RNA–Protein interactions for RNA: ENSMUST00000060479.13

Ush2a-201, Transcript of Usherin, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ush2a, Length 15,695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2a-201ENSMUST00000060479 Plin1Q8CGN5 517 aa6.48□□□□□ -1.37
Ush2a-201ENSMUST00000060479 Rtn4Q99P72 1162 aaKnown RBP6.48□□□□□ -1.37
Ush2a-201ENSMUST00000060479 Phf14Q9D4H9 881 aa6.48□□□□□ -1.37
Ush2a-201ENSMUST00000060479 Hsp90b1P08113 802 aaKnown RBP6.48□□□□□ -1.37
Ush2a-201ENSMUST00000060479 G3bp1P97855 465 aaKnown RBP6.48□□□□□ -1.37
Ush2a-201ENSMUST00000060479 Ecm2Q5FW85 670 aa6.48□□□□□ -1.37
Ush2a-201ENSMUST00000060479 Cgnl1Q6AW69 1298 aa6.48□□□□□ -1.37
Ush2a-201ENSMUST00000060479 Becn1O88597 448 aa6.48□□□□□ -1.37
Ush2a-201ENSMUST00000060479 MccE9PWI3 1003 aa6.48□□□□□ -1.37
Ush2a-201ENSMUST00000060479 Kif3bQ61771 747 aa6.47□□□□□ -1.37
Ush2a-201ENSMUST00000060479 Adam1bQ8R534 806 aa6.47□□□□□ -1.37
Ush2a-201ENSMUST00000060479 Senp3Q9EP97 568 aaKnown RBP6.47□□□□□ -1.37
Ush2a-201ENSMUST00000060479 KarsQ99MN1 595 aaKnown RBP6.47□□□□□ -1.37
Ush2a-201ENSMUST00000060479 Kif16bB1AVY7 1312 aa6.47□□□□□ -1.37
Ush2a-201ENSMUST00000060479 Eif4g2Q62448 906 aaKnown RBP6.47□□□□□ -1.37
Ush2a-201ENSMUST00000060479 Egfem1Q8C088 590 aa6.47□□□□□ -1.37
Ush2a-201ENSMUST00000060479 Ccdc60Q8C4J0 545 aa6.46□□□□□ -1.37
Ush2a-201ENSMUST00000060479 Kdm5dQ62240 1548 aa6.46□□□□□ -1.37
Ush2a-201ENSMUST00000060479 Ush1cQ9ES64 910 aa6.46□□□□□ -1.38
Ush2a-201ENSMUST00000060479 Rock1P70335 1354 aa6.46□□□□□ -1.38
Ush2a-201ENSMUST00000060479 Glipr1l2Q9CQ35 332 aa6.46□□□□□ -1.38
Ush2a-201ENSMUST00000060479 Arid3cA6PWV5 409 aa6.46□□□□□ -1.38
Ush2a-201ENSMUST00000060479 Znf326O88291 580 aa6.46□□□□□ -1.38
Ush2a-201ENSMUST00000060479 Cux2P70298 1426 aa6.45□□□□□ -1.38
Ush2a-201ENSMUST00000060479 Ppp2r3aB2RXC8 1150 aa6.45□□□□□ -1.38
Ush2a-201ENSMUST00000060479 UacaQ8CGB3 1411 aa6.45□□□□□ -1.38
Ush2a-201ENSMUST00000060479 Jph4Q80WT0 628 aa6.45□□□□□ -1.38
Ush2a-201ENSMUST00000060479 Lemd3Q9WU40 921 aa6.45□□□□□ -1.38
Ush2a-201ENSMUST00000060479 Smc5Q8CG46 1101 aaKnown RBP6.44□□□□□ -1.38
Ush2a-201ENSMUST00000060479 Kif7B7ZNG0 1348 aa6.44□□□□□ -1.38
Ush2a-201ENSMUST00000060479 MsnP26041 577 aaKnown RBP6.44□□□□□ -1.38
