RNA–Protein interactions for RNA: ENSMUST00000105490.2

Prdm1-202, Transcript of PR domain zinc finger protein 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Prdm1, Length 4,025 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm1-202ENSMUST00000105490 Rhox8Q6VSS7 320 aa18.34■□□□□ 0.53
Prdm1-202ENSMUST00000105490 Ehmt2Q9Z148 1263 aaKnown RBP17.78■□□□□ 0.44
Prdm1-202ENSMUST00000105490 Rpgrip1Q9EPQ2 1331 aa17.64■□□□□ 0.41
Prdm1-202ENSMUST00000105490 Acin1Q9JIX8 1338 aaKnown RBP16.93■□□□□ 0.3
Prdm1-202ENSMUST00000105490 Pcgf6Q99NA9 353 aa16.86■□□□□ 0.29
Prdm1-202ENSMUST00000105490 Zeb1Q64318 1117 aa16.8■□□□□ 0.28
Prdm1-202ENSMUST00000105490 Las1lA2BE28 776 aaKnown RBP16.73■□□□□ 0.27
Prdm1-202ENSMUST00000105490 Ccdc136Q3TVA9 1136 aa16.65■□□□□ 0.26
Prdm1-202ENSMUST00000105490 NischQ80TM9 1593 aa16.6■□□□□ 0.25
Prdm1-202ENSMUST00000105490 Supt5hO55201 1082 aaKnown RBP16.49■□□□□ 0.23
Prdm1-202ENSMUST00000105490 Wdr66E9Q743 1299 aa16.48■□□□□ 0.23
Prdm1-202ENSMUST00000105490 Gab3Q8BSM5 595 aa16.31■□□□□ 0.2
Prdm1-202ENSMUST00000105490 Trim41Q5NCC3 630 aa16.3■□□□□ 0.2
Prdm1-202ENSMUST00000105490 Cngb1E1AZ71 1325 aa16.3■□□□□ 0.2
Prdm1-202ENSMUST00000105490 Neurod1Q60867 357 aa16.22■□□□□ 0.19
Prdm1-202ENSMUST00000105490 Ppargc1bQ8VHJ7 1014 aa16.13■□□□□ 0.17
Prdm1-202ENSMUST00000105490 CenpbP27790 599 aa16.12■□□□□ 0.17
Prdm1-202ENSMUST00000105490 Ccdc180J3QNE4 1664 aa16.1■□□□□ 0.17
Prdm1-202ENSMUST00000105490 HrcG5E8J6 738 aa15.96■□□□□ 0.14
Prdm1-202ENSMUST00000105490 NefmP08553 848 aa15.94■□□□□ 0.14
Prdm1-202ENSMUST00000105490 Gm38655A0A286YDK6 273 aa15.93■□□□□ 0.14
Prdm1-202ENSMUST00000105490 Abcc9P70170 1546 aa15.91■□□□□ 0.14
Prdm1-202ENSMUST00000105490 Cdk11bP24788 784 aaKnown RBP15.9■□□□□ 0.14
Prdm1-202ENSMUST00000105490 Csrnp3P59055 597 aa15.9■□□□□ 0.14
Prdm1-202ENSMUST00000105490 UbtfP25976 765 aaKnown RBP15.87■□□□□ 0.13
Prdm1-202ENSMUST00000105490 Nop58Q6DFW4 536 aaKnown RBP15.82■□□□□ 0.12
Prdm1-202ENSMUST00000105490 Sall2Q9QX96 1004 aa15.78■□□□□ 0.12
Prdm1-202ENSMUST00000105490 Rtl1Q7M732 1744 aa15.75■□□□□ 0.11
Prdm1-202ENSMUST00000105490 1700123L14RikQ3V2K7 440 aa15.74■□□□□ 0.11
Prdm1-202ENSMUST00000105490 DiexfQ8BTT6 772 aaKnown RBP15.72■□□□□ 0.11
Prdm1-202ENSMUST00000105490 Gm35339A0A140LHH9 1649 aa15.71■□□□□ 0.11
Prdm1-202ENSMUST00000105490 Myt1Q8CFC2 1127 aa15.7■□□□□ 0.1
Prdm1-202ENSMUST00000105490 Myt1lP97500 1187 aa15.69■□□□□ 0.1
Prdm1-202ENSMUST00000105490 Mier1Q5UAK0 511 aa15.69■□□□□ 0.1
Prdm1-202ENSMUST00000105490 Ttbk1Q6PCN3 1308 aa15.63■□□□□ 0.09
Prdm1-202ENSMUST00000105490 Esf1Q3V1V3 845 aaKnown RBP15.63■□□□□ 0.09
Prdm1-202ENSMUST00000105490 Abcc8B2RUS7 1588 aa15.61■□□□□ 0.09
Prdm1-202ENSMUST00000105490 Anks4bQ8K3X6 423 aa15.6■□□□□ 0.09
Prdm1-202ENSMUST00000105490 Slc24a1Q91WD8 1130 aa15.56■□□□□ 0.08
Prdm1-202ENSMUST00000105490 Pelp1Q9DBD5 1123 aaKnown RBP15.56■□□□□ 0.08
Prdm1-202ENSMUST00000105490 Dcaf1Q80TR8 1506 aa15.52■□□□□ 0.07
Prdm1-202ENSMUST00000105490 Amer1Q7TS75 1132 aa15.48■□□□□ 0.07
Prdm1-202ENSMUST00000105490 Npm2Q80W85 207 aa15.41■□□□□ 0.06
Prdm1-202ENSMUST00000105490 Aplp2Q06335 707 aa15.4■□□□□ 0.06
Prdm1-202ENSMUST00000105490 Mapk8ip2Q9ERE9 830 aa15.37■□□□□ 0.05
Prdm1-202ENSMUST00000105490 Ube2uB1AUC4 352 aa15.35■□□□□ 0.05
Prdm1-202ENSMUST00000105490 ClspnQ80YR7 1315 aa15.33■□□□□ 0.04
Prdm1-202ENSMUST00000105490 Aebp2Q9Z248 504 aaKnown RBP15.31■□□□□ 0.04
Prdm1-202ENSMUST00000105490 TonslQ6NZL6 1363 aa15.29■□□□□ 0.04
Prdm1-202ENSMUST00000105490 Tnnt3Q9QZ47 272 aa15.25■□□□□ 0.03
Prdm1-202ENSMUST00000105490 Ap3b1Q9Z1T1 1105 aa15.25■□□□□ 0.03
Prdm1-202ENSMUST00000105490 Fam71e1A1L3C1 212 aa15.21■□□□□ 0.03
Prdm1-202ENSMUST00000105490 Eif5bQ05D44 1216 aaKnown RBP15.21■□□□□ 0.02
Prdm1-202ENSMUST00000105490 Stra8P70278 393 aa15.18■□□□□ 0.02
Prdm1-202ENSMUST00000105490 Bcl11aQ9QYE3 773 aa15.17■□□□□ 0.02
Prdm1-202ENSMUST00000105490 Chic1Q8CBW7 227 aa15.16■□□□□ 0.02
Prdm1-202ENSMUST00000105490 Eid3Q3V124 375 aa15.14■□□□□ 0.01
Prdm1-202ENSMUST00000105490 SafbD3YXK2 937 aaKnown RBP15.12■□□□□ 0.01
Prdm1-202ENSMUST00000105490 NclP09405 707 aaKnown RBP15.11■□□□□ 0.01
Prdm1-202ENSMUST00000105490 Anp32aO35381 247 aa15.07■□□□□ 0
Prdm1-202ENSMUST00000105490 Zcchc6Q5BLK4 1491 aaKnown RBP15.07■□□□□ 0
Prdm1-202ENSMUST00000105490 Plekhg3Q4VAC9 1341 aa15.05■□□□□ 0
Prdm1-202ENSMUST00000105490 4933416C03RikQ3V063 378 aa15.03■□□□□ -0
Prdm1-202ENSMUST00000105490 Fam50aQ9WV03 339 aaKnown RBP15□□□□□ -0.01
Prdm1-202ENSMUST00000105490 Cep164Q5DU05 1446 aa15□□□□□ -0.01
Prdm1-202ENSMUST00000105490 Hnrnpul2Q00PI9 745 aaKnown RBP14.98□□□□□ -0.01
Prdm1-202ENSMUST00000105490 Rtl5Q5DTT4 599 aa14.88□□□□□ -0.03
Prdm1-202ENSMUST00000105490 Calr4Q3TQS0 420 aa14.84□□□□□ -0.03
Prdm1-202ENSMUST00000105490 Ppp4r2Q0VGB7 417 aa14.84□□□□□ -0.03
Prdm1-202ENSMUST00000105490 NrdcQ8BHG1 1161 aa14.82□□□□□ -0.04
Prdm1-202ENSMUST00000105490 Il27Q8K3I6 234 aa14.82□□□□□ -0.04
Prdm1-202ENSMUST00000105490 PrkcshO08795 521 aa14.79□□□□□ -0.04
Prdm1-202ENSMUST00000105490 DaxxO35613 739 aa14.78□□□□□ -0.04
Prdm1-202ENSMUST00000105490 Ifnlr1Q8CGK5 535 aa14.74□□□□□ -0.05
Prdm1-202ENSMUST00000105490 Lmod2Q3UHZ5 550 aa14.67□□□□□ -0.06
Prdm1-202ENSMUST00000105490 Wdr43Q6ZQL4 677 aaKnown RBP14.65□□□□□ -0.06
Prdm1-202ENSMUST00000105490 P3h3Q8CG70 732 aa14.64□□□□□ -0.07
Prdm1-202ENSMUST00000105490 Rsf1E9PWW9 1441 aaKnown RBP14.6□□□□□ -0.07
Prdm1-202ENSMUST00000105490 Clip1Q922J3 1391 aa14.58□□□□□ -0.07
Prdm1-202ENSMUST00000105490 NeflP08551 543 aa14.57□□□□□ -0.08
Prdm1-202ENSMUST00000105490 Rb1cc1Q9ESK9 1588 aa14.55□□□□□ -0.08
Prdm1-202ENSMUST00000105490 Nolc1E9Q5C9 702 aaKnown RBP14.51□□□□□ -0.09
Prdm1-202ENSMUST00000105490 Mrs2Q5NCE8 434 aa14.51□□□□□ -0.09
Prdm1-202ENSMUST00000105490 Slc4a3P16283 1227 aa14.5□□□□□ -0.09
Prdm1-202ENSMUST00000105490 ArxO35085 564 aa14.5□□□□□ -0.09
Prdm1-202ENSMUST00000105490 Supt16hQ920B9 1047 aa14.48□□□□□ -0.09
Prdm1-202ENSMUST00000105490 Zbtb4Q5F293 982 aa14.45□□□□□ -0.1
Prdm1-202ENSMUST00000105490 ScribQ80U72 1612 aa14.43□□□□□ -0.1
Prdm1-202ENSMUST00000105490 Hsp90aa1P07901 733 aaKnown RBP14.41□□□□□ -0.1
Prdm1-202ENSMUST00000105490 Ccdc27Q3V036 639 aa14.38□□□□□ -0.11
Prdm1-202ENSMUST00000105490 Ccdc88bQ4QRL3 1481 aa14.38□□□□□ -0.11
Prdm1-202ENSMUST00000105490 Kdm5dQ62240 1548 aa14.37□□□□□ -0.11
Prdm1-202ENSMUST00000105490 Anp32bQ9EST5 272 aaKnown RBP14.37□□□□□ -0.11
Prdm1-202ENSMUST00000105490 Zbtb7cQ8VCZ7 619 aa14.35□□□□□ -0.11
Prdm1-202ENSMUST00000105490 NacadQ5SWP3 1504 aa14.32□□□□□ -0.12
Prdm1-202ENSMUST00000105490 Hdac5Q9Z2V6 1113 aa14.32□□□□□ -0.12
Prdm1-202ENSMUST00000105490 Brd4Q9ESU6 1400 aaKnown RBP14.32□□□□□ -0.12
Prdm1-202ENSMUST00000105490 Irx3P81067 507 aa14.3□□□□□ -0.12
Prdm1-202ENSMUST00000105490 Baz1aO88379 1555 aa14.3□□□□□ -0.12
Prdm1-202ENSMUST00000105490 Rad21Q61550 635 aaKnown RBP14.29□□□□□ -0.12
Retrieved 100 of 22,080 RNA–protein pairs in 13.4 ms