RNA–Protein interactions for RNA: YPL173W

MRPL40, Transcript of Mitochondrial ribosomal protein of the large subunit, yeastyeast

Gene MRPL40, Length 894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MRPL40YPL173W MMS21P38632 267 aa2.51□□□□□ -2.01
MRPL40YPL173W SMF2P38778 549 aa2.51□□□□□ -2.01
MRPL40YPL173W BAT1P38891 393 aaKnown RBP2.51□□□□□ -2.01
MRPL40YPL173W UTP25P40498 721 aaKnown RBP2.51□□□□□ -2.01
MRPL40YPL173W YGL185CP53100 379 aa2.51□□□□□ -2.01
MRPL40YPL173W CLD1P53264 445 aa2.51□□□□□ -2.01
MRPL40YPL173W YGR168CP53293 376 aa2.51□□□□□ -2.01
MRPL40YPL173W PXR1P53335 271 aaPredicted RBP2.51□□□□□ -2.01
MRPL40YPL173W REX2P54964 269 aaKnown RBP2.51□□□□□ -2.01
MRPL40YPL173W EGD1Q02642 157 aaKnown RBP2.51□□□□□ -2.01
MRPL40YPL173W TRM82Q03774 444 aa2.51□□□□□ -2.01
MRPL40YPL173W YMR111CQ04461 462 aaPredicted RBP2.51□□□□□ -2.01
MRPL40YPL173W ERV41Q04651 352 aa2.51□□□□□ -2.01
MRPL40YPL173W BUR2Q05949 395 aa2.51□□□□□ -2.01
MRPL40YPL173W YLR413WQ06689 675 aa2.51□□□□□ -2.01
MRPL40YPL173W YDL109CQ12103 647 aa2.51□□□□□ -2.01
MRPL40YPL173W FRE8Q12209 686 aa2.51□□□□□ -2.01
MRPL40YPL173W MRPL23Q12487 163 aaPredicted RBP2.51□□□□□ -2.01
MRPL40YPL173W DCP1Q12517 231 aaPredicted RBP2.51□□□□□ -2.01
MRPL40YPL173W HTZ1Q12692 134 aaKnown RBP2.51□□□□□ -2.01
MRPL40YPL173W UBA3Q99344 299 aa2.51□□□□□ -2.01
MRPL40YPL173W SUP35P05453 685 aaKnown RBP2.5□□□□□ -2.01
MRPL40YPL173W GAL7P08431 366 aa2.5□□□□□ -2.01
MRPL40YPL173W PMT2P31382 759 aa2.5□□□□□ -2.01
MRPL40YPL173W VMA5P31412 392 aaKnown RBP2.5□□□□□ -2.01
MRPL40YPL173W HXT1P32465 570 aa2.5□□□□□ -2.01
MRPL40YPL173W EBP2P36049 427 aaKnown RBP2.5□□□□□ -2.01
MRPL40YPL173W YFR057WP43625 151 aa2.5□□□□□ -2.01
MRPL40YPL173W LOH1P47055 219 aa2.5□□□□□ -2.01
MRPL40YPL173W BIR1P47134 954 aa2.5□□□□□ -2.01
MRPL40YPL173W RPN14P53196 417 aa2.5□□□□□ -2.01
MRPL40YPL173W VOA1P53262 265 aa2.5□□□□□ -2.01
MRPL40YPL173W ALF1P53904 254 aa2.5□□□□□ -2.01
MRPL40YPL173W SUR7P54003 302 aa2.5□□□□□ -2.01
MRPL40YPL173W RVB1Q03940 463 aaKnown RBP2.5□□□□□ -2.01
MRPL40YPL173W DNL4Q08387 944 aaPredicted RBP2.5□□□□□ -2.01
MRPL40YPL173W RRG7Q08774 242 aaPredicted RBP2.5□□□□□ -2.01
MRPL40YPL173W HRT3Q12347 344 aa2.5□□□□□ -2.01
MRPL40YPL173W YIL002W-AQ3E7Z5 69 aa2.5□□□□□ -2.01
MRPL40YPL173W SAR1P20606 190 aaKnown RBP2.49□□□□□ -2.01
MRPL40YPL173W MEK1P24719 497 aaPredicted RBP2.49□□□□□ -2.01
MRPL40YPL173W ACB1P31787 87 aa2.49□□□□□ -2.01
MRPL40YPL173W RAD23P32628 398 aaKnown RBP2.49□□□□□ -2.01
MRPL40YPL173W YKL070WP36087 169 aa2.49□□□□□ -2.01
MRPL40YPL173W DTR1P38125 572 aa2.49□□□□□ -2.01
MRPL40YPL173W LSM12P38828 187 aaKnown RBP2.49□□□□□ -2.01
MRPL40YPL173W VPS45P38932 577 aa2.49□□□□□ -2.01
MRPL40YPL173W AIM10P39965 576 aaKnown RBP2.49□□□□□ -2.01