Ush2a-201ENSMUST00000060479 Tnpo1Q8BFY9 898 aaKnown RBP6.44□□□□□ -1.38
Ush2a-201ENSMUST00000060479 Ccdc146E9Q9F7 977 aa6.44□□□□□ -1.38
Ush2a-201ENSMUST00000060479 Casq1O09165 405 aa6.44□□□□□ -1.38
Ush2a-201ENSMUST00000060479 Tspyl2Q7TQI8 677 aa6.44□□□□□ -1.38
Ush2a-201ENSMUST00000060479 Rtf1A2AQ19 715 aaKnown RBP6.44□□□□□ -1.38
Ush2a-201ENSMUST00000060479 Pds5bQ4VA53 1446 aaKnown RBP6.44□□□□□ -1.38
Ush2a-201ENSMUST00000060479 Fam163aQ8CAA5 168 aa6.44□□□□□ -1.38
Ush2a-201ENSMUST00000060479 Sycp2Q9CUU3 1500 aa6.44□□□□□ -1.38
Ush2a-201ENSMUST00000060479 Prdm16A2A935 1275 aa6.44□□□□□ -1.38
Ush2a-201ENSMUST00000060479 Ankrd36D3Z4K0 1415 aa6.44□□□□□ -1.38
Ush2a-201ENSMUST00000060479 Tnnt2P50752 301 aa6.44□□□□□ -1.38
Ush2a-201ENSMUST00000060479 Atp6v1dP57746 247 aa6.43□□□□□ -1.38
Ush2a-201ENSMUST00000060479 SkilQ60665 675 aa6.43□□□□□ -1.38
Ush2a-201ENSMUST00000060479 Phldb1Q6PDH0 1371 aaKnown RBP6.43□□□□□ -1.38
Ush2a-201ENSMUST00000060479 Gtf3c5Q8R2T8 520 aa6.43□□□□□ -1.38
Ush2a-201ENSMUST00000060479 Birc3O08863 600 aa6.43□□□□□ -1.38
Ush2a-201ENSMUST00000060479 Cald1E9QA15 768 aaKnown RBP6.43□□□□□ -1.38
Ush2a-201ENSMUST00000060479 CenpjQ569L8 1344 aa6.43□□□□□ -1.38
Ush2a-201ENSMUST00000060479 Puf60Q3UEB3 564 aaKnown RBP6.43□□□□□ -1.38
Ush2a-201ENSMUST00000060479 Znf316Q6PGE4 1016 aa6.43□□□□□ -1.38
Ush2a-201ENSMUST00000060479 Dhx9O70133 1380 aaKnown RBP6.43□□□□□ -1.38
Ush2a-201ENSMUST00000060479 NgefQ8CHT1 710 aa6.43□□□□□ -1.38
Ush2a-201ENSMUST00000060479 Cetn4Q8K4K1 168 aa6.43□□□□□ -1.38
Ush2a-201ENSMUST00000060479 Apaf1O88879 1249 aa6.43□□□□□ -1.38
Ush2a-201ENSMUST00000060479 Dhx57Q6P5D3 1388 aaKnown RBP6.42□□□□□ -1.38
Ush2a-201ENSMUST00000060479 Ncapd3Q6ZQK0 1506 aa6.42□□□□□ -1.38
Ush2a-201ENSMUST00000060479 PnnO35691 725 aaKnown RBP6.42□□□□□ -1.38
Ush2a-201ENSMUST00000060479 CgnP59242 1191 aa6.42□□□□□ -1.38
Ush2a-201ENSMUST00000060479 Tdrd9Q14BI7 1383 aa6.41□□□□□ -1.38
Ush2a-201ENSMUST00000060479 Pcmtd1P59913 357 aa6.41□□□□□ -1.38
Ush2a-201ENSMUST00000060479 Ciz1Q8VEH2 845 aa6.41□□□□□ -1.38
Ush2a-201ENSMUST00000060479 Gtf2a1Q99PM3 378 aa6.41□□□□□ -1.38
Ush2a-201ENSMUST00000060479 Efcab5A0JP43 1406 aa6.41□□□□□ -1.38
Ush2a-201ENSMUST00000060479 Nek4Q9Z1J2 792 aa6.41□□□□□ -1.38
Ush2a-201ENSMUST00000060479 Il16O54824 1322 aa6.41□□□□□ -1.38
