RNA–Protein interactions for RNA: YML097C

VPS9, Transcript of Guanine nucleotide exchange factor (GEF), yeastyeast

Gene VPS9, Length 1,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS9YML097C UBA3Q99344 299 aa2.87□□□□□ -1.95
VPS9YML097C RPL24AP04449 155 aaKnown RBP2.87□□□□□ -1.95
VPS9YML097C RPS14AP06367 137 aaKnown RBP2.87□□□□□ -1.95
VPS9YML097C RSR1P13856 272 aa2.87□□□□□ -1.95
VPS9YML097C YSR3P23501 404 aa2.87□□□□□ -1.95
VPS9YML097C ERG9P29704 444 aa2.87□□□□□ -1.95
VPS9YML097C MEI5P32489 222 aa2.87□□□□□ -1.95
VPS9YML097C SPO23P33757 523 aa2.87□□□□□ -1.95
VPS9YML097C SWD2P36104 329 aaPredicted RBP2.87□□□□□ -1.95
VPS9YML097C RPS14BP39516 138 aaKnown RBP2.87□□□□□ -1.95
VPS9YML097C LIA1P47120 325 aaKnown RBP2.87□□□□□ -1.95
VPS9YML097C LSC1P53598 329 aaKnown RBP2.87□□□□□ -1.95
VPS9YML097C YNL134CP53912 376 aaKnown RBP2.87□□□□□ -1.95
VPS9YML097C MTQ1P53944 314 aa2.87□□□□□ -1.95
VPS9YML097C SPP2Q02521 185 aa2.87□□□□□ -1.95
VPS9YML097C RTN1Q04947 295 aaKnown RBP2.87□□□□□ -1.95
VPS9YML097C HNT3Q08702 217 aa2.87□□□□□ -1.95
VPS9YML097C DDC1Q08949 612 aa2.87□□□□□ -1.95
VPS9YML097C BTS1Q12051 335 aa2.87□□□□□ -1.95
VPS9YML097C SGT2Q12118 346 aaKnown RBP2.87□□□□□ -1.95
VPS9YML097C YCL021W-AQ96VH3 125 aa2.87□□□□□ -1.95
VPS9YML097C SSK22P25390 1331 aaPredicted RBP2.86□□□□□ -1.95
VPS9YML097C ACB1P31787 87 aa2.86□□□□□ -1.95
VPS9YML097C COY1P34237 679 aa2.86□□□□□ -1.95
VPS9YML097C YKR015CP36111 568 aa2.86□□□□□ -1.95
VPS9YML097C AVT5P38176 459 aa2.86□□□□□ -1.95
VPS9YML097C HIS2P38635 335 aa2.86□□□□□ -1.95
VPS9YML097C YGR210CP42942 411 aa2.86□□□□□ -1.95
VPS9YML097C COX16P47081 118 aa2.86□□□□□ -1.95
VPS9YML097C YJR085CP47131 105 aaKnown RBP2.86□□□□□ -1.95
VPS9YML097C LSG1P53145 640 aaKnown RBP2.86□□□□□ -1.95
VPS9YML097C MTM1P53320 366 aa2.86□□□□□ -1.95
VPS9YML097C CWC25P53854 179 aaKnown RBP2.86□□□□□ -1.95
VPS9YML097C REX2P54964 269 aaKnown RBP2.86□□□□□ -1.95
VPS9YML097C IRC4Q03036 179 aa2.86□□□□□ -1.95
VPS9YML097C UBX2Q04228 584 aa2.86□□□□□ -1.95
VPS9YML097C BCP1Q06338 283 aa2.86□□□□□ -1.95
VPS9YML097C YDL109CQ12103 647 aa2.86□□□□□ -1.95
VPS9YML097C YGK3Q12222 375 aaPredicted RBP2.86□□□□□ -1.95
VPS9YML097C SPS100P13130 326 aa2.85□□□□□ -1.95
VPS9YML097C DCC1P25559 380 aa2.85□□□□□ -1.95
VPS9YML097C IMP3P32899 183 aaPredicted RBP2.85□□□□□ -1.95
VPS9YML097C SKG6P32900 734 aaPredicted RBP2.85□□□□□ -1.95
VPS9YML097C PTH1P38876 190 aaKnown RBP2.85□□□□□ -1.95
VPS9YML097C IDP2P41939 412 aa2.85□□□□□ -1.95
VPS9YML097C BNA6P43619 295 aa2.85□□□□□ -1.95
VPS9YML097C CIN2P46670 268 aa2.85□□□□□ -1.95
VPS9YML097C FMP33P46998 180 aa2.85□□□□□ -1.95
VPS9YML097C MRX5P47007 382 aa2.85□□□□□ -1.95
VPS9YML097C OKP1P53298 406 aa2.85□□□□□ -1.95
VPS9YML097C BIO4P53630 237 aa2.85□□□□□ -1.95
VPS9YML097C GRX3Q03835 250 aa2.85□□□□□ -1.95
VPS9YML097C COX20Q04935 205 aa2.85□□□□□ -1.95
VPS9YML097C YLR173WQ06247 608 aa2.85□□□□□ -1.95
VPS9YML097C RLP24Q07915 199 aaKnown RBP2.85□□□□□ -1.95
VPS9YML097C PPT2Q12036 173 aa2.85□□□□□ -1.95
VPS9YML097C POM33Q12164 279 aa2.85□□□□□ -1.95
VPS9YML097C TDH3P00359 332 aaKnown RBP RIP-Chip data2.84□□□□□ -1.96not detected
VPS9YML097C RPS8AP0CX39 200 aaKnown RBP2.84□□□□□ -1.96
VPS9YML097C RPS8BP0CX40 200 aaKnown RBP2.84□□□□□ -1.96
VPS9YML097C RPL23AP0CX41 137 aaKnown RBP2.84□□□□□ -1.96
VPS9YML097C RPL23BP0CX42 137 aaKnown RBP2.84□□□□□ -1.96
VPS9YML097C VPS1P21576 704 aaKnown RBP2.84□□□□□ -1.96
VPS9YML097C DAL2P25335 343 aa2.84□□□□□ -1.96
VPS9YML097C RVS161P25343 265 aaKnown RBP2.84□□□□□ -1.96
VPS9YML097C YHR045WP38775 560 aa2.84□□□□□ -1.96
VPS9YML097C CTM1P38818 585 aa2.84□□□□□ -1.96
VPS9YML097C TDA11P38854 504 aa2.84□□□□□ -1.96
VPS9YML097C SLM1P40485 686 aa2.84□□□□□ -1.96
VPS9YML097C EGT2P42835 1041 aa2.84□□□□□ -1.96
VPS9YML097C LSB1P53281 241 aa2.84□□□□□ -1.96
VPS9YML097C CWC22P53333 577 aaKnown RBP2.84□□□□□ -1.96
VPS9YML097C MKC7P53379 596 aa2.84□□□□□ -1.96
VPS9YML097C SED5Q01590 340 aa2.84□□□□□ -1.96
VPS9YML097C PBA1Q05778 276 aa2.84□□□□□ -1.96
VPS9YML097C RIF2Q06208 395 aa2.84□□□□□ -1.96
VPS9YML097C CFT1Q06632 1357 aaKnown RBP2.84□□□□□ -1.96
VPS9YML097C ALE1Q08548 619 aa2.84□□□□□ -1.96
VPS9YML097C YDL199CQ12407 687 aa2.84□□□□□ -1.96
VPS9YML097C YER078W-AQ3E7A2 54 aa2.84□□□□□ -1.96
VPS9YML097C HEM4P06174 275 aa2.83□□□□□ -1.96
VPS9YML097C RPS18AP0CX55 146 aaKnown RBP2.83□□□□□ -1.96
VPS9YML097C RPS18BP0CX56 146 aaPredicted RBP2.83□□□□□ -1.96
VPS9YML097C MSI1P13712 422 aa2.83□□□□□ -1.96
VPS9YML097C CSE2P33308 149 aa2.83□□□□□ -1.96
VPS9YML097C SDH3P33421 198 aa2.83□□□□□ -1.96
VPS9YML097C YNL208WP40159 199 aaKnown RBP2.83□□□□□ -1.96
VPS9YML097C AGP3P43548 558 aa2.83□□□□□ -1.96
VPS9YML097C MST27P53176 234 aa2.83□□□□□ -1.96
VPS9YML097C SHY1P53266 389 aa2.83□□□□□ -1.96
VPS9YML097C CTS2Q06350 511 aa2.83□□□□□ -1.96
VPS9YML097C GPN3Q06543 272 aa2.83□□□□□ -1.96
VPS9YML097C BER1Q06688 274 aaKnown RBP2.83□□□□□ -1.96
VPS9YML097C ASR1Q06834 288 aa2.83□□□□□ -1.96
VPS9YML097C BSC6Q08280 497 aa2.83□□□□□ -1.96
VPS9YML097C APC9Q12107 265 aa2.83□□□□□ -1.96
VPS9YML097C RBD2Q12270 262 aa2.83□□□□□ -1.96
VPS9YML097C MED4Q12343 284 aa2.83□□□□□ -1.96
VPS9YML097C HMS1Q12398 434 aa2.83□□□□□ -1.96
VPS9YML097C FRS2P15625 503 aaKnown RBP2.82□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms