RNA–Protein interactions for RNA: ENSMUST00000105490.2

Prdm1-202, Transcript of PR domain zinc finger protein 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Prdm1, Length 4,025 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm1-202ENSMUST00000105490 Tspyl2Q7TQI8 677 aa13.24□□□□□ -0.29
Prdm1-202ENSMUST00000105490 Top2aQ01320 1528 aaKnown RBP13.24□□□□□ -0.29
Prdm1-202ENSMUST00000105490 Ssh1Q76I79 1042 aa13.24□□□□□ -0.29
Prdm1-202ENSMUST00000105490 U2af1Q9D883 239 aaKnown RBP13.24□□□□□ -0.29
Prdm1-202ENSMUST00000105490 Irx6Q9ER75 438 aa13.24□□□□□ -0.29
Prdm1-202ENSMUST00000105490 Kif16bB1AVY7 1312 aa13.24□□□□□ -0.29
Prdm1-202ENSMUST00000105490 Ush1cQ9ES64 910 aa13.23□□□□□ -0.29
Prdm1-202ENSMUST00000105490 Pdia4P08003 638 aaKnown RBP13.23□□□□□ -0.29
Prdm1-202ENSMUST00000105490 Stk24Q99KH8 431 aa13.23□□□□□ -0.29
Prdm1-202ENSMUST00000105490 Chmp4cQ9D7F7 232 aa13.23□□□□□ -0.29
Prdm1-202ENSMUST00000105490 Iqgap2Q3UQ44 1575 aa13.23□□□□□ -0.29
Prdm1-202ENSMUST00000105490 Rabep1O35551 862 aa13.22□□□□□ -0.29
Prdm1-202ENSMUST00000105490 Vps8Q0P5W1 1427 aa13.22□□□□□ -0.29
Prdm1-202ENSMUST00000105490 Becn1O88597 448 aa13.22□□□□□ -0.29
Prdm1-202ENSMUST00000105490 Plin1Q8CGN5 517 aa13.22□□□□□ -0.29
Prdm1-202ENSMUST00000105490 PtprkP35822 1457 aa13.22□□□□□ -0.29
Prdm1-202ENSMUST00000105490 Srpk2O54781 681 aaKnown RBP13.22□□□□□ -0.29
Prdm1-202ENSMUST00000105490 Rock2P70336 1388 aa13.22□□□□□ -0.29
Prdm1-202ENSMUST00000105490 Rnf214Q8BFU3 668 aaKnown RBP13.21□□□□□ -0.29
Prdm1-202ENSMUST00000105490 Arhgef5E9Q7D5 1581 aa13.21□□□□□ -0.3
Prdm1-202ENSMUST00000105490 Ylpm1Q9R0I7 1386 aaKnown RBP13.21□□□□□ -0.3
Prdm1-202ENSMUST00000105490 Zscan10Q3URR7 782 aa13.21□□□□□ -0.3
Prdm1-202ENSMUST00000105490 Rsph3aQ3UFY4 516 aa13.2□□□□□ -0.3
Prdm1-202ENSMUST00000105490 Ccdc146E9Q9F7 977 aa13.2□□□□□ -0.3
Prdm1-202ENSMUST00000105490 Srcin1Q9QWI6 1250 aa13.2□□□□□ -0.3
Prdm1-202ENSMUST00000105490 Nkx1-2P42580 305 aa13.19□□□□□ -0.3
Prdm1-202ENSMUST00000105490 Stard8Q8K031 1019 aa13.19□□□□□ -0.3
Prdm1-202ENSMUST00000105490 AqrQ8CFQ3 1481 aaKnown RBP13.19□□□□□ -0.3
Prdm1-202ENSMUST00000105490 Kiaa0754Q69ZZ9 979 aa13.18□□□□□ -0.3
Prdm1-202ENSMUST00000105490 TimelessQ9R1X4 1197 aa13.18□□□□□ -0.3
Prdm1-202ENSMUST00000105490 Hsp90b1P08113 802 aaKnown RBP13.16□□□□□ -0.3
Prdm1-202ENSMUST00000105490 Sptbn5F6UCX4 1208 aa13.16□□□□□ -0.3
Prdm1-202ENSMUST00000105490 Mcm4P49717 862 aa13.16□□□□□ -0.3
Prdm1-202ENSMUST00000105490 Nutm1Q8BHP2 1126 aa13.16□□□□□ -0.3
Prdm1-202ENSMUST00000105490 Exosc9Q9JHI7 438 aaKnown RBP13.16□□□□□ -0.3
Prdm1-202ENSMUST00000105490 Top2bQ64511 1612 aa13.16□□□□□ -0.3
Prdm1-202ENSMUST00000105490 Ercc6F8VPZ5 1481 aa13.15□□□□□ -0.3
Prdm1-202ENSMUST00000105490 U2surpQ6NV83 1029 aaKnown RBP13.15□□□□□ -0.3
Prdm1-202ENSMUST00000105490 Fam13bQ8K2H3 851 aa13.15□□□□□ -0.3
Prdm1-202ENSMUST00000105490 Trim58Q5NCC9 485 aa13.14□□□□□ -0.31
Prdm1-202ENSMUST00000105490 Dhx9O70133 1380 aaKnown RBP13.14□□□□□ -0.31
Prdm1-202ENSMUST00000105490 Nup155Q99P88 1391 aaKnown RBP13.14□□□□□ -0.31
Prdm1-202ENSMUST00000105490 Naip5Q9R016 1403 aa13.14□□□□□ -0.31
Prdm1-202ENSMUST00000105490 Carmil1Q6EDY6 1374 aa13.14□□□□□ -0.31
Prdm1-202ENSMUST00000105490 Ppp1r9bQ6R891 817 aaKnown RBP13.13□□□□□ -0.31
Prdm1-202ENSMUST00000105490 Kif7B7ZNG0 1348 aa13.13□□□□□ -0.31
Prdm1-202ENSMUST00000105490 Q4VA45 678 aa13.13□□□□□ -0.31
Prdm1-202ENSMUST00000105490 Ppp2r3aB2RXC8 1150 aa13.12□□□□□ -0.31
Prdm1-202ENSMUST00000105490 Plekhg5Q66T02 1073 aa13.12□□□□□ -0.31
Prdm1-202ENSMUST00000105490 Stag3O70576 1240 aa13.12□□□□□ -0.31
Prdm1-202ENSMUST00000105490 Smc5Q8CG46 1101 aaKnown RBP13.11□□□□□ -0.31
Prdm1-202ENSMUST00000105490 Ncoa1P70365 1447 aa13.11□□□□□ -0.31
Prdm1-202ENSMUST00000105490 Plekhh1Q80TI1 1356 aa13.11□□□□□ -0.31
Prdm1-202ENSMUST00000105490 TchhA0A0B4J1F9 1599 aa13.11□□□□□ -0.31
Prdm1-202ENSMUST00000105490 Ccdc60Q8C4J0 545 aa13.11□□□□□ -0.31
Prdm1-202ENSMUST00000105490 Plekhh2Q8C115 1491 aa13.11□□□□□ -0.31
Prdm1-202ENSMUST00000105490 Erbb3Q61526 1339 aa13.11□□□□□ -0.31
Prdm1-202ENSMUST00000105490 Tpm2P58774 284 aa13.1□□□□□ -0.31
Prdm1-202ENSMUST00000105490 Nol12Q8BG17 217 aa13.1□□□□□ -0.31
Prdm1-202ENSMUST00000105490 Gtf2e1Q9D0D5 440 aa13.1□□□□□ -0.31
Prdm1-202ENSMUST00000105490 Trim30aP15533 496 aa13.1□□□□□ -0.31
Prdm1-202ENSMUST00000105490 Nectin2P32507 530 aa13.1□□□□□ -0.31
Prdm1-202ENSMUST00000105490 Fam184bQ0KK56 942 aa13.1□□□□□ -0.31
Prdm1-202ENSMUST00000105490 Tiam1Q60610 1591 aa13.1□□□□□ -0.31
Prdm1-202ENSMUST00000105490 Chrna2Q91X60 512 aa13.1□□□□□ -0.31
Prdm1-202ENSMUST00000105490 Cux2P70298 1426 aa13.09□□□□□ -0.31
