RNA–Protein interactions for RNA: YNL025C

SSN8, Transcript of Cyclin-like component of the RNA polymerase II holoenzyme, yeastyeast

Gene SSN8, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN8YNL025C PSA1P41940 361 aaKnown RBP2.85□□□□□ -1.95
SSN8YNL025C SNG1P46950 547 aa2.85□□□□□ -1.95
SSN8YNL025C TAD2P47058 250 aa2.85□□□□□ -1.95
SSN8YNL025C AZR1P50080 613 aa2.85□□□□□ -1.95
SSN8YNL025C NOP19P53317 196 aaPredicted RBP2.85□□□□□ -1.95
SSN8YNL025C MKC7P53379 596 aa2.85□□□□□ -1.95
SSN8YNL025C YIF1P53845 314 aaKnown RBP2.85□□□□□ -1.95
SSN8YNL025C SED5Q01590 340 aa2.85□□□□□ -1.95
SSN8YNL025C YVH1Q02256 364 aaKnown RBP2.85□□□□□ -1.95
SSN8YNL025C SKI8Q02793 397 aaPredicted RBP2.85□□□□□ -1.95
SSN8YNL025C PLM2Q04383 521 aa2.85□□□□□ -1.95
SSN8YNL025C AIM33Q04516 312 aa2.85□□□□□ -1.95
SSN8YNL025C YML053CQ04978 212 aa2.85□□□□□ -1.95
SSN8YNL025C ORM2Q06144 216 aa2.85□□□□□ -1.95
SSN8YNL025C RSA1Q08932 381 aa2.85□□□□□ -1.95
SSN8YNL025C DDC1Q08949 612 aa2.85□□□□□ -1.95
SSN8YNL025C YPL199CQ08954 240 aa2.85□□□□□ -1.95
SSN8YNL025C YLR049CQ12110 428 aa2.85□□□□□ -1.95
SSN8YNL025C ATG34Q12292 412 aa2.85□□□□□ -1.95
SSN8YNL025C RNH203Q12338 110 aa2.85□□□□□ -1.95
SSN8YNL025C AIM45Q12480 344 aaKnown RBP2.85□□□□□ -1.95
SSN8YNL025C SNF8Q12483 233 aa2.85□□□□□ -1.95
SSN8YNL025C QCR7P00128 127 aa2.84□□□□□ -1.95
SSN8YNL025C STE4P18851 423 aa2.84□□□□□ -1.95
SSN8YNL025C RPO26P20435 155 aa2.84□□□□□ -1.95
SSN8YNL025C RPB8P20436 146 aa2.84□□□□□ -1.95
SSN8YNL025C RNA15P25299 296 aaPredicted RBP2.84□□□□□ -1.95
SSN8YNL025C DCC1P25559 380 aa2.84□□□□□ -1.95
SSN8YNL025C POP5P28005 173 aa2.84□□□□□ -1.95
SSN8YNL025C MEI4P29467 408 aa2.84□□□□□ -1.95
SSN8YNL025C IES6P32617 166 aa2.84□□□□□ -1.95
SSN8YNL025C CDC13P32797 924 aaKnown RBP2.84□□□□□ -1.95
SSN8YNL025C COX13P32799 129 aa2.84□□□□□ -1.95
SSN8YNL025C CSE1P33307 960 aa2.84□□□□□ -1.95
SSN8YNL025C SKN1P33336 771 aa2.84□□□□□ -1.95
SSN8YNL025C DBP7P36120 742 aaKnown RBP2.84□□□□□ -1.95
SSN8YNL025C MRX3P38172 270 aa2.84□□□□□ -1.95
SSN8YNL025C SHG1P38337 142 aa2.84□□□□□ -1.95
SSN8YNL025C RRP4P38792 359 aaKnown RBP2.84□□□□□ -1.95
SSN8YNL025C IKI1P38874 309 aa2.84□□□□□ -1.95
SSN8YNL025C YNL194CP40169 301 aa2.84□□□□□ -1.95
SSN8YNL025C COA1P40452 197 aa2.84□□□□□ -1.95
SSN8YNL025C AIM24P47127 394 aa2.84□□□□□ -1.95
SSN8YNL025C SSN8P47821 323 aa2.84□□□□□ -1.95
SSN8YNL025C YGL204CP53089 101 aa2.84□□□□□ -1.95
SSN8YNL025C YIP4P53093 235 aa2.84□□□□□ -1.95
SSN8YNL025C BIO4P53630 237 aa2.84□□□□□ -1.95
SSN8YNL025C ZRG17P53735 605 aa2.84□□□□□ -1.95
SSN8YNL025C DUG3P53871 357 aa2.84□□□□□ -1.95
SSN8YNL025C STP1Q00947 519 aa2.84□□□□□ -1.95
SSN8YNL025C RPS15Q01855 142 aaKnown RBP2.84□□□□□ -1.95
SSN8YNL025C SNU56Q03782 492 aaKnown RBP2.84□□□□□ -1.95
SSN8YNL025C SMP3Q04174 516 aa2.84□□□□□ -1.95
SSN8YNL025C NAT4Q04751 285 aa2.84□□□□□ -1.95
SSN8YNL025C PBP4Q07362 185 aaKnown RBP2.84□□□□□ -1.95
SSN8YNL025C LCB4Q12246 624 aa2.84□□□□□ -1.95
SSN8YNL025C TPT1Q12272 230 aaKnown RBP2.84□□□□□ -1.95
SSN8YNL025C YOR338WQ99326 363 aa2.84□□□□□ -1.95
SSN8YNL025C IZH4Q99393 312 aa2.84□□□□□ -1.95
SSN8YNL025C ATP6P00854 259 aa2.83□□□□□ -1.96
SSN8YNL025C SPO12P17123 173 aa2.83□□□□□ -1.96
SSN8YNL025C TYR1P20049 452 aa2.83□□□□□ -1.96
SSN8YNL025C TKL1P23254 680 aaKnown RBP2.83□□□□□ -1.96
SSN8YNL025C GIT1P25346 518 aa2.83□□□□□ -1.96
SSN8YNL025C TRR1P29509 319 aaKnown RBP2.83□□□□□ -1.96
SSN8YNL025C MRPS5P33759 307 aa2.83□□□□□ -1.96
SSN8YNL025C YKL063CP35725 167 aa2.83□□□□□ -1.96
SSN8YNL025C YKL162CP36052 402 aa2.83□□□□□ -1.96
SSN8YNL025C YPT10P38146 199 aa2.83□□□□□ -1.96
SSN8YNL025C PRS2P38620 318 aaKnown RBP2.83□□□□□ -1.96
SSN8YNL025C ANS1P38832 159 aa2.83□□□□□ -1.96
SSN8YNL025C RBG1P39729 369 aa2.83□□□□□ -1.96
SSN8YNL025C YER184CP39961 794 aa2.83□□□□□ -1.96
SSN8YNL025C RSM25P40496 264 aa2.83□□□□□ -1.96
SSN8YNL025C ICE2P40499 491 aa2.83□□□□□ -1.96
SSN8YNL025C YJL016WP47072 561 aa2.83□□□□□ -1.96
SSN8YNL025C YJR141WP47172 347 aaPredicted RBP2.83□□□□□ -1.96
SSN8YNL025C VMA10P48836 114 aaKnown RBP2.83□□□□□ -1.96
SSN8YNL025C NAS6P50086 228 aa2.83□□□□□ -1.96
SSN8YNL025C UBP8P50102 471 aa2.83□□□□□ -1.96
SSN8YNL025C CWC23P52868 283 aaPredicted RBP2.83□□□□□ -1.96
SSN8YNL025C PKP2P53170 491 aa2.83□□□□□ -1.96
SSN8YNL025C OKP1P53298 406 aa2.83□□□□□ -1.96
SSN8YNL025C YIP3P53633 176 aa2.83□□□□□ -1.96
SSN8YNL025C CWC25P53854 179 aaKnown RBP2.83□□□□□ -1.96
SSN8YNL025C PFA5Q03289 374 aa2.83□□□□□ -1.96
SSN8YNL025C YDR387CQ04162 555 aa2.83□□□□□ -1.96
SSN8YNL025C YEH2Q07950 538 aa2.83□□□□□ -1.96
SSN8YNL025C PLB3Q08108 686 aa2.83□□□□□ -1.96
SSN8YNL025C YPQ1Q12010 308 aa2.83□□□□□ -1.96
SSN8YNL025C YPR022CQ12139 1133 aa2.83□□□□□ -1.96
SSN8YNL025C NCE102Q12207 173 aaRIP-Chip data2.83□□□□□ -1.96not detected
SSN8YNL025C NOT5Q12514 560 aaPredicted RBP2.83□□□□□ -1.96
SSN8YNL025C YKL183C-AQ3E765 70 aa2.83□□□□□ -1.96
SSN8YNL025C LSO2Q3E772 92 aaKnown RBP2.83□□□□□ -1.96
SSN8YNL025C OPI3P05375 206 aa2.82□□□□□ -1.96
SSN8YNL025C RPS28BP0C0X0 67 aaKnown RBP2.82□□□□□ -1.96
SSN8YNL025C APE2P32454 952 aaKnown RBP2.82□□□□□ -1.96
SSN8YNL025C ZRT1P32804 376 aa2.82□□□□□ -1.96
SSN8YNL025C VAM7P32912 316 aa2.82□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 10.1 ms