MRPL40YPL173W YER186CP40101 306 aa2.49□□□□□ -2.01
MRPL40YPL173W MPP10P47083 593 aaKnown RBP2.49□□□□□ -2.01
MRPL40YPL173W MKC7P53379 596 aa2.49□□□□□ -2.01
MRPL40YPL173W VAC7P53950 1165 aa2.49□□□□□ -2.01
MRPL40YPL173W SKI8Q02793 397 aaPredicted RBP2.49□□□□□ -2.01
MRPL40YPL173W UBX2Q04228 584 aa2.49□□□□□ -2.01
MRPL40YPL173W ATP16Q12165 160 aa2.49□□□□□ -2.01
MRPL40YPL173W SFM1Q12314 213 aa2.49□□□□□ -2.01
MRPL40YPL173W NAG1Q8TGN9 163 aa2.49□□□□□ -2.01
MRPL40YPL173W RPS14AP06367 137 aaKnown RBP2.48□□□□□ -2.01
MRPL40YPL173W MIR1P23641 311 aaKnown RBP2.48□□□□□ -2.01
MRPL40YPL173W RPS14BP39516 138 aaKnown RBP2.48□□□□□ -2.01
MRPL40YPL173W MIG3P39943 394 aa2.48□□□□□ -2.01
MRPL40YPL173W OXA1P39952 402 aa2.48□□□□□ -2.01
MRPL40YPL173W YNL208WP40159 199 aaKnown RBP2.48□□□□□ -2.01
MRPL40YPL173W GAB1P41733 394 aa2.48□□□□□ -2.01
MRPL40YPL173W OKP1P53298 406 aa2.48□□□□□ -2.01
MRPL40YPL173W BIO4P53630 237 aa2.48□□□□□ -2.01
MRPL40YPL173W SCS7Q03529 384 aa2.48□□□□□ -2.01
MRPL40YPL173W YMR027WQ04371 470 aa2.48□□□□□ -2.01
MRPL40YPL173W APC4Q04601 652 aa2.48□□□□□ -2.01
MRPL40YPL173W DDC1Q08949 612 aa2.48□□□□□ -2.01
MRPL40YPL173W TAF10Q12030 206 aa2.48□□□□□ -2.01
MRPL40YPL173W RBD2Q12270 262 aa2.48□□□□□ -2.01
MRPL40YPL173W LDB17Q12342 491 aa2.48□□□□□ -2.01
MRPL40YPL173W APC2Q12440 853 aa2.48□□□□□ -2.01
MRPL40YPL173W GIT1P25346 518 aa2.47□□□□□ -2.01
MRPL40YPL173W LDB16P25587 256 aa2.47□□□□□ -2.01
MRPL40YPL173W RPL5P26321 297 aaKnown RBP2.47□□□□□ -2.01
MRPL40YPL173W PRR1P28708 518 aa2.47□□□□□ -2.01
MRPL40YPL173W RPC25P35718 212 aa2.47□□□□□ -2.01
MRPL40YPL173W MRPL10P36520 322 aa2.47□□□□□ -2.01
MRPL40YPL173W DSE1P40077 573 aa2.47□□□□□ -2.01
MRPL40YPL173W UTP18P40362 594 aaPredicted RBP2.47□□□□□ -2.01
MRPL40YPL173W GTO1P48239 356 aa2.47□□□□□ -2.01
MRPL40YPL173W SEH1P53011 349 aaKnown RBP2.47□□□□□ -2.01
MRPL40YPL173W YGL242CP53066 181 aa2.47□□□□□ -2.01
MRPL40YPL173W MND1P53102 219 aa2.47□□□□□ -2.01
MRPL40YPL173W PRP38Q00723 242 aaPredicted RBP2.47□□□□□ -2.01
MRPL40YPL173W LAP3Q01532 483 aaKnown RBP RIP-Chip data2.47□□□□□ -2.01not detected
MRPL40YPL173W YET2Q04210 160 aa2.47□□□□□ -2.01
MRPL40YPL173W YOR376WQ08900 122 aa2.47□□□□□ -2.01
MRPL40YPL173W YPR1Q12458 312 aa2.47□□□□□ -2.01
MRPL40YPL173W REP1P03871 373 aa2.46□□□□□ -2.02
MRPL40YPL173W UNG1P12887 359 aa2.46□□□□□ -2.02
MRPL40YPL173W AAT2P23542 418 aaKnown RBP2.46□□□□□ -2.02
MRPL40YPL173W GPI12P23797 304 aa2.46□□□□□ -2.02
MRPL40YPL173W RBK1P25332 333 aa2.46□□□□□ -2.02
MRPL40YPL173W RVS161P25343 265 aaKnown RBP2.46□□□□□ -2.02
MRPL40YPL173W ECT1P33412 323 aa2.46□□□□□ -2.02
MRPL40YPL173W OM14P38325 134 aa2.46□□□□□ -2.02
MRPL40YPL173W TIM17P39515 158 aa2.46□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 43.1 ms