RNA–Protein interactions for RNA: ENSMUST00000060479.13

Ush2a-201, Transcript of Usherin, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ush2a, Length 15,695 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2a-201ENSMUST00000060479 Rhox8Q6VSS7 320 aa9,1□□□□□ -0,95
Ush2a-201ENSMUST00000060479 Rpgrip1Q9EPQ2 1331 aa8,61□□□□□ -1,03
Ush2a-201ENSMUST00000060479 Ehmt2Q9Z148 1263 aaKnown RBP8,43□□□□□ -1,06
Ush2a-201ENSMUST00000060479 Ccdc136Q3TVA9 1136 aa8,26□□□□□ -1,09
Ush2a-201ENSMUST00000060479 Acin1Q9JIX8 1338 aaKnown RBP8,17□□□□□ -1,1
Ush2a-201ENSMUST00000060479 Las1lA2BE28 776 aaKnown RBP8,14□□□□□ -1,11
Ush2a-201ENSMUST00000060479 HrcG5E8J6 738 aa8,09□□□□□ -1,11
Ush2a-201ENSMUST00000060479 Trim41Q5NCC3 630 aa8,06□□□□□ -1,12
Ush2a-201ENSMUST00000060479 Zeb1Q64318 1117 aa8,05□□□□□ -1,12
Ush2a-201ENSMUST00000060479 Pcgf6Q99NA9 353 aa8,02□□□□□ -1,13
Ush2a-201ENSMUST00000060479 Gab3Q8BSM5 595 aa8,02□□□□□ -1,13
Ush2a-201ENSMUST00000060479 Cngb1E1AZ71 1325 aa7,98□□□□□ -1,13
Ush2a-201ENSMUST00000060479 Wdr66E9Q743 1299 aa7,96□□□□□ -1,13
Ush2a-201ENSMUST00000060479 NefmP08553 848 aa7,95□□□□□ -1,14
Ush2a-201ENSMUST00000060479 Esf1Q3V1V3 845 aaKnown RBP7,9□□□□□ -1,14
Ush2a-201ENSMUST00000060479 Pelp1Q9DBD5 1123 aaKnown RBP7,89□□□□□ -1,15
Ush2a-201ENSMUST00000060479 Supt5hO55201 1082 aaKnown RBP7,83□□□□□ -1,16
Ush2a-201ENSMUST00000060479 UbtfP25976 765 aaKnown RBP7,79□□□□□ -1,16
Ush2a-201ENSMUST00000060479 CenpbP27790 599 aa7,79□□□□□ -1,16
Ush2a-201ENSMUST00000060479 NischQ80TM9 1593 aa7,77□□□□□ -1,17
Ush2a-201ENSMUST00000060479 Myt1lP97500 1187 aa7,76□□□□□ -1,17
Ush2a-201ENSMUST00000060479 Cdk11bP24788 784 aaKnown RBP7,74□□□□□ -1,17
Ush2a-201ENSMUST00000060479 Npm2Q80W85 207 aa7,73□□□□□ -1,17
Ush2a-201ENSMUST00000060479 Mier1Q5UAK0 511 aa7,68□□□□□ -1,18
Ush2a-201ENSMUST00000060479 Myt1Q8CFC2 1127 aa7,66□□□□□ -1,18
Ush2a-201ENSMUST00000060479 Amer1Q7TS75 1132 aa7,65□□□□□ -1,18
Ush2a-201ENSMUST00000060479 Nop58Q6DFW4 536 aaKnown RBP7,64□□□□□ -1,19
Ush2a-201ENSMUST00000060479 Ube2uB1AUC4 352 aa7,64□□□□□ -1,19
Ush2a-201ENSMUST00000060479 Neurod1Q60867 357 aa7,64□□□□□ -1,19
Ush2a-201ENSMUST00000060479 Ppargc1bQ8VHJ7 1014 aa7,61□□□□□ -1,19
Ush2a-201ENSMUST00000060479 DiexfQ8BTT6 772 aaKnown RBP7,61□□□□□ -1,19
