O60609 400 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms