RNA–Protein interactions for RNA: ENSMUST00000060479.13

Ush2a-201, Transcript of Usherin, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ush2a, Length 15,695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2a-201ENSMUST00000060479 Rhox8Q6VSS7 320 aa9.1□□□□□ -0.95
Ush2a-201ENSMUST00000060479 Rpgrip1Q9EPQ2 1331 aa8.61□□□□□ -1.03
Ush2a-201ENSMUST00000060479 Ehmt2Q9Z148 1263 aaKnown RBP8.43□□□□□ -1.06
Ush2a-201ENSMUST00000060479 Ccdc136Q3TVA9 1136 aa8.26□□□□□ -1.09
Ush2a-201ENSMUST00000060479 Acin1Q9JIX8 1338 aaKnown RBP8.17□□□□□ -1.1
Ush2a-201ENSMUST00000060479 Las1lA2BE28 776 aaKnown RBP8.14□□□□□ -1.11
Ush2a-201ENSMUST00000060479 HrcG5E8J6 738 aa8.09□□□□□ -1.11
Ush2a-201ENSMUST00000060479 Trim41Q5NCC3 630 aa8.06□□□□□ -1.12
Ush2a-201ENSMUST00000060479 Zeb1Q64318 1117 aa8.05□□□□□ -1.12
Ush2a-201ENSMUST00000060479 Pcgf6Q99NA9 353 aa8.02□□□□□ -1.13
Ush2a-201ENSMUST00000060479 Gab3Q8BSM5 595 aa8.02□□□□□ -1.13
Ush2a-201ENSMUST00000060479 Cngb1E1AZ71 1325 aa7.98□□□□□ -1.13
Ush2a-201ENSMUST00000060479 Wdr66E9Q743 1299 aa7.96□□□□□ -1.13
Ush2a-201ENSMUST00000060479 NefmP08553 848 aa7.95□□□□□ -1.14
Ush2a-201ENSMUST00000060479 Esf1Q3V1V3 845 aaKnown RBP7.9□□□□□ -1.14
Ush2a-201ENSMUST00000060479 Pelp1Q9DBD5 1123 aaKnown RBP7.89□□□□□ -1.15
Ush2a-201ENSMUST00000060479 Supt5hO55201 1082 aaKnown RBP7.83□□□□□ -1.16
Ush2a-201ENSMUST00000060479 UbtfP25976 765 aaKnown RBP7.79□□□□□ -1.16
Ush2a-201ENSMUST00000060479 CenpbP27790 599 aa7.79□□□□□ -1.16
Ush2a-201ENSMUST00000060479 NischQ80TM9 1593 aa7.77□□□□□ -1.17
Ush2a-201ENSMUST00000060479 Myt1lP97500 1187 aa7.76□□□□□ -1.17
Ush2a-201ENSMUST00000060479 Cdk11bP24788 784 aaKnown RBP7.74□□□□□ -1.17
Ush2a-201ENSMUST00000060479 Npm2Q80W85 207 aa7.73□□□□□ -1.17
Ush2a-201ENSMUST00000060479 Mier1Q5UAK0 511 aa7.68□□□□□ -1.18
Ush2a-201ENSMUST00000060479 Myt1Q8CFC2 1127 aa7.66□□□□□ -1.18
Ush2a-201ENSMUST00000060479 Amer1Q7TS75 1132 aa7.65□□□□□ -1.18
Ush2a-201ENSMUST00000060479 Nop58Q6DFW4 536 aaKnown RBP7.64□□□□□ -1.19
Ush2a-201ENSMUST00000060479 Ube2uB1AUC4 352 aa7.64□□□□□ -1.19
Ush2a-201ENSMUST00000060479 Neurod1Q60867 357 aa7.64□□□□□ -1.19
Ush2a-201ENSMUST00000060479 Ppargc1bQ8VHJ7 1014 aa7.61□□□□□ -1.19
Ush2a-201ENSMUST00000060479 DiexfQ8BTT6 772 aaKnown RBP7.61□□□□□ -1.19