Ush2a-201ENSMUST00000060479 Anks4bQ8K3X6 423 aa7,57□□□□□ -1,2
Ush2a-201ENSMUST00000060479 Tnnt3Q9QZ47 272 aa7,55□□□□□ -1,2
Ush2a-201ENSMUST00000060479 Stra8P70278 393 aa7,55□□□□□ -1,2
Ush2a-201ENSMUST00000060479 Sall2Q9QX96 1004 aa7,53□□□□□ -1,2
Ush2a-201ENSMUST00000060479 Slc24a1Q91WD8 1130 aa7,5□□□□□ -1,21
Ush2a-201ENSMUST00000060479 Csrnp3P59055 597 aa7,48□□□□□ -1,21
Ush2a-201ENSMUST00000060479 Chic1Q8CBW7 227 aa7,46□□□□□ -1,22
Ush2a-201ENSMUST00000060479 TonslQ6NZL6 1363 aa7,46□□□□□ -1,22
Ush2a-201ENSMUST00000060479 ClspnQ80YR7 1315 aa7,46□□□□□ -1,22
Ush2a-201ENSMUST00000060479 NclP09405 707 aaKnown RBP7,45□□□□□ -1,22
Ush2a-201ENSMUST00000060479 Ap3b1Q9Z1T1 1105 aa7,44□□□□□ -1,22
Ush2a-201ENSMUST00000060479 Aplp2Q06335 707 aa7,44□□□□□ -1,22
Ush2a-201ENSMUST00000060479 4930567H17RikQ3V0K5 233 aa7,42□□□□□ -1,22
Ush2a-201ENSMUST00000060479 Il27Q8K3I6 234 aa7,42□□□□□ -1,22
Ush2a-201ENSMUST00000060479 1700123L14RikQ3V2K7 440 aa7,39□□□□□ -1,23
Ush2a-201ENSMUST00000060479 Fam50aQ9WV03 339 aaKnown RBP7,38□□□□□ -1,23
Ush2a-201ENSMUST00000060479 Gm38655A0A286YDK6 273 aa7,37□□□□□ -1,23
Ush2a-201ENSMUST00000060479 NrdcQ8BHG1 1161 aa7,36□□□□□ -1,23
Ush2a-201ENSMUST00000060479 Eif5bQ05D44 1216 aaKnown RBP7,36□□□□□ -1,23
Ush2a-201ENSMUST00000060479 Aebp2Q9Z248 504 aaKnown RBP7,35□□□□□ -1,23
Ush2a-201ENSMUST00000060479 Dcaf1Q80TR8 1506 aa7,35□□□□□ -1,23
Ush2a-201ENSMUST00000060479 Ttbk1Q6PCN3 1308 aa7,34□□□□□ -1,23
Ush2a-201ENSMUST00000060479 Anp32aO35381 247 aa7,33□□□□□ -1,24
Ush2a-201ENSMUST00000060479 Eid3Q3V124 375 aa7,33□□□□□ -1,24
Ush2a-201ENSMUST00000060479 Plekhg3Q4VAC9 1341 aa7,33□□□□□ -1,24
Ush2a-201ENSMUST00000060479 Mapk8ip2Q9ERE9 830 aa7,32□□□□□ -1,24
Ush2a-201ENSMUST00000060479 Rtl5Q5DTT4 599 aa7,32□□□□□ -1,24
Ush2a-201ENSMUST00000060479 Zcchc6Q5BLK4 1491 aaKnown RBP7,28□□□□□ -1,24
Ush2a-201ENSMUST00000060479 4933416C03RikQ3V063 378 aa7,27□□□□□ -1,25
Ush2a-201ENSMUST00000060479 Ccdc180J3QNE4 1664 aa7,24□□□□□ -1,25
Ush2a-201ENSMUST00000060479 Lmod2Q3UHZ5 550 aa7,24□□□□□ -1,25
Ush2a-201ENSMUST00000060479 Bcl11aQ9QYE3 773 aa7,23□□□□□ -1,25
Ush2a-201ENSMUST00000060479 Abcc9P70170 1546 aa7,22□□□□□ -1,25
Ush2a-201ENSMUST00000060479 Clip1Q922J3 1391 aa7,22□□□□□ -1,25
Ush2a-201ENSMUST00000060479 Anp32bQ9EST5 272 aaKnown RBP7,22□□□□□ -1,25