Ush2a-201ENSMUST00000060479 Sptbn5F6UCX4 1208 aa6.41□□□□□ -1.38
Ush2a-201ENSMUST00000060479 St18Q80TY4 1045 aa6.41□□□□□ -1.38
Ush2a-201ENSMUST00000060479 Gpatch11Q3UFS4 262 aa6.41□□□□□ -1.38
Ush2a-201ENSMUST00000060479 Q3TQI7 289 aaKnown RBP6.4□□□□□ -1.38
Ush2a-201ENSMUST00000060479 Safb2Q80YR5 991 aaKnown RBP6.4□□□□□ -1.38
Ush2a-201ENSMUST00000060479 Spag9Q58A65 1321 aaKnown RBP6.4□□□□□ -1.38
Ush2a-201ENSMUST00000060479 Nectin2P32507 530 aa6.4□□□□□ -1.38
Ush2a-201ENSMUST00000060479 Dusp27Q148W8 1138 aa6.4□□□□□ -1.38
Ush2a-201ENSMUST00000060479 Pde3bQ61409 1100 aa6.4□□□□□ -1.38
Ush2a-201ENSMUST00000060479 Gripap1Q8VD04 806 aa6.4□□□□□ -1.39
Ush2a-201ENSMUST00000060479 Pibf1E9Q6K3 756 aa6.4□□□□□ -1.39
Ush2a-201ENSMUST00000060479 1700010I14RikQ7TPG0 532 aa6.4□□□□□ -1.39
Ush2a-201ENSMUST00000060479 Nutm1Q8BHP2 1126 aa6.4□□□□□ -1.39
Ush2a-201ENSMUST00000060479 Ppp1r9bQ6R891 817 aaKnown RBP6.39□□□□□ -1.39
Ush2a-201ENSMUST00000060479 Cog6Q8R3I3 657 aa6.39□□□□□ -1.39
Ush2a-201ENSMUST00000060479 Swt1Q9DBQ9 907 aa6.39□□□□□ -1.39
Ush2a-201ENSMUST00000060479 Smarce1O54941 411 aaKnown RBP6.39□□□□□ -1.39
Ush2a-201ENSMUST00000060479 Utp14aQ640M1 767 aaKnown RBP6.39□□□□□ -1.39
Ush2a-201ENSMUST00000060479 Tnnt1O88346 262 aa6.39□□□□□ -1.39
Ush2a-201ENSMUST00000060479 Paxip1Q6NZQ4 1056 aa6.39□□□□□ -1.39
Ush2a-201ENSMUST00000060479 Pes1Q9EQ61 584 aaKnown RBP6.39□□□□□ -1.39
Ush2a-201ENSMUST00000060479 Ssh1Q76I79 1042 aa6.39□□□□□ -1.39
Ush2a-201ENSMUST00000060479 Gm973E9Q295 1059 aa6.39□□□□□ -1.39
Ush2a-201ENSMUST00000060479 Tpm2P58774 284 aa6.39□□□□□ -1.39
Ush2a-201ENSMUST00000060479 Kif18aQ91WD7 886 aa6.39□□□□□ -1.39
Ush2a-201ENSMUST00000060479 Vps8Q0P5W1 1427 aa6.38□□□□□ -1.39
Ush2a-201ENSMUST00000060479 Isy1Q69ZQ2 285 aaKnown RBP6.38□□□□□ -1.39
Ush2a-201ENSMUST00000060479 Rbm25B2RY56 838 aaKnown RBP6.38□□□□□ -1.39
Ush2a-201ENSMUST00000060479 Triml2E9PW10 424 aa6.38□□□□□ -1.39
Ush2a-201ENSMUST00000060479 Kif20aP97329 887 aa6.38□□□□□ -1.39
Ush2a-201ENSMUST00000060479 Ric3Q8BPM6 367 aa6.38□□□□□ -1.39
Ush2a-201ENSMUST00000060479 Tfip11Q9ERA6 838 aaKnown RBP6.38□□□□□ -1.39
Ush2a-201ENSMUST00000060479 MecomP14404 1042 aa6.38□□□□□ -1.39
Ush2a-201ENSMUST00000060479 Mcm2P97310 904 aa6.37□□□□□ -1.39
Retrieved 100 of 22,080 RNA–protein pairs in 19.1 ms