Ush2a-201ENSMUST00000060479 Anks4bQ8K3X6 423 aa7.57□□□□□ -1.2
Ush2a-201ENSMUST00000060479 Tnnt3Q9QZ47 272 aa7.55□□□□□ -1.2
Ush2a-201ENSMUST00000060479 Stra8P70278 393 aa7.55□□□□□ -1.2
Ush2a-201ENSMUST00000060479 Sall2Q9QX96 1004 aa7.53□□□□□ -1.2
Ush2a-201ENSMUST00000060479 Slc24a1Q91WD8 1130 aa7.5□□□□□ -1.21
Ush2a-201ENSMUST00000060479 Csrnp3P59055 597 aa7.48□□□□□ -1.21
Ush2a-201ENSMUST00000060479 Chic1Q8CBW7 227 aa7.46□□□□□ -1.22
Ush2a-201ENSMUST00000060479 TonslQ6NZL6 1363 aa7.46□□□□□ -1.22
Ush2a-201ENSMUST00000060479 ClspnQ80YR7 1315 aa7.46□□□□□ -1.22
Ush2a-201ENSMUST00000060479 NclP09405 707 aaKnown RBP7.45□□□□□ -1.22
Ush2a-201ENSMUST00000060479 Ap3b1Q9Z1T1 1105 aa7.44□□□□□ -1.22
Ush2a-201ENSMUST00000060479 Aplp2Q06335 707 aa7.44□□□□□ -1.22
Ush2a-201ENSMUST00000060479 4930567H17RikQ3V0K5 233 aa7.42□□□□□ -1.22
Ush2a-201ENSMUST00000060479 Il27Q8K3I6 234 aa7.42□□□□□ -1.22
Ush2a-201ENSMUST00000060479 1700123L14RikQ3V2K7 440 aa7.39□□□□□ -1.23
Ush2a-201ENSMUST00000060479 Fam50aQ9WV03 339 aaKnown RBP7.38□□□□□ -1.23
Ush2a-201ENSMUST00000060479 Gm38655A0A286YDK6 273 aa7.37□□□□□ -1.23
Ush2a-201ENSMUST00000060479 NrdcQ8BHG1 1161 aa7.36□□□□□ -1.23
Ush2a-201ENSMUST00000060479 Eif5bQ05D44 1216 aaKnown RBP7.36□□□□□ -1.23
Ush2a-201ENSMUST00000060479 Aebp2Q9Z248 504 aaKnown RBP7.35□□□□□ -1.23
Ush2a-201ENSMUST00000060479 Dcaf1Q80TR8 1506 aa7.35□□□□□ -1.23
Ush2a-201ENSMUST00000060479 Ttbk1Q6PCN3 1308 aa7.34□□□□□ -1.23
Ush2a-201ENSMUST00000060479 Anp32aO35381 247 aa7.33□□□□□ -1.24
Ush2a-201ENSMUST00000060479 Eid3Q3V124 375 aa7.33□□□□□ -1.24
Ush2a-201ENSMUST00000060479 Plekhg3Q4VAC9 1341 aa7.33□□□□□ -1.24
Ush2a-201ENSMUST00000060479 Mapk8ip2Q9ERE9 830 aa7.32□□□□□ -1.24
Ush2a-201ENSMUST00000060479 Rtl5Q5DTT4 599 aa7.32□□□□□ -1.24
Ush2a-201ENSMUST00000060479 Zcchc6Q5BLK4 1491 aaKnown RBP7.28□□□□□ -1.24
Ush2a-201ENSMUST00000060479 4933416C03RikQ3V063 378 aa7.27□□□□□ -1.25
Ush2a-201ENSMUST00000060479 Ccdc180J3QNE4 1664 aa7.24□□□□□ -1.25
Ush2a-201ENSMUST00000060479 Lmod2Q3UHZ5 550 aa7.24□□□□□ -1.25
Ush2a-201ENSMUST00000060479 Bcl11aQ9QYE3 773 aa7.23□□□□□ -1.25
Ush2a-201ENSMUST00000060479 Abcc9P70170 1546 aa7.22□□□□□ -1.25
Ush2a-201ENSMUST00000060479 Clip1Q922J3 1391 aa7.22□□□□□ -1.25
Ush2a-201ENSMUST00000060479 Anp32bQ9EST5 272 aaKnown RBP7.22□□□□□ -1.25
Ush2a-201ENSMUST00000060479 Abcc8B2RUS7 1588 aa7.21□□□□□ -1.26
Ush2a-201ENSMUST00000060479 Calr4Q3TQS0 420 aa7.2□□□□□ -1.26
Ush2a-201ENSMUST00000060479 NeflP08551 543 aa7.2□□□□□ -1.26
Ush2a-201ENSMUST00000060479 Ccer2J3QPU5 274 aa7.19□□□□□ -1.26
Ush2a-201ENSMUST00000060479 Cep164Q5DU05 1446 aa7.19□□□□□ -1.26
Ush2a-201ENSMUST00000060479 Ppp4r2Q0VGB7 417 aa7.19□□□□□ -1.26
Ush2a-201ENSMUST00000060479 Fam71e1A1L3C1 212 aa7.17□□□□□ -1.26
Ush2a-201ENSMUST00000060479 Rtl1Q7M732 1744 aa7.17□□□□□ -1.26
Ush2a-201ENSMUST00000060479 Npm1Q61937 292 aaKnown RBP7.14□□□□□ -1.27
Ush2a-201ENSMUST00000060479 Brd4Q9ESU6 1400 aaKnown RBP7.1□□□□□ -1.27
Ush2a-201ENSMUST00000060479 SafbD3YXK2 937 aaKnown RBP7.09□□□□□ -1.27
Ush2a-201ENSMUST00000060479 Hnrnpul2Q00PI9 745 aaKnown RBP7.09□□□□□ -1.28
Ush2a-201ENSMUST00000060479 Wdr43Q6ZQL4 677 aaKnown RBP7.08□□□□□ -1.28
Ush2a-201ENSMUST00000060479 DaxxO35613 739 aa7.08□□□□□ -1.28
Ush2a-201ENSMUST00000060479 Mrs2Q5NCE8 434 aa7.07□□□□□ -1.28
Ush2a-201ENSMUST00000060479 Ccdc9Q8VC31 543 aaKnown RBP7.04□□□□□ -1.28
Ush2a-201ENSMUST00000060479 Chic2Q9D9G3 165 aa7.04□□□□□ -1.28
Ush2a-201ENSMUST00000060479 Zbtb7cQ8VCZ7 619 aa7.02□□□□□ -1.29
Ush2a-201ENSMUST00000060479 P3h3Q8CG70 732 aa7.02□□□□□ -1.29
Ush2a-201ENSMUST00000060479 Os9Q8K2C7 672 aa7.01□□□□□ -1.29
Ush2a-201ENSMUST00000060479 BlmO88700 1416 aa7.01□□□□□ -1.29
Ush2a-201ENSMUST00000060479 PrkcshO08795 521 aa7.01□□□□□ -1.29
Ush2a-201ENSMUST00000060479 Rsf1E9PWW9 1441 aaKnown RBP7.01□□□□□ -1.29
Ush2a-201ENSMUST00000060479 Zbtb4Q5F293 982 aa7□□□□□ -1.29
Ush2a-201ENSMUST00000060479 Hsp90aa1P07901 733 aaKnown RBP6.99□□□□□ -1.29
Ush2a-201ENSMUST00000060479 Rad21Q61550 635 aaKnown RBP6.99□□□□□ -1.29
Ush2a-201ENSMUST00000060479 Upf2A2AT37 1269 aaKnown RBP6.98□□□□□ -1.29
Ush2a-201ENSMUST00000060479 Hspa5P20029 655 aaKnown RBP6.98□□□□□ -1.29
Ush2a-201ENSMUST00000060479 Ubl4bQ9CQ84 188 aa6.98□□□□□ -1.29
Ush2a-201ENSMUST00000060479 Gm13697A2AK42 830 aa6.98□□□□□ -1.29
Ush2a-201ENSMUST00000060479 Ccdc27Q3V036 639 aa6.96□□□□□ -1.29
Ush2a-201ENSMUST00000060479 Nlrp6Q91WS2 869 aa6.96□□□□□ -1.3
Ush2a-201ENSMUST00000060479 Ofd1Q80Z25 1017 aa6.95□□□□□ -1.3
Ush2a-201ENSMUST00000060479 Slc4a3P16283 1227 aa6.95□□□□□ -1.3
Retrieved 100 of 22,080 RNA–protein pairs in 15 ms