Ush2a-201ENSMUST00000060479 Abcc8B2RUS7 1588 aa7,21□□□□□ -1,26
Ush2a-201ENSMUST00000060479 Calr4Q3TQS0 420 aa7,2□□□□□ -1,26
Ush2a-201ENSMUST00000060479 NeflP08551 543 aa7,2□□□□□ -1,26
Ush2a-201ENSMUST00000060479 Ccer2J3QPU5 274 aa7,19□□□□□ -1,26
Ush2a-201ENSMUST00000060479 Cep164Q5DU05 1446 aa7,19□□□□□ -1,26
Ush2a-201ENSMUST00000060479 Ppp4r2Q0VGB7 417 aa7,19□□□□□ -1,26
Ush2a-201ENSMUST00000060479 Fam71e1A1L3C1 212 aa7,17□□□□□ -1,26
Ush2a-201ENSMUST00000060479 Rtl1Q7M732 1744 aa7,17□□□□□ -1,26
Ush2a-201ENSMUST00000060479 Npm1Q61937 292 aaKnown RBP7,14□□□□□ -1,27
Ush2a-201ENSMUST00000060479 Brd4Q9ESU6 1400 aaKnown RBP7,1□□□□□ -1,27
Ush2a-201ENSMUST00000060479 SafbD3YXK2 937 aaKnown RBP7,09□□□□□ -1,27
Ush2a-201ENSMUST00000060479 Hnrnpul2Q00PI9 745 aaKnown RBP7,09□□□□□ -1,28
Ush2a-201ENSMUST00000060479 Wdr43Q6ZQL4 677 aaKnown RBP7,08□□□□□ -1,28
Ush2a-201ENSMUST00000060479 DaxxO35613 739 aa7,08□□□□□ -1,28
Ush2a-201ENSMUST00000060479 Mrs2Q5NCE8 434 aa7,07□□□□□ -1,28
Ush2a-201ENSMUST00000060479 Ccdc9Q8VC31 543 aaKnown RBP7,04□□□□□ -1,28
Ush2a-201ENSMUST00000060479 Chic2Q9D9G3 165 aa7,04□□□□□ -1,28
Ush2a-201ENSMUST00000060479 Zbtb7cQ8VCZ7 619 aa7,02□□□□□ -1,29
Ush2a-201ENSMUST00000060479 P3h3Q8CG70 732 aa7,02□□□□□ -1,29
Ush2a-201ENSMUST00000060479 Os9Q8K2C7 672 aa7,01□□□□□ -1,29
Ush2a-201ENSMUST00000060479 BlmO88700 1416 aa7,01□□□□□ -1,29
Ush2a-201ENSMUST00000060479 PrkcshO08795 521 aa7,01□□□□□ -1,29
Ush2a-201ENSMUST00000060479 Rsf1E9PWW9 1441 aaKnown RBP7,01□□□□□ -1,29
Ush2a-201ENSMUST00000060479 Zbtb4Q5F293 982 aa7□□□□□ -1,29
Ush2a-201ENSMUST00000060479 Hsp90aa1P07901 733 aaKnown RBP6,99□□□□□ -1,29
Ush2a-201ENSMUST00000060479 Rad21Q61550 635 aaKnown RBP6,99□□□□□ -1,29
Ush2a-201ENSMUST00000060479 Upf2A2AT37 1269 aaKnown RBP6,98□□□□□ -1,29
Ush2a-201ENSMUST00000060479 Hspa5P20029 655 aaKnown RBP6,98□□□□□ -1,29
Ush2a-201ENSMUST00000060479 Ubl4bQ9CQ84 188 aa6,98□□□□□ -1,29
Ush2a-201ENSMUST00000060479 Gm13697A2AK42 830 aa6,98□□□□□ -1,29
Ush2a-201ENSMUST00000060479 Ccdc27Q3V036 639 aa6,96□□□□□ -1,29
Ush2a-201ENSMUST00000060479 Nlrp6Q91WS2 869 aa6,96□□□□□ -1,3
Ush2a-201ENSMUST00000060479 Ofd1Q80Z25 1017 aa6,95□□□□□ -1,3
Ush2a-201ENSMUST00000060479 Slc4a3P16283 1227 aa6,95□□□□□ -1,3
Retrieved 100 of 22,080 RNA–protein pairs in 12,4 ms