Prdm1-202ENSMUST00000105490 Casq1O09165 405 aa13.09□□□□□ -0.31
Prdm1-202ENSMUST00000105490 Ccar1Q8CH18 1146 aaKnown RBP13.09□□□□□ -0.31
Prdm1-202ENSMUST00000105490 Kank1E9Q238 1360 aa13.08□□□□□ -0.32
Prdm1-202ENSMUST00000105490 Dusp27Q148W8 1138 aa13.08□□□□□ -0.32
Prdm1-202ENSMUST00000105490 Ppp2r1aQ76MZ3 589 aa13.08□□□□□ -0.32
Prdm1-202ENSMUST00000105490 PogkQ80TC5 607 aa13.08□□□□□ -0.32
Prdm1-202ENSMUST00000105490 CgnP59242 1191 aa13.08□□□□□ -0.32
Prdm1-202ENSMUST00000105490 Il4rP16382 810 aa13.07□□□□□ -0.32
Prdm1-202ENSMUST00000105490 Pibf1E9Q6K3 756 aa13.07□□□□□ -0.32
Prdm1-202ENSMUST00000105490 Vgll3P85442 326 aa13.07□□□□□ -0.32
Prdm1-202ENSMUST00000105490 Fan1Q69ZT1 1020 aa13.07□□□□□ -0.32
Prdm1-202ENSMUST00000105490 Cog6Q8R3I3 657 aa13.06□□□□□ -0.32
Prdm1-202ENSMUST00000105490 Kif20aP97329 887 aa13.06□□□□□ -0.32
Prdm1-202ENSMUST00000105490 Ralbp1Q62172 648 aa13.06□□□□□ -0.32
Prdm1-202ENSMUST00000105490 Tsen2Q6P7W5 460 aa13.06□□□□□ -0.32
Prdm1-202ENSMUST00000105490 Soga1E1U8D0 1418 aa13.05□□□□□ -0.32
Prdm1-202ENSMUST00000105490 Apaf1O88879 1249 aa13.05□□□□□ -0.32
Prdm1-202ENSMUST00000105490 Tomm22Q9CPQ3 142 aa13.05□□□□□ -0.32
Prdm1-202ENSMUST00000105490 3425401B19RikD3Z1D3 1412 aa13.05□□□□□ -0.32
Prdm1-202ENSMUST00000105490 Nek4Q9Z1J2 792 aa13.05□□□□□ -0.32
Prdm1-202ENSMUST00000105490 Cc2d1aQ8K1A6 943 aa13.04□□□□□ -0.32
Prdm1-202ENSMUST00000105490 Stk26Q99JT2 416 aa13.04□□□□□ -0.32
Prdm1-202ENSMUST00000105490 Tfip11Q9ERA6 838 aaKnown RBP13.04□□□□□ -0.32
Prdm1-202ENSMUST00000105490 NgefQ8CHT1 710 aa13.03□□□□□ -0.32
Prdm1-202ENSMUST00000105490 Ttll5Q8CHB8 1328 aa13.03□□□□□ -0.32
Prdm1-202ENSMUST00000105490 Naip2Q9QUK4 1447 aa13.03□□□□□ -0.32
Prdm1-202ENSMUST00000105490 IqubQ8CDK3 788 aa13.03□□□□□ -0.32
Prdm1-202ENSMUST00000105490 Efcab5A0JP43 1406 aa13.02□□□□□ -0.32
Prdm1-202ENSMUST00000105490 Catsper2A2ARP9 588 aa13.02□□□□□ -0.32
Prdm1-202ENSMUST00000105490 GsdmaQ9EST1 446 aa13.02□□□□□ -0.33
Prdm1-202ENSMUST00000105490 Utp3Q9JI13 469 aaKnown RBP13.02□□□□□ -0.33
Prdm1-202ENSMUST00000105490 Ift140E9PY46 1464 aa13.01□□□□□ -0.33
Prdm1-202ENSMUST00000105490 Polr3gQ6NXY9 223 aa13.01□□□□□ -0.33
Prdm1-202ENSMUST00000105490 Atxn3Q9CVD2 355 aa13.01□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 56 ms