RNA–Protein interactions for RNA: YKR020W

VPS51, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS51, Length 495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS51YKR020W BRF1P29056 596 aa2.33□□□□□ -2.04
VPS51YKR020W SMI1P32566 505 aa2.33□□□□□ -2.04
VPS51YKR020W LTV1P34078 463 aa2.33□□□□□ -2.04
VPS51YKR020W CSG2P35206 410 aa2.33□□□□□ -2.04
VPS51YKR020W HMT1P38074 348 aa2.33□□□□□ -2.04
VPS51YKR020W SMC2P38989 1170 aaKnown RBP2.33□□□□□ -2.04
VPS51YKR020W YAL037WP39728 267 aa2.33□□□□□ -2.04
VPS51YKR020W MIG3P39943 394 aa2.33□□□□□ -2.04
VPS51YKR020W SER3P40054 469 aa2.33□□□□□ -2.04
VPS51YKR020W MMF1P40185 145 aaKnown RBP2.33□□□□□ -2.04
VPS51YKR020W DFG10P40526 253 aa2.33□□□□□ -2.04
VPS51YKR020W CWC22P53333 577 aaKnown RBP2.33□□□□□ -2.04
VPS51YKR020W NOP13P53883 403 aaKnown RBP RIP-Chip data2.33□□□□□ -2.04not detected
VPS51YKR020W APJ1P53940 528 aa2.33□□□□□ -2.04
VPS51YKR020W OCA2P53949 197 aa2.33□□□□□ -2.04
VPS51YKR020W MZM1Q03429 123 aaPredicted RBP2.33□□□□□ -2.04
VPS51YKR020W TAF12Q03761 539 aa2.33□□□□□ -2.04
VPS51YKR020W YDR034W-BQ6Q5X2 51 aa2.33□□□□□ -2.04
VPS51YKR020W AI5_BETAQ9ZZX0 354 aa2.33□□□□□ -2.04
VPS51YKR020W IMA3P0CW40 589 aa2.32□□□□□ -2.04
VPS51YKR020W IMA4P0CW41 589 aa2.32□□□□□ -2.04
VPS51YKR020W ADH5P38113 351 aaKnown RBP2.32□□□□□ -2.04
VPS51YKR020W SIF2P38262 535 aa2.32□□□□□ -2.04
VPS51YKR020W SHE3P38272 425 aaKnown RBP2.32□□□□□ -2.04
VPS51YKR020W SBE22P38814 852 aa2.32□□□□□ -2.04
VPS51YKR020W COX14P39103 70 aa2.32□□□□□ -2.04
VPS51YKR020W SHQ1P40486 507 aaPredicted RBP2.32□□□□□ -2.04
VPS51YKR020W YJR054WP47114 497 aa2.32□□□□□ -2.04
VPS51YKR020W GPI8P49018 411 aa2.32□□□□□ -2.04
VPS51YKR020W MND1P53102 219 aa2.32□□□□□ -2.04
VPS51YKR020W SKO1Q02100 647 aa2.32□□□□□ -2.04
VPS51YKR020W HOT1Q03213 719 aa2.32□□□□□ -2.04
VPS51YKR020W ACL4Q03771 387 aa2.32□□□□□ -2.04
VPS51YKR020W PRM6Q04705 352 aa2.32□□□□□ -2.04
VPS51YKR020W IMA2Q08295 589 aa2.32□□□□□ -2.04
VPS51YKR020W RKM1Q08961 583 aaPredicted RBP2.32□□□□□ -2.04
VPS51YKR020W TAF10Q12030 206 aa2.32□□□□□ -2.04
VPS51YKR020W YDL012CQ12489 107 aa2.32□□□□□ -2.04
VPS51YKR020W VPS13Q07878 3144 aa2.32□□□□□ -2.04
VPS51YKR020W CCH1P50077 2039 aa2.31□□□□□ -2.04
VPS51YKR020W JIP3O13555 125 aa2.31□□□□□ -2.04
VPS51YKR020W RPL1AP0CX43 217 aaKnown RBP2.31□□□□□ -2.04
VPS51YKR020W RPL1BP0CX44 217 aaKnown RBP2.31□□□□□ -2.04
VPS51YKR020W PHO84P25297 587 aaKnown RBP2.31□□□□□ -2.04
VPS51YKR020W YCL068CP25593 260 aa2.31□□□□□ -2.04
VPS51YKR020W TKL2P33315 681 aa2.31□□□□□ -2.04
VPS51YKR020W KDX1P36005 433 aa2.31□□□□□ -2.04
VPS51YKR020W PCH2P38126 564 aa2.31□□□□□ -2.04
VPS51YKR020W RTC2P38279 296 aa2.31□□□□□ -2.04
VPS51YKR020W YSW1P38280 609 aa2.31□□□□□ -2.04
VPS51YKR020W WSS1P38838 269 aa2.31□□□□□ -2.04
VPS51YKR020W FAD1P38913 306 aa2.31□□□□□ -2.04
VPS51YKR020W YEL075CP39972 122 aa2.31□□□□□ -2.04
VPS51YKR020W DSE1P40077 573 aa2.31□□□□□ -2.04
VPS51YKR020W MEP1P40260 492 aa2.31□□□□□ -2.04
VPS51YKR020W ASG7P46993 209 aa2.31□□□□□ -2.04
VPS51YKR020W BIR1P47134 954 aa2.31□□□□□ -2.04
VPS51YKR020W ARO80Q04052 950 aa2.31□□□□□ -2.04
VPS51YKR020W YMR130WQ04223 302 aa2.31□□□□□ -2.04
VPS51YKR020W DCS1Q06151 350 aa2.31□□□□□ -2.04
VPS51YKR020W RIF2Q06208 395 aa2.31□□□□□ -2.04
VPS51YKR020W NDE2Q07500 545 aa2.31□□□□□ -2.04
VPS51YKR020W PML1Q07930 204 aaPredicted RBP2.31□□□□□ -2.04
VPS51YKR020W UAF30Q08747 228 aa2.31□□□□□ -2.04
VPS51YKR020W DDC1Q08949 612 aa2.31□□□□□ -2.04
VPS51YKR020W GPM2Q12008 311 aa2.31□□□□□ -2.04
VPS51YKR020W REX3Q12090 404 aa2.31□□□□□ -2.04
VPS51YKR020W EMP46Q12396 444 aa2.31□□□□□ -2.04
VPS51YKR020W SKS1Q12505 502 aa2.31□□□□□ -2.04
VPS51YKR020W RPS3P05750 240 aaKnown RBP2.3□□□□□ -2.04
VPS51YKR020W AAT2P23542 418 aaKnown RBP2.3□□□□□ -2.04
VPS51YKR020W IES6P32617 166 aa2.3□□□□□ -2.04
VPS51YKR020W SPT10P35208 640 aa2.3□□□□□ -2.04
VPS51YKR020W OXA1P39952 402 aa2.3□□□□□ -2.04
VPS51YKR020W AVT2P39981 480 aa2.3□□□□□ -2.04
VPS51YKR020W SEC9P40357 651 aa2.3□□□□□ -2.04
VPS51YKR020W MOB1P40484 314 aa2.3□□□□□ -2.04
VPS51YKR020W LCB3P47013 409 aa2.3□□□□□ -2.04
VPS51YKR020W MRM2P53123 320 aa2.3□□□□□ -2.04
VPS51YKR020W HOP2P53187 214 aa2.3□□□□□ -2.04
VPS51YKR020W CCE1Q03702 353 aa2.3□□□□□ -2.04
VPS51YKR020W YDR222WQ04925 415 aa2.3□□□□□ -2.04
VPS51YKR020W AEP3Q12089 606 aa2.3□□□□□ -2.04
VPS51YKR020W TPT1Q12272 230 aaKnown RBP2.3□□□□□ -2.04
VPS51YKR020W JID1Q12350 301 aa2.3□□□□□ -2.04
VPS51YKR020W TAO3P40468 2376 aa2.3□□□□□ -2.04
VPS51YKR020W PAB1P04147 577 aaKnown RBP RIP-Chip data2.29□□□□□ -2.04 RIP-Chip
VPS51YKR020W DAP2P18962 818 aa2.29□□□□□ -2.04
VPS51YKR020W PEX34P25584 144 aa2.29□□□□□ -2.04
VPS51YKR020W GEX1P25596 615 aa2.29□□□□□ -2.04
VPS51YKR020W SRB2P34162 210 aa2.29□□□□□ -2.04
VPS51YKR020W COY1P34237 679 aa2.29□□□□□ -2.04
VPS51YKR020W MID2P36027 376 aa2.29□□□□□ -2.04
VPS51YKR020W DAD2P36162 133 aa2.29□□□□□ -2.04
VPS51YKR020W ZTA1P38230 334 aaKnown RBP2.29□□□□□ -2.04
VPS51YKR020W FHL1P39521 936 aa2.29□□□□□ -2.04
VPS51YKR020W YER189WP40104 122 aa2.29□□□□□ -2.04
VPS51YKR020W BTT1P40314 149 aaPredicted RBP2.29□□□□□ -2.04
VPS51YKR020W SNZ3P43545 298 aa2.29□□□□□ -2.04
VPS51YKR020W YFR057WP43625 151 aa2.